FFCP PHASE1:Mm9::chr8:4493443..4493472,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:4493443..4493472,+ to FFCP PHASE1:Mm9::chr8:4493443..4493472,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67260 | |EntrezGene=67260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D6J1 | |UniProt=Q9D6J1 | ||
|association_with_transcript=38bp_to_ENSMUST00000008350,NM_026058,uc009ktx.2_5end | |||
|cluster_id=chr8:4493443..4493472,+ | |||
|description=CAGE_peak_1_at_Lass4_5end | |||
|id=chr8:4493443..4493472,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.86e-09!23;UBERON:0001009!2.86e-09!23;UBERON:0000073!3.81e-09!75;UBERON:0001016!3.81e-09!75;UBERON:0004121!4.10e-09!102;UBERON:0000924!4.10e-09!102;UBERON:0006601!4.10e-09!102;UBERON:0001017!1.33e-08!73;UBERON:0005743!1.33e-08!73;UBERON:0000025!6.93e-08!114;UBERON:0000955!1.33e-07!50;UBERON:0006238!1.33e-07!50;UBERON:0007100!1.59e-07!18;UBERON:0000948!1.59e-07!18;UBERON:0005498!1.59e-07!18;UBERON:0004140!1.59e-07!18;UBERON:0009881!1.59e-07!18;UBERON:0004141!1.59e-07!18;UBERON:0003084!1.59e-07!18;UBERON:0007005!1.59e-07!18;UBERON:0004139!1.59e-07!18;UBERON:0004291!1.59e-07!18;UBERON:0002616!1.59e-07!49;UBERON:0000033!3.10e-07!63;UBERON:0004111!4.65e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.89e-11,92;UBERON:0004121,9.83e-10,95;UBERON:0000924,9.83e-10,95;UBERON:0006601,9.83e-10,95;UBERON:0004535,2.85e-09,23;UBERON:0001009,2.85e-09,23;UBERON:0001016,3.80e-09,75;UBERON:0001017,1.32e-08,73;UBERON:0000025,7.58e-08,114;UBERON:0007100,1.59e-07,18;UBERON:0000948,1.59e-07,18;UBERON:0005498,1.59e-07,18;UBERON:0004140,1.59e-07,18;UBERON:0009881,1.59e-07,18;UBERON:0004141,1.59e-07,18;UBERON:0003084,1.59e-07,18;UBERON:0007005,1.59e-07,18;UBERON:0004139,1.59e-07,18;UBERON:0004291,1.59e-07,18;UBERON:0010371,2.50e-07,73;UBERON:0000955,4.15e-07,47;UBERON:0006238,4.15e-07,47;UBERON:0002616,4.96e-07,46;UBERON:0004111,5.05e-07,122;UBERON:0000073,7.71e-07,54 | |||
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|phase1_expression=3.84357233051505,4.18770489167233,8.64498554840118,2.41971369045464,2.50447864973174,8.72972213941827,11.4470193891808,17.1734020177296,3.801295498095,5.61754863172784,2.22583358693156,3.74929147278081,12.8400547448404,14.1621051918776,1.99865857089398,3.03712901084739,2.09868563438444,14.8267217718372,13.3001000597567,14.004858509335,7.82398269389842,0.0992909512008853,0,16.4792195477209,13.7645568640302,7.46501553349526,7.32295393470427,12.2818602630957,7.41091335879858,5.29263272495855,7.76056787293567,0,0,0,19.3530585233354,17.4546377626417,16.3335485009895,0,0,0,0,0,0,19.6399036041901,18.8561092068297,10.6457116253775,10.9534788208725,45.5672576835133,33.8316721411087,39.080409713931,18.3382212329225,28.7505128729943,11.5769998179838,5.07753499407941,5.04140698713696,16.4646039063006,9.16907007804022,22.6895720602075,2.63011399117477,2.11596391708813,2.53532561402472,12.876092218627,16.8966011261116,6.74924787961049,10.8775299882367,8.5257613793532,13.1824048628098,23.8215349299364,6.42875596312561,5.26523159493594,5.46844899513593,6.85562362569129,5.07997644188711,3.30725157880376,4.69642807989358,6.43453150627015,11.0115880999389,8.81042632787795,10.4452442614246,5.80299666012853,6.22115976496386,5.73004707612436,8.93385596804419,10.1297269805702,13.4462458043593,7.95497180778903,5.41012387036591,4.84638559145781,8.63278603998298,19.8753203080846,22.6094301187309,10.3250865237766,0,0,1.29955283489534,0.448026887097336,12.9208866521212,10.2258193546835,10.6512261887176,9.89350808628953,12.9575946194546,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,3.76806803072898,18.125651855302,9.05497048295431,4.51061849591953,6.39377504455497,5.07354093963329,5.87818298155228,7.4080885495494,4.90099706185734,2.47194967734374,7.66376591675532,3.5384422077995,4.85300549842228,5.07935492458905,1.93950101254089,5.59175283654366,12.296793474485,10.8912287542997,7.15279754584056,5.27186547826049,2.39961092397363,4.19331749341113,13.481157546434,7.77751024791665,7.53926112677186,14.9488915365358,13.8086346958378,11.2205544062162,12.8170597823529,12.6280811174392,5.72272064806428,8.84529654517861,1007.17472227266,4.42409506073193,3.90833577536904,4.32149111532838,6.17889753126432,6.80364991513279,9.48041530107888,7.12133106653939,265.688361748969,3.23351989399263,3.02569728268511,3.34307135911503,4.3839146485515,3.61461423993277,8.70630416305416,6.79081050146213,8.16040493955822,1.40442637462647,2.57347907114715,2.84163499395593,9.32065976409758,11.9608290590359,10.0834754418168,15.6251525486239,15.7411385397923,12.4956361438776,12.0917651270212,9.92611585178591,12.8441876603886,14.8103864922132,17.0734162642259,13.1331471464286,17.9825984533159,13.173006917463,16.7758023450465,14.5100064509248,10.9078889122042,2.31293148088659,7.93351699990633,5.11891801284562,5.57368012465052,3.73715637834071,6.25218926332362,5.11469500843202,3.61428689613862,6.16887780007865,2.63518327558417,6.53471542880701,7.56034593756373,8.18849165900304,2.69645822596266,11.4553166433588,16.3295844068581,4.55202962287396,4.34144347916969,9.01661885384643,4.88763186828754,3.10323979468201,4.97964321221262,6.00747102680444,3.83786384746966,3.767969468193,5.30607804863742,3.26097889795864,1.66845105716094,1.37591296579242,0.899448449539415,0.811440485554012,2.17059443777175,2.03700681425136,1.72617682470486,2.43202840162553,1.37280706594041,2.87536413054709,3.34926852901653,2.80833905803104,1.76805214562978,1.79397413521912,1.4473305640901,17.736306255994,4.9267767060326,6.35563408123901,8.31750920298422,7.04070744865506,12.2279567932526,11.6641384034147,12.6836871107569,12.4531763843891,15.2810635857655,13.7131101045439,19.6635977658886,16.0597033135283,15.7667473853848,9.04747703635634,1.63171705145613,2.45882136509518,3.03530420935206,10.5963389391943,10.6662634798905,6.72133276044369,5.30188947129183,8.51872192423893,7.41833614163613,8.61693590931196,14.8160654730582,12.4767257486141,5.09537755419898,13.7635638569464,16.3663280430335,13.8350722281283,8.67567554338879,8.37446502728785,14.0671826897132,14.0082785044075,10.7230579932148,7.96470830039777,5.09839335925461,5.13950046840077,6.22396763194464,7.38254732201932,9.22305443831782,5.16856586336442,7.27067458955011,9.9819265947722,7.58488219045958,10.5418608574999,5.15677716240934,28.2564872775644,6.66226047915848,10.0899773350549,7.28745919107414,8.33499098118686,5.70780216326626,9.21474515371877,7.91608867697958,2.3467170806371,1.90648863777438,3.08739757276947,22.2596441470998,7.58882805470756,11.218204036637,25.7844263046775,23.9645713627789,10.7847909553045,8.34413859047294,3.41741761595705,5.77883230297023,6.48180845793991,3.20226376907975,4.37421528707281,3.43167259809784,6.96911562974807,6.85762116385924,7.32459861163446,9.54670618015114,5.06137589729817,11.5892096262304,10.2605073780711,9.40897332065109,7.86105229486239,10.9240120571705,10.9102561557443,9.6849698534091,19.8310909136443,4.34937519160848,0,5.38259565758324,7.1147150896552,11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| ||
|short_description=p1@Lass4 | |||
}} | }} |
Latest revision as of 13:42, 25 September 2015
Short description: | p1@Lass4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lass4_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 38bp_to_ENSMUST00000008350, NM_026058, uc009ktx.2_5end |
EntrezGene: | Lass4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.89e-11 | 92 |
ectoderm-derived structure | 9.83e-10 | 95 |
ectoderm | 9.83e-10 | 95 |
presumptive ectoderm | 9.83e-10 | 95 |
cardiovascular system | 2.85e-09 | 23 |
circulatory system | 2.85e-09 | 23 |
nervous system | 3.80e-09 | 75 |
central nervous system | 1.32e-08 | 73 |
tube | 7.58e-08 | 114 |
primary circulatory organ | 1.59e-07 | 18 |
heart | 1.59e-07 | 18 |
primitive heart tube | 1.59e-07 | 18 |
primary heart field | 1.59e-07 | 18 |
anterior lateral plate mesoderm | 1.59e-07 | 18 |
heart tube | 1.59e-07 | 18 |
heart primordium | 1.59e-07 | 18 |
cardiac mesoderm | 1.59e-07 | 18 |
cardiogenic plate | 1.59e-07 | 18 |
heart rudiment | 1.59e-07 | 18 |
ecto-epithelium | 2.50e-07 | 73 |
brain | 4.15e-07 | 47 |
future brain | 4.15e-07 | 47 |
regional part of brain | 4.96e-07 | 46 |
anatomical conduit | 5.05e-07 | 122 |
regional part of nervous system | 7.71e-07 | 54 |