FFCP PHASE1:Hg19::chr3:145878962..145878979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5352 | |EntrezGene=5352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9082 | |HGNC=9082 | ||
|TSSclassifier=strong | |||
|UniProt=O00469 | |UniProt=O00469 | ||
|association_with_transcript=-8bp_to_ENST00000282903,ENST00000360060_5end | |association_with_transcript=-8bp_to_ENST00000282903,ENST00000360060_5end | ||
|cluster_id=chr3:145878962..145878979,- | |||
|coexpression_cluster_id=C1512 | |||
|description=CAGE_peak_1_at_PLOD2_5end | |description=CAGE_peak_1_at_PLOD2_5end | ||
|id=chr3:145878962..145878979,- | |id=chr3:145878962..145878979,- | ||
|ontology_enrichment_celltype=CL:0000055!5.50e-30!180;CL:0000222!3.20e-24!119;CL:0000680!1.08e-20!57;CL:0000056!1.08e-20!57;CL:0000355!1.08e-20!57;CL:0000220!3.04e-19!246;CL:0000187!4.63e-19!54;CL:0002321!1.03e-18!248;CL:0000183!5.83e-17!59;CL:0000359!6.80e-17!32;CL:0000192!2.36e-16!42;CL:0000514!2.36e-16!42;CL:0000393!5.31e-16!60;CL:0000211!5.31e-16!60;CL:0000057!4.97e-13!75;CL:0002494!8.05e-07!16 | |ontology_enrichment_celltype=CL:0000055!5.50e-30!180;CL:0000222!3.20e-24!119;CL:0000680!1.08e-20!57;CL:0000056!1.08e-20!57;CL:0000355!1.08e-20!57;CL:0000220!3.04e-19!246;CL:0000187!4.63e-19!54;CL:0002321!1.03e-18!248;CL:0000183!5.83e-17!59;CL:0000359!6.80e-17!32;CL:0000192!2.36e-16!42;CL:0000514!2.36e-16!42;CL:0000393!5.31e-16!60;CL:0000211!5.31e-16!60;CL:0000057!4.97e-13!75;CL:0002494!8.05e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.03e-16;32!CL:0000192;5.03e-12;43!CL:0000187;8.65e-11;55!CL:0000393;2.59e-08;61!CL:0000211;2.59e-08;61!CL:0000134;1.46e-07;55!CL:0000723;6.50e-07;61!CL:0002494;7.66e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.66e-24,121;CL:0000680,8.94e-21,58;CL:0000056,8.94e-21,58;CL:0000355,8.94e-21,58;CL:0000187,3.86e-19,55;CL:0002321,9.05e-19,250;CL:0000359,5.95e-17,32;CL:0000192,2.10e-16,43;CL:0000514,2.10e-16,43;CL:0000393,4.19e-16,61;CL:0000211,4.19e-16,61;CL:0000057,1.34e-13,76;CL:0002494,7.68e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;5.03e-12;43!CL:0000355;6.97e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!3.88e-08!14 | |ontology_enrichment_disease=DOID:2394!3.88e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.78e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.67e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000490!3.20e-24!138;UBERON:0005256!1.01e-22!143;UBERON:0000914!7.27e-22!83;UBERON:0002329!7.27e-22!83;UBERON:0003077!7.27e-22!83;UBERON:0003059!7.27e-22!83;UBERON:0007282!7.27e-22!83;UBERON:0009618!7.27e-22!83;UBERON:0007285!7.27e-22!83;UBERON:0003914!4.86e-21!118;UBERON:0002049!8.65e-21!79;UBERON:0007798!8.65e-21!79;UBERON:0004872!2.06e-19!84;UBERON:0002100!5.59e-19!216;UBERON:0001981!6.34e-19!60;UBERON:0007500!6.34e-19!60;UBERON:0004537!6.34e-19!60;UBERON:0006965!6.34e-19!60;UBERON:0004290!8.80e-19!70;UBERON:0000055!9.89e-19!69;UBERON:0001134!1.68e-18!61;UBERON:0002036!1.68e-18!61;UBERON:0003082!1.68e-18!61;UBERON:0002385!1.99e-18!63;UBERON:0001015!1.99e-18!63;UBERON:0000383!1.99e-18!63;UBERON:0001637!6.05e-18!42;UBERON:0003509!6.05e-18!42;UBERON:0004572!6.05e-18!42;UBERON:0000486!7.78e-18!82;UBERON:0000481!1.88e-17!347;UBERON:0000475!2.03e-16!365;UBERON:0004535!3.36e-16!110;UBERON:0000477!6.26e-16!286;UBERON:0003104!6.44e-16!238;UBERON:0009142!6.44e-16!238;UBERON:0000119!8.95e-16!312;UBERON:0004573!1.11e-15!33;UBERON:0004571!1.11e-15!33;UBERON:0000483!1.25e-15!309;UBERON:0001009!1.27e-15!113;UBERON:0000468!2.16e-13!659;UBERON:0004111!1.61e-12!241;UBERON:0000025!1.89e-10!194;UBERON:0000467!2.49e-10!625;UBERON:0000480!4.81e-10!626;UBERON:0000947!5.17e-09!21;UBERON:0010191!5.17e-09!21;UBERON:0002050!2.19e-07!605;UBERON:0005423!2.19e-07!605;UBERON:0000923!2.41e-07!604;UBERON:0005291!2.41e-07!604;UBERON:0006598!2.41e-07!604;UBERON:0002532!2.41e-07!604;UBERON:0000922!2.47e-07!612;UBERON:0000926!3.12e-07!448;UBERON:0004120!3.12e-07!448;UBERON:0006603!3.12e-07!448;UBERON:0001135!3.84e-07!15 | |ontology_enrichment_uberon=UBERON:0000490!3.20e-24!138;UBERON:0005256!1.01e-22!143;UBERON:0000914!7.27e-22!83;UBERON:0002329!7.27e-22!83;UBERON:0003077!7.27e-22!83;UBERON:0003059!7.27e-22!83;UBERON:0007282!7.27e-22!83;UBERON:0009618!7.27e-22!83;UBERON:0007285!7.27e-22!83;UBERON:0003914!4.86e-21!118;UBERON:0002049!8.65e-21!79;UBERON:0007798!8.65e-21!79;UBERON:0004872!2.06e-19!84;UBERON:0002100!5.59e-19!216;UBERON:0001981!6.34e-19!60;UBERON:0007500!6.34e-19!60;UBERON:0004537!6.34e-19!60;UBERON:0006965!6.34e-19!60;UBERON:0004290!8.80e-19!70;UBERON:0000055!9.89e-19!69;UBERON:0001134!1.68e-18!61;UBERON:0002036!1.68e-18!61;UBERON:0003082!1.68e-18!61;UBERON:0002385!1.99e-18!63;UBERON:0001015!1.99e-18!63;UBERON:0000383!1.99e-18!63;UBERON:0001637!6.05e-18!42;UBERON:0003509!6.05e-18!42;UBERON:0004572!6.05e-18!42;UBERON:0000486!7.78e-18!82;UBERON:0000481!1.88e-17!347;UBERON:0000475!2.03e-16!365;UBERON:0004535!3.36e-16!110;UBERON:0000477!6.26e-16!286;UBERON:0003104!6.44e-16!238;UBERON:0009142!6.44e-16!238;UBERON:0000119!8.95e-16!312;UBERON:0004573!1.11e-15!33;UBERON:0004571!1.11e-15!33;UBERON:0000483!1.25e-15!309;UBERON:0001009!1.27e-15!113;UBERON:0000468!2.16e-13!659;UBERON:0004111!1.61e-12!241;UBERON:0000025!1.89e-10!194;UBERON:0000467!2.49e-10!625;UBERON:0000480!4.81e-10!626;UBERON:0000947!5.17e-09!21;UBERON:0010191!5.17e-09!21;UBERON:0002050!2.19e-07!605;UBERON:0005423!2.19e-07!605;UBERON:0000923!2.41e-07!604;UBERON:0005291!2.41e-07!604;UBERON:0006598!2.41e-07!604;UBERON:0002532!2.41e-07!604;UBERON:0000922!2.47e-07!612;UBERON:0000926!3.12e-07!448;UBERON:0004120!3.12e-07!448;UBERON:0006603!3.12e-07!448;UBERON:0001135!3.84e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.48e-14;33!UBERON:0004571;2.48e-14;33!UBERON:0001637;3.10e-13;42!UBERON:0003509;3.10e-13;42!UBERON:0004572;3.10e-13;42!UBERON:0007500;4.12e-10;56!UBERON:0001981;4.12e-10;56!UBERON:0004537;4.12e-10;56!UBERON:0000055;4.66e-09;65!UBERON:0000947;4.83e-09;21!UBERON:0010191;4.83e-09;21!UBERON:0002049;2.43e-08;75!UBERON:0007798;2.43e-08;75!UBERON:0002385;3.87e-08;31!UBERON:0001015;3.87e-08;31!UBERON:0000383;3.87e-08;31!UBERON:0001135;3.67e-07;15 | |||
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| ||
|short_description=p1@PLOD2 | |short_description=p1@PLOD2 | ||
}} | }} |
Latest revision as of 06:21, 25 September 2015
Short description: | p1@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLOD2_5end |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | -8bp_to_ENST00000282903, ENST00000360060_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | O00469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.66e-24 | 121 |
muscle precursor cell | 8.94e-21 | 58 |
myoblast | 8.94e-21 | 58 |
multi-potent skeletal muscle stem cell | 8.94e-21 | 58 |
muscle cell | 3.86e-19 | 55 |
embryonic cell | 9.05e-19 | 250 |
vascular associated smooth muscle cell | 5.95e-17 | 32 |
smooth muscle cell | 2.10e-16 | 43 |
smooth muscle myoblast | 2.10e-16 | 43 |
electrically responsive cell | 4.19e-16 | 61 |
electrically active cell | 4.19e-16 | 61 |
fibroblast | 1.34e-13 | 76 |
cardiocyte | 7.68e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.67e-08 | 14 |