FFCP PHASE1:Hg19::chr7:116139424..116139439,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:116139424..116139439,+ to FFCP PHASE1:Hg19::chr7:116139424..116139439,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=858 | |EntrezGene=858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |HGNC=1528 | ||
|TSSclassifier=strong | |||
|UniProt=P51636 | |UniProt=P51636 | ||
|association_with_transcript=-4bp_to_ENST00000222693,uc003vid.2,uc003vie.2_5end | |||
|cluster_id=chr7:116139424..116139439,+ | |||
|description=CAGE_peak_8_at_CAV2_5end | |||
|id=chr7:116139424..116139439,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-37!254;CL:0002076!8.27e-23!43;CL:0000223!3.40e-18!59;CL:0002251!1.95e-12!21;CL:0000076!3.59e-10!62;CL:0002159!1.59e-09!13;CL:0002368!3.82e-07!13;CL:0000622!6.65e-07!5;CL:0002321!7.69e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.07e-16;3!CL:0002251;3.89e-15;20!CL:0000240;3.15e-14;6!CL:0000311;3.15e-14;6!CL:0000079;3.15e-14;6!CL:0000237;3.15e-14;6!CL:0002159;3.54e-13;14!CL:0002076;3.35e-12;42!CL:0000312;3.80e-10;5!CL:0002231;1.07e-07;3!CL:0002621;1.07e-07;3!CL:0002077;1.65e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.14e-20,253;CL:0002166,9.44e-17,3;CL:0002251,5.35e-15,20;CL:0002076,6.25e-15,42;CL:0000240,2.86e-14,6;CL:0000311,2.86e-14,6;CL:0000079,2.86e-14,6;CL:0000237,2.86e-14,6;CL:0000036,2.86e-14,6;CL:0000357,2.86e-14,6;CL:0000114,2.86e-14,6;CL:0002159,3.64e-13,14;CL:0000223,5.08e-12,58;CL:0000312,4.25e-10,5;CL:0000076,1.87e-09,63;CL:0002077,7.62e-09,34;CL:0002621,9.72e-08,3;CL:0002231,1.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;3.15e-14;6!CL:0000114;3.15e-14;6!CL:0000223;1.12e-08;58 | |||
|ontology_enrichment_disease=DOID:305!8.30e-15!106;DOID:0050687!1.71e-13!143;DOID:1749!2.04e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.57e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.92e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-15!169;UBERON:0000925!1.11e-15!169;UBERON:0006595!1.11e-15!169;UBERON:0001004!7.43e-11!72;UBERON:0001007!2.06e-10!155;UBERON:0001555!2.06e-10!155;UBERON:0007026!2.06e-10!155;UBERON:0005911!7.71e-10!82;UBERON:0005631!2.26e-09!14;UBERON:0000158!2.26e-09!14;UBERON:0000161!4.33e-09!35;UBERON:0000077!8.42e-09!130;UBERON:0005153!5.67e-08!37;UBERON:0006554!1.32e-07!44;UBERON:0001008!2.64e-07!45;UBERON:0003729!8.42e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.19e-12;4!UBERON:0008895;1.19e-12;4!UBERON:0000486;2.21e-10;12!UBERON:0011159;3.25e-10;5!UBERON:0000365;1.08e-09;5!UBERON:0003729;1.45e-09;13!UBERON:0000344;1.39e-08;20!UBERON:0005631;1.80e-08;10!UBERON:0000158;1.80e-08;10!UBERON:0005910;3.73e-08;6!UBERON:0001949;1.07e-07;3!UBERON:0000305;2.96e-07;7!UBERON:0000997;8.89e-07;1!UBERON:0005056;8.89e-07;1!UBERON:0004176;8.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.08e-12,4;UBERON:0008895,1.08e-12,4;UBERON:0011159,3.02e-10,5;UBERON:0000365,8.35e-10,5;UBERON:0003729,1.55e-09,13;UBERON:0010188,1.31e-08,6;UBERON:0002539,1.31e-08,6;UBERON:0008816,1.31e-08,6;UBERON:0000344,1.32e-08,20;UBERON:0003102,1.54e-08,99;UBERON:0005910,3.03e-08,6;UBERON:0000161,7.30e-08,36;UBERON:0001949,9.72e-08,3;UBERON:0000305,2.42e-07,7;UBERON:0000997,7.77e-07,1;UBERON:0005056,7.77e-07,1 | |||
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| ||
|short_description=p8@CAV2 | |||
}} | }} |
Latest revision as of 07:14, 25 September 2015
Short description: | p8@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000222693, uc003vid.2, uc003vie.2_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.14e-20 | 253 |
epithelial cell of Malassez | 9.44e-17 | 3 |
epithelial cell of alimentary canal | 5.35e-15 | 20 |
endo-epithelial cell | 6.25e-15 | 42 |
stratified squamous epithelial cell | 2.86e-14 | 6 |
keratin accumulating cell | 2.86e-14 | 6 |
stratified epithelial cell | 2.86e-14 | 6 |
keratinizing barrier epithelial cell | 2.86e-14 | 6 |
epithelial fate stem cell | 2.86e-14 | 6 |
stratified epithelial stem cell | 2.86e-14 | 6 |
surface ectodermal cell | 2.86e-14 | 6 |
general ecto-epithelial cell | 3.64e-13 | 14 |
endodermal cell | 5.08e-12 | 58 |
keratinocyte | 4.25e-10 | 5 |
squamous epithelial cell | 1.87e-09 | 63 |
ecto-epithelial cell | 7.62e-09 | 34 |
gingival epithelial cell | 9.72e-08 | 3 |
epithelial cell of prostate | 1.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.08e-12 | 4 |
splanchnocranium | 1.08e-12 | 4 |
primary subdivision of cranial skeletal system | 3.02e-10 | 5 |
urothelium | 8.35e-10 | 5 |
mouth mucosa | 1.55e-09 | 13 |
protuberance | 1.31e-08 | 6 |
pharyngeal arch | 1.31e-08 | 6 |
embryonic head | 1.31e-08 | 6 |
mucosa | 1.32e-08 | 20 |
surface structure | 1.54e-08 | 99 |
transitional epithelium | 3.03e-08 | 6 |
orifice | 7.30e-08 | 36 |
gingival epithelium | 9.72e-08 | 3 |
amnion | 2.42e-07 | 7 |
mammalian vulva | 7.77e-07 | 1 |
external female genitalia | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.92e-09 | 14 |