FFCP PHASE1:Mm9::chr8:4493443..4493472,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67260 | |EntrezGene=67260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |MCL_coexpression_id=28 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D6J1 | |UniProt=Q9D6J1 | ||
|association_with_transcript=38bp_to_ENSMUST00000008350,NM_026058,uc009ktx.2_5end | |association_with_transcript=38bp_to_ENSMUST00000008350,NM_026058,uc009ktx.2_5end | ||
|cluster_id=chr8:4493443..4493472,+ | |||
|description=CAGE_peak_1_at_Lass4_5end | |description=CAGE_peak_1_at_Lass4_5end | ||
|id=chr8:4493443..4493472,+ | |id=chr8:4493443..4493472,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.86e-09!23;UBERON:0001009!2.86e-09!23;UBERON:0000073!3.81e-09!75;UBERON:0001016!3.81e-09!75;UBERON:0004121!4.10e-09!102;UBERON:0000924!4.10e-09!102;UBERON:0006601!4.10e-09!102;UBERON:0001017!1.33e-08!73;UBERON:0005743!1.33e-08!73;UBERON:0000025!6.93e-08!114;UBERON:0000955!1.33e-07!50;UBERON:0006238!1.33e-07!50;UBERON:0007100!1.59e-07!18;UBERON:0000948!1.59e-07!18;UBERON:0005498!1.59e-07!18;UBERON:0004140!1.59e-07!18;UBERON:0009881!1.59e-07!18;UBERON:0004141!1.59e-07!18;UBERON:0003084!1.59e-07!18;UBERON:0007005!1.59e-07!18;UBERON:0004139!1.59e-07!18;UBERON:0004291!1.59e-07!18;UBERON:0002616!1.59e-07!49;UBERON:0000033!3.10e-07!63;UBERON:0004111!4.65e-07!122 | |ontology_enrichment_uberon=UBERON:0004535!2.86e-09!23;UBERON:0001009!2.86e-09!23;UBERON:0000073!3.81e-09!75;UBERON:0001016!3.81e-09!75;UBERON:0004121!4.10e-09!102;UBERON:0000924!4.10e-09!102;UBERON:0006601!4.10e-09!102;UBERON:0001017!1.33e-08!73;UBERON:0005743!1.33e-08!73;UBERON:0000025!6.93e-08!114;UBERON:0000955!1.33e-07!50;UBERON:0006238!1.33e-07!50;UBERON:0007100!1.59e-07!18;UBERON:0000948!1.59e-07!18;UBERON:0005498!1.59e-07!18;UBERON:0004140!1.59e-07!18;UBERON:0009881!1.59e-07!18;UBERON:0004141!1.59e-07!18;UBERON:0003084!1.59e-07!18;UBERON:0007005!1.59e-07!18;UBERON:0004139!1.59e-07!18;UBERON:0004291!1.59e-07!18;UBERON:0002616!1.59e-07!49;UBERON:0000033!3.10e-07!63;UBERON:0004111!4.65e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.89e-11,92;UBERON:0004121,9.83e-10,95;UBERON:0000924,9.83e-10,95;UBERON:0006601,9.83e-10,95;UBERON:0004535,2.85e-09,23;UBERON:0001009,2.85e-09,23;UBERON:0001016,3.80e-09,75;UBERON:0001017,1.32e-08,73;UBERON:0000025,7.58e-08,114;UBERON:0007100,1.59e-07,18;UBERON:0000948,1.59e-07,18;UBERON:0005498,1.59e-07,18;UBERON:0004140,1.59e-07,18;UBERON:0009881,1.59e-07,18;UBERON:0004141,1.59e-07,18;UBERON:0003084,1.59e-07,18;UBERON:0007005,1.59e-07,18;UBERON:0004139,1.59e-07,18;UBERON:0004291,1.59e-07,18;UBERON:0010371,2.50e-07,73;UBERON:0000955,4.15e-07,47;UBERON:0006238,4.15e-07,47;UBERON:0002616,4.96e-07,46;UBERON:0004111,5.05e-07,122;UBERON:0000073,7.71e-07,54 | |||
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| ||
|short_description=p1@Lass4 | |short_description=p1@Lass4 | ||
}} | }} |
Latest revision as of 13:42, 25 September 2015
Short description: | p1@Lass4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lass4_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 38bp_to_ENSMUST00000008350, NM_026058, uc009ktx.2_5end |
EntrezGene: | Lass4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.89e-11 | 92 |
ectoderm-derived structure | 9.83e-10 | 95 |
ectoderm | 9.83e-10 | 95 |
presumptive ectoderm | 9.83e-10 | 95 |
cardiovascular system | 2.85e-09 | 23 |
circulatory system | 2.85e-09 | 23 |
nervous system | 3.80e-09 | 75 |
central nervous system | 1.32e-08 | 73 |
tube | 7.58e-08 | 114 |
primary circulatory organ | 1.59e-07 | 18 |
heart | 1.59e-07 | 18 |
primitive heart tube | 1.59e-07 | 18 |
primary heart field | 1.59e-07 | 18 |
anterior lateral plate mesoderm | 1.59e-07 | 18 |
heart tube | 1.59e-07 | 18 |
heart primordium | 1.59e-07 | 18 |
cardiac mesoderm | 1.59e-07 | 18 |
cardiogenic plate | 1.59e-07 | 18 |
heart rudiment | 1.59e-07 | 18 |
ecto-epithelium | 2.50e-07 | 73 |
brain | 4.15e-07 | 47 |
future brain | 4.15e-07 | 47 |
regional part of brain | 4.96e-07 | 46 |
anatomical conduit | 5.05e-07 | 122 |
regional part of nervous system | 7.71e-07 | 54 |