FFCP PHASE1:Hg19::chr1:221052733..221052749,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=4978 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q14774 | ||
|association_with_transcript=0bp_to_NM_021958,uc001hmv.3_5end | |association_with_transcript=0bp_to_NM_021958,uc001hmv.3_5end | ||
|cluster_id=chr1:221052733..221052749,+ | |cluster_id=chr1:221052733..221052749,+ | ||
Latest revision as of 06:56, 25 September 2015
| Short description: | p2@HLX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HLX_5end |
| Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
| Association with transcript: | 0bp_to_NM_021958, uc001hmv.3_5end |
| EntrezGene: | HLX |
| HGNC: | 4978 |
| UniProt: | Q14774 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@HLX |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 6.69e-36 | 72 |
| monopoietic cell | 5.83e-34 | 59 |
| monocyte | 5.83e-34 | 59 |
| monoblast | 5.83e-34 | 59 |
| promonocyte | 5.83e-34 | 59 |
| macrophage dendritic cell progenitor | 3.88e-32 | 61 |
| granulocyte monocyte progenitor cell | 5.60e-32 | 67 |
| myeloid lineage restricted progenitor cell | 3.00e-31 | 66 |
| defensive cell | 1.30e-29 | 48 |
| phagocyte | 1.30e-29 | 48 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 1.42e-30 | 108 |
| hematopoietic system | 1.59e-30 | 98 |
| blood island | 1.59e-30 | 98 |
| bone marrow | 1.31e-27 | 76 |
| immune system | 1.50e-27 | 93 |
| bone element | 3.90e-25 | 82 |
| skeletal element | 1.98e-23 | 90 |
| lateral plate mesoderm | 1.91e-22 | 203 |
| skeletal system | 7.76e-20 | 100 |
| mesoderm | 9.90e-16 | 315 |
Showing 1 to 10 of 13 entries
