FFCP PHASE1:Mm9::chr5:138612444..138612474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17220 | |EntrezGene=17220 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000147920_5end | |association_with_transcript=0bp_to_ENSMUST00000147920_5end | ||
|cluster_id=chr5:138612444..138612474,- | |||
|description=CAGE_peak_5_at_Mcm7_5end | |description=CAGE_peak_5_at_Mcm7_5end | ||
|id=chr5:138612444..138612474,- | |id=chr5:138612444..138612474,- | ||
|ontology_enrichment_celltype=CL:0000838!6.16e-07!12 | |ontology_enrichment_celltype=CL:0000838!6.16e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.48e-07,12;CL:0000791,3.53e-07,9;CL:0000789,3.53e-07,9;CL:0002420,3.53e-07,9;CL:0002419,3.53e-07,9;CL:0000790,3.53e-07,9;CL:0000542,3.77e-07,13;CL:0000051,3.77e-07,13;CL:0000084,6.77e-07,11;CL:0000827,6.77e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.99e-13!94;UBERON:0007811!1.59e-12!86;UBERON:0003408!4.88e-08!24;UBERON:0006562!5.14e-08!24;UBERON:0001557!5.14e-08!24;UBERON:0001042!5.14e-08!24;UBERON:0008814!5.14e-08!24;UBERON:0009145!5.14e-08!24;UBERON:0002370!9.21e-08!23;UBERON:0000974!9.21e-08!23;UBERON:0004807!9.21e-08!23;UBERON:0005058!9.21e-08!23;UBERON:0003351!9.21e-08!23;UBERON:0009113!9.21e-08!23;UBERON:0003295!9.21e-08!23;UBERON:0009722!9.21e-08!23;UBERON:0005562!9.21e-08!23;UBERON:0007690!9.21e-08!23;UBERON:0001004!1.07e-07!42;UBERON:0000065!2.00e-07!41 | |ontology_enrichment_uberon=UBERON:0000153!1.99e-13!94;UBERON:0007811!1.59e-12!86;UBERON:0003408!4.88e-08!24;UBERON:0006562!5.14e-08!24;UBERON:0001557!5.14e-08!24;UBERON:0001042!5.14e-08!24;UBERON:0008814!5.14e-08!24;UBERON:0009145!5.14e-08!24;UBERON:0002370!9.21e-08!23;UBERON:0000974!9.21e-08!23;UBERON:0004807!9.21e-08!23;UBERON:0005058!9.21e-08!23;UBERON:0003351!9.21e-08!23;UBERON:0009113!9.21e-08!23;UBERON:0003295!9.21e-08!23;UBERON:0009722!9.21e-08!23;UBERON:0005562!9.21e-08!23;UBERON:0007690!9.21e-08!23;UBERON:0001004!1.07e-07!42;UBERON:0000065!2.00e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.07e-09,24;UBERON:0006562,2.20e-09,24;UBERON:0001557,2.20e-09,24;UBERON:0001042,2.20e-09,24;UBERON:0008814,2.20e-09,24;UBERON:0009145,2.20e-09,24;UBERON:0000153,3.91e-09,43;UBERON:0002370,4.20e-09,23;UBERON:0000974,4.20e-09,23;UBERON:0004807,4.20e-09,23;UBERON:0005058,4.20e-09,23;UBERON:0003351,4.20e-09,23;UBERON:0009113,4.20e-09,23;UBERON:0003295,4.20e-09,23;UBERON:0009722,4.20e-09,23;UBERON:0005562,4.20e-09,23;UBERON:0007690,4.20e-09,23;UBERON:0001004,4.93e-09,42;UBERON:0007811,5.20e-09,36;UBERON:0000065,9.97e-09,41;UBERON:0000072,3.20e-07,27;UBERON:0004177,3.96e-07,29;UBERON:0005057,3.96e-07,29;UBERON:0000077,6.67e-07,35 | |||
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| ||
|short_description=p5@Mcm7 | |short_description=p5@Mcm7 | ||
}} | }} |
Latest revision as of 15:16, 25 September 2015
Short description: | p5@Mcm7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mcm7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000147920_5end |
EntrezGene: | Mcm7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.48e-07 | 12 |
mature alpha-beta T cell | 3.53e-07 | 9 |
alpha-beta T cell | 3.53e-07 | 9 |
immature T cell | 3.53e-07 | 9 |
mature T cell | 3.53e-07 | 9 |
immature alpha-beta T cell | 3.53e-07 | 9 |
lymphocyte | 3.77e-07 | 13 |
common lymphoid progenitor | 3.77e-07 | 13 |
T cell | 6.77e-07 | 11 |
pro-T cell | 6.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 2.07e-09 | 24 |
pharynx | 2.20e-09 | 24 |
upper respiratory tract | 2.20e-09 | 24 |
chordate pharynx | 2.20e-09 | 24 |
pharyngeal arch system | 2.20e-09 | 24 |
pharyngeal region of foregut | 2.20e-09 | 24 |
anterior region of body | 3.91e-09 | 43 |
thymus | 4.20e-09 | 23 |
neck | 4.20e-09 | 23 |
respiratory system epithelium | 4.20e-09 | 23 |
hemolymphoid system gland | 4.20e-09 | 23 |
pharyngeal epithelium | 4.20e-09 | 23 |
thymic region | 4.20e-09 | 23 |
pharyngeal gland | 4.20e-09 | 23 |
entire pharyngeal arch endoderm | 4.20e-09 | 23 |
thymus primordium | 4.20e-09 | 23 |
early pharyngeal endoderm | 4.20e-09 | 23 |
respiratory system | 4.93e-09 | 42 |
craniocervical region | 5.20e-09 | 36 |
respiratory tract | 9.97e-09 | 41 |
segment of respiratory tract | 3.20e-07 | 27 |
hemopoietic organ | 3.96e-07 | 29 |
immune organ | 3.96e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 6.67e-07 | 35 |