FFCP PHASE1:Hg19::chr1:2179370..2179409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6497 | |EntrezGene=6497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10896 | |HGNC=10896 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000478223_5end | |association_with_transcript=-25bp_to_ENST00000478223_5end | ||
|cluster_id=chr1:2179370..2179409,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_SKI_5end | |description=CAGE_peak_16_at_SKI_5end | ||
|id=chr1:2179370..2179409,+ | |id=chr1:2179370..2179409,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.92e-15!12;CL:0000417!4.92e-15!12;CL:0000668!4.92e-15!12;CL:0000414!4.92e-15!12;CL:0000412!4.92e-15!12;CL:0000182!4.92e-15!12;CL:0002605!2.76e-07!3;CL:0000128!8.95e-07!7;CL:0000126!8.95e-07!7;CL:0000127!8.95e-07!7;CL:0002453!8.95e-07!7 | |ontology_enrichment_celltype=CL:0000181!4.92e-15!12;CL:0000417!4.92e-15!12;CL:0000668!4.92e-15!12;CL:0000414!4.92e-15!12;CL:0000412!4.92e-15!12;CL:0000182!4.92e-15!12;CL:0002605!2.76e-07!3;CL:0000128!8.95e-07!7;CL:0000126!8.95e-07!7;CL:0000127!8.95e-07!7;CL:0002453!8.95e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.89e-22;12!CL:0002363;2.74e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.89e-22,12;CL:0002363,2.74e-15,2;CL:0000008,2.74e-15,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.56e-12!19;UBERON:0006925!1.56e-12!19;UBERON:0008836!1.56e-12!19;UBERON:0005057!1.96e-11!26;UBERON:0008835!1.09e-10!22;UBERON:0003894!1.09e-10!22;UBERON:0009854!3.51e-10!23;UBERON:0007023!1.27e-09!115;UBERON:0002365!1.77e-09!31;UBERON:0002330!1.77e-09!31;UBERON:0007499!2.74e-09!25;UBERON:0009497!2.74e-09!25;UBERON:0000015!2.74e-09!25;UBERON:0002423!2.74e-09!25;UBERON:0006235!2.74e-09!25;UBERON:0004161!2.74e-09!25;UBERON:0009856!6.81e-09!26;UBERON:0002530!2.89e-08!59;UBERON:0002368!3.65e-08!35;UBERON:0006947!7.14e-08!3;UBERON:0004054!7.14e-08!3;UBERON:0005172!1.85e-07!55;UBERON:0005173!1.85e-07!55;UBERON:0003135!1.87e-07!11 | |ontology_enrichment_uberon=UBERON:0002107!1.56e-12!19;UBERON:0006925!1.56e-12!19;UBERON:0008836!1.56e-12!19;UBERON:0005057!1.96e-11!26;UBERON:0008835!1.09e-10!22;UBERON:0003894!1.09e-10!22;UBERON:0009854!3.51e-10!23;UBERON:0007023!1.27e-09!115;UBERON:0002365!1.77e-09!31;UBERON:0002330!1.77e-09!31;UBERON:0007499!2.74e-09!25;UBERON:0009497!2.74e-09!25;UBERON:0000015!2.74e-09!25;UBERON:0002423!2.74e-09!25;UBERON:0006235!2.74e-09!25;UBERON:0004161!2.74e-09!25;UBERON:0009856!6.81e-09!26;UBERON:0002530!2.89e-08!59;UBERON:0002368!3.65e-08!35;UBERON:0006947!7.14e-08!3;UBERON:0004054!7.14e-08!3;UBERON:0005172!1.85e-07!55;UBERON:0005173!1.85e-07!55;UBERON:0003135!1.87e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.31e-24;19!UBERON:0006925;2.31e-24;19!UBERON:0002423;1.14e-18;25!UBERON:0002365;1.18e-15;31!UBERON:0002330;1.18e-15;31!UBERON:0003566;2.74e-15;2!UBERON:0001777;2.74e-15;2!UBERON:0002368;1.23e-12;33!UBERON:0000949;1.25e-10;43!UBERON:0003891;2.61e-08;4!UBERON:0000964;2.61e-08;4!UBERON:0010409;2.61e-08;4!UBERON:0005172;7.00e-08;52!UBERON:0005173;7.00e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.31e-24,19;UBERON:0006925,2.31e-24,19;UBERON:0008836,2.31e-24,19;UBERON:0008835,3.95e-21,22;UBERON:0003894,3.95e-21,22;UBERON:0009854,3.07e-20,23;UBERON:0007499,1.14e-18,25;UBERON:0009497,1.14e-18,25;UBERON:0000015,1.14e-18,25;UBERON:0002423,1.14e-18,25;UBERON:0006235,1.14e-18,25;UBERON:0004161,1.14e-18,25;UBERON:0009856,5.65e-18,26;UBERON:0003566,2.74e-15,2;UBERON:0001777,2.74e-15,2;UBERON:0002365,3.61e-15,31;UBERON:0002330,3.61e-15,31;UBERON:0002368,1.69e-13,35;UBERON:0000949,1.30e-10,45;UBERON:0003929,6.41e-09,54;UBERON:0005172,6.41e-09,54;UBERON:0005173,6.41e-09,54;UBERON:0003891,2.61e-08,4;UBERON:0000964,2.61e-08,4;UBERON:0010409,2.61e-08,4;UBERON:0004348,2.61e-08,4;UBERON:0005427,2.61e-08,4;UBERON:0002530,3.36e-08,59;UBERON:0002417,4.53e-08,60;UBERON:0000916,4.53e-08,60 | |||
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|short_description=p16@SKI | |short_description=p16@SKI | ||
}} | }} |
Latest revision as of 04:18, 25 September 2015
Short description: | p16@SKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SKI_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -25bp_to_ENST00000478223_5end |
EntrezGene: | SKI |
HGNC: | 10896 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.89e-22 | 12 |
keratocyte | 2.74e-15 | 2 |
migratory cranial neural crest cell | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.31e-24 | 19 |
digestive gland | 2.31e-24 | 19 |
liver bud | 2.31e-24 | 19 |
hepatic diverticulum | 3.95e-21 | 22 |
liver primordium | 3.95e-21 | 22 |
digestive tract diverticulum | 3.07e-20 | 23 |
epithelial sac | 1.14e-18 | 25 |
epithelium of foregut-midgut junction | 1.14e-18 | 25 |
anatomical boundary | 1.14e-18 | 25 |
hepatobiliary system | 1.14e-18 | 25 |
foregut-midgut junction | 1.14e-18 | 25 |
septum transversum | 1.14e-18 | 25 |
sac | 5.65e-18 | 26 |
head connective tissue | 2.74e-15 | 2 |
substantia propria of cornea | 2.74e-15 | 2 |
exocrine gland | 3.61e-15 | 31 |
exocrine system | 3.61e-15 | 31 |
endocrine gland | 1.69e-13 | 35 |
endocrine system | 1.30e-10 | 45 |
gut epithelium | 6.41e-09 | 54 |
abdomen element | 6.41e-09 | 54 |
abdominal segment element | 6.41e-09 | 54 |
stroma | 2.61e-08 | 4 |
cornea | 2.61e-08 | 4 |
eye surface | 2.61e-08 | 4 |
optic eminence | 2.61e-08 | 4 |
corneal primordium | 2.61e-08 | 4 |
gland | 3.36e-08 | 59 |
abdominal segment of trunk | 4.53e-08 | 60 |
abdomen | 4.53e-08 | 60 |