FFCP PHASE1:Hg19::chr1:221053526..221053540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |HGNC=4978 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_AB463713,DQ893305,DQ896761_5end | |association_with_transcript=326bp_to_AB463713,DQ893305,DQ896761_5end | ||
|cluster_id=chr1:221053526..221053540,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_13_at_HLX_5end | |description=CAGE_peak_13_at_HLX_5end | ||
|id=chr1:221053526..221053540,+ | |id=chr1:221053526..221053540,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.62e-25!42;CL:0000860!6.27e-25!45;CL:0002194!8.24e-25!63;CL:0000576!8.24e-25!63;CL:0000040!8.24e-25!63;CL:0000559!8.24e-25!63;CL:0000766!6.14e-24!76;CL:0002009!1.62e-23!65;CL:0000839!7.20e-22!70;CL:0000557!2.55e-21!71;CL:0000763!2.24e-19!112;CL:0000049!2.24e-19!112;CL:0000048!2.93e-13!430;CL:0000723!1.62e-12!436;CL:0000134!2.23e-12!358;CL:0002320!2.78e-12!365;CL:0000034!1.43e-11!444;CL:0000219!4.15e-11!390;CL:0000738!8.32e-11!140;CL:0002087!9.82e-10!119;CL:0002032!2.41e-09!165;CL:0000837!2.41e-09!165;CL:0000037!2.94e-09!172;CL:0000566!2.94e-09!172;CL:0000988!3.33e-08!182;CL:0002031!3.46e-08!124 | |ontology_enrichment_celltype=CL:0002057!2.62e-25!42;CL:0000860!6.27e-25!45;CL:0002194!8.24e-25!63;CL:0000576!8.24e-25!63;CL:0000040!8.24e-25!63;CL:0000559!8.24e-25!63;CL:0000766!6.14e-24!76;CL:0002009!1.62e-23!65;CL:0000839!7.20e-22!70;CL:0000557!2.55e-21!71;CL:0000763!2.24e-19!112;CL:0000049!2.24e-19!112;CL:0000048!2.93e-13!430;CL:0000723!1.62e-12!436;CL:0000134!2.23e-12!358;CL:0002320!2.78e-12!365;CL:0000034!1.43e-11!444;CL:0000219!4.15e-11!390;CL:0000738!8.32e-11!140;CL:0002087!9.82e-10!119;CL:0002032!2.41e-09!165;CL:0000837!2.41e-09!165;CL:0000037!2.94e-09!172;CL:0000566!2.94e-09!172;CL:0000988!3.33e-08!182;CL:0002031!3.46e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-84;33!CL:0002057;1.57e-84;33!CL:0000473;1.02e-66;39!CL:0000234;1.02e-66;39!CL:0000576;3.00e-37;48!CL:0000766;3.16e-29;69!CL:0000763;1.03e-14;100!CL:0000775;8.49e-13;3!CL:0002087;9.09e-10;104!CL:0000738;3.21e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-72,42;CL:0002057,2.90e-72,42;CL:0000473,9.15e-72,48;CL:0000234,9.15e-72,48;CL:0002194,6.21e-56,59;CL:0000576,6.21e-56,59;CL:0000040,6.21e-56,59;CL:0000559,6.21e-56,59;CL:0000766,7.45e-55,72;CL:0002009,6.86e-54,61;CL:0000839,2.57e-49,66;CL:0000557,1.75e-48,67;CL:0000763,6.69e-44,108;CL:0000049,6.69e-44,108;CL:0000738,3.25e-29,136;CL:0002032,9.54e-27,161;CL:0000837,9.54e-27,161;CL:0002087,2.26e-25,115;CL:0000037,2.76e-25,168;CL:0002031,5.06e-24,120;CL:0000988,1.41e-23,177;CL:0000775,7.70e-13,3;CL:0000134,2.06e-11,354;CL:0002320,5.16e-11,361;CL:0000219,2.06e-10,386;CL:0000048,6.67e-08,427;CL:0000723,1.15e-07,433;CL:0000034,2.31e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-54;42!CL:0000049;2.93e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-19!80;UBERON:0001474!4.95e-18!86;UBERON:0002204!1.01e-16!167;UBERON:0004765!1.54e-16!101;UBERON:0001434!1.54e-16!101;UBERON:0002390!3.00e-15!102;UBERON:0003061!3.00e-15!102;UBERON:0002193!1.08e-14!112;UBERON:0002405!3.36e-13!115;UBERON:0003081!1.58e-11!216;UBERON:0002384!1.81e-11!375;UBERON:0000926!7.94e-07!448;UBERON:0004120!7.94e-07!448;UBERON:0006603!7.94e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!5.21e-19!80;UBERON:0001474!4.95e-18!86;UBERON:0002204!1.01e-16!167;UBERON:0004765!1.54e-16!101;UBERON:0001434!1.54e-16!101;UBERON:0002390!3.00e-15!102;UBERON:0003061!3.00e-15!102;UBERON:0002193!1.08e-14!112;UBERON:0002405!3.36e-13!115;UBERON:0003081!1.58e-11!216;UBERON:0002384!1.81e-11!375;UBERON:0000926!7.94e-07!448;UBERON:0004120!7.94e-07!448;UBERON:0006603!7.94e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.95e-42,76;UBERON:0001474,2.19e-38,82;UBERON:0002405,1.80e-35,93;UBERON:0004765,2.31e-34,90;UBERON:0002390,2.20e-33,98;UBERON:0003061,2.20e-33,98;UBERON:0002193,8.65e-32,108;UBERON:0001434,3.13e-30,100;UBERON:0002204,8.07e-18,167;UBERON:0003081,1.98e-13,203;UBERON:0002384,1.80e-10,371 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0.290796477559129,1.51150377475524,0.242584061187816,1.85943229524548,6.16751832032739,4.33588919253145,7.48000220037591,6.66017836975662,4.25668013799453,2.75796544589295,1.93645405075148,1.35426486594342,1.31769637679823,1.91034305040492,1.57306439111559,3.06083892370903,2.24650318953266,4.47535988059329,3.62836430205388,10.7710375115681,6.39337125799041,3.77272010217159,2.8369261234557,6.22822248995575,10.3011952755265,4.17186334736161,4.56096573880745,5.44859552370032,4.78760926783834,3.48108626184973,0.211255286311942,0,0,0.112328631146495,0.600707571366025,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,0.531831842075461,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0.206651562351531,0,0,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0.412210116953756,0.257640540045629,0,0.168776332241266,0.194874010322397,0.504867548488229,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0.710783897485092,0,0.301439377059586,0,0.299918973546171,0,1.00451418286425,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,1.49801404789436,2.99161459204025,2.07207756718018,0.24538298343828,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0.154209693802656,0,0.328508624055237,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,2.37937552888281,0,0,0,0,0,0,0,0,0,0,1.29848776109822,0,0,0,0,1.86220955581764,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,1.10043013569766,0.828478110694391,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,2.21357815897969,0,0,0,0.235265819698172,0,0,0.149254802886874,1.40227985908335,0,0.378806010550178,0,0,1.37304041038154,0.302461847526478,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0.761610424337591,0.813741466409323,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,1.7537427795545,1.19578356282027,0.817826971279221,0,0,0,0.19998739585493,0.640150378164845,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0.218419276384028,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1026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| ||
|short_description=p13@HLX | |short_description=p13@HLX | ||
}} | }} |
Latest revision as of 07:05, 25 September 2015
Short description: | p13@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 326bp_to_AB463713, DQ893305, DQ896761_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-72 | 42 |
defensive cell | 9.15e-72 | 48 |
phagocyte | 9.15e-72 | 48 |
monopoietic cell | 6.21e-56 | 59 |
monocyte | 6.21e-56 | 59 |
monoblast | 6.21e-56 | 59 |
promonocyte | 6.21e-56 | 59 |
myeloid leukocyte | 7.45e-55 | 72 |
macrophage dendritic cell progenitor | 6.86e-54 | 61 |
myeloid lineage restricted progenitor cell | 2.57e-49 | 66 |
granulocyte monocyte progenitor cell | 1.75e-48 | 67 |
myeloid cell | 6.69e-44 | 108 |
common myeloid progenitor | 6.69e-44 | 108 |
leukocyte | 3.25e-29 | 136 |
hematopoietic oligopotent progenitor cell | 9.54e-27 | 161 |
hematopoietic multipotent progenitor cell | 9.54e-27 | 161 |
nongranular leukocyte | 2.26e-25 | 115 |
hematopoietic stem cell | 2.76e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 5.06e-24 | 120 |
hematopoietic cell | 1.41e-23 | 177 |
neutrophil | 7.70e-13 | 3 |
mesenchymal cell | 2.06e-11 | 354 |
connective tissue cell | 5.16e-11 | 361 |
motile cell | 2.06e-10 | 386 |
multi fate stem cell | 6.67e-08 | 427 |
somatic stem cell | 1.15e-07 | 433 |
stem cell | 2.31e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.95e-42 | 76 |
bone element | 2.19e-38 | 82 |
immune system | 1.80e-35 | 93 |
skeletal element | 2.31e-34 | 90 |
hematopoietic system | 2.20e-33 | 98 |
blood island | 2.20e-33 | 98 |
hemolymphoid system | 8.65e-32 | 108 |
skeletal system | 3.13e-30 | 100 |
musculoskeletal system | 8.07e-18 | 167 |
lateral plate mesoderm | 1.98e-13 | 203 |
connective tissue | 1.80e-10 | 371 |