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FFCP PHASE1:Mm9::chr5:139729443..139729473,+: Difference between revisions

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{{FFCP|EntrezGene=67604|HGNC=|MCL_coexpression_id=55|UniProt=Q9D1H7,D3Z7S0|association_with_transcript=0bp_to_ENSMUST00000110878,ENSMUST00000138508,NM_001163316,uc009agh.2_5end|description=CAGE_peak_3_at_Get4_5end|id=chr5:139729443..139729473,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.06e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!2.30e-11!47;UBERON:0002107!1.53e-08!22;UBERON:0007499!1.53e-08!22;UBERON:0006925!1.53e-08!22;UBERON:0009497!1.53e-08!22;UBERON:0000015!1.53e-08!22;UBERON:0002423!1.53e-08!22;UBERON:0006235!1.53e-08!22;UBERON:0008835!1.53e-08!22;UBERON:0003894!1.53e-08!22;UBERON:0004161!1.53e-08!22;UBERON:0008836!1.53e-08!22;UBERON:0005172!5.94e-08!49;UBERON:0005173!5.94e-08!49;UBERON:0002417!5.94e-08!49;UBERON:0000916!5.94e-08!49;UBERON:0005156!8.08e-08!26;UBERON:0000990!8.08e-08!26;UBERON:0000466!8.63e-08!79;UBERON:0009854!1.11e-07!23;UBERON:0009856!1.11e-07!23;UBERON:0002365!2.48e-07!25;UBERON:0002330!2.48e-07!25;UBERON:0003064!3.52e-07!14;UBERON:0003133!7.41e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.73e-18,45;UBERON:0002107,1.57e-14,22;UBERON:0007499,1.57e-14,22;UBERON:0006925,1.57e-14,22;UBERON:0009497,1.57e-14,22;UBERON:0000015,1.57e-14,22;UBERON:0002423,1.57e-14,22;UBERON:0006235,1.57e-14,22;UBERON:0008835,1.57e-14,22;UBERON:0003894,1.57e-14,22;UBERON:0004161,1.57e-14,22;UBERON:0008836,1.57e-14,22;UBERON:0002365,6.57e-14,25;UBERON:0002330,6.57e-14,25;UBERON:0009854,1.04e-13,23;UBERON:0009856,1.04e-13,23;UBERON:0005172,2.61e-13,49;UBERON:0005173,2.61e-13,49;UBERON:0002417,2.61e-13,49;UBERON:0000916,2.61e-13,49;UBERON:0003104,1.08e-12,61;UBERON:0009142,1.08e-12,61;UBERON:0002530,1.24e-11,65;UBERON:0009569,6.48e-11,66;UBERON:0002368,1.18e-09,60;UBERON:0005177,1.48e-09,79;UBERON:0002369,1.99e-09,7;UBERON:0006858,1.99e-09,7;UBERON:0003064,2.97e-09,14;UBERON:0002100,4.21e-09,90;UBERON:0003101,4.46e-08,16;UBERON:0000079,4.46e-08,16;UBERON:0000949,1.07e-07,72;UBERON:0000473,1.85e-07,14;UBERON:0004176,2.90e-07,17;UBERON:0009196,2.90e-07,17;UBERON:0009117,2.90e-07,17;UBERON:0003135,7.73e-07,15;UBERON:0000991,9.67e-07,18;UBERON:0005564,9.67e-07,18|phase1_expression=0,0.697950815278722,0,0,1.00179145989269,0.503637815735669,0.467225281191051,0.516493293766305,0.563154888606667,0.70219357896598,0.68487187290202,0.159544317990673,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.157731082679119,0,0,0.595303031057488,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0,3.17515336729816,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,1.1330713617802,0.506884656097573,0.734187008646726,0.782391344348039,0.65407546914134,2.85592037554813,1.94429899074283,1.53985063787899,0,0,0,0.336093799142464,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0,0,0.558365998002762,0,1.06958773443767,0,0.142371680799103,0.186399445825301,0,0,1.15945795480671,2.58127163094416,1.3599426674155,1.07940638327563,1.94932925234301,3.13618820968135,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,1.82694207550496,0,12.9144660986398,0.520455980298408,4.56698217468212,2.99800146432876,8.74191315205211,5.17390311397101,10.4303270803631,12.6069433544531,0.433798070759735,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.766371165625774,0,0,0.254140454146129,0.599162557619291,0.457500602818626,0.376963056338593,0,0.511430914660661,1.24672826735736,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,1.47309299120532,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,0,0,0.834141747676794,0,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0,0.590292695242212,0,0.232533944750408,0.268273401399619,1.05088808130453,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0,0,0.432276099749388,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.784993639206874,1.48076596706161,2.66807364378434,0.333690211432188,0.196558995113203,0,0.202860121388503,1.20588579876208,0.763877555344259,1.43848068725405,1.45921704097532,0.823684239564244,2.87536413054709,4.09355042435354,1.5601883655728,2.52578877947112,1.25578189465339,4.82443521363367,0.369506380333209,0,0,0.169745085775188,0,1.34005005953453,0.714130922658041,1.36593553500459,0.157635144106191,0.44292937929755,0.478364305972461,0.81931657357869,0.172684981865896,1.15719246865209,0,0,0,0,0.321101179975584,0.703270119553219,0.163934945376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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67604
|HGNC=
|MCL_coexpression_id=55
|TSSclassifier=NA
|UniProt=Q9D1H7,D3Z7S0
|association_with_transcript=0bp_to_ENSMUST00000110878,ENSMUST00000138508,NM_001163316,uc009agh.2_5end
|cluster_id=chr5:139729443..139729473,+
|description=CAGE_peak_3_at_Get4_5end
|id=chr5:139729443..139729473,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,3.06e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005256!2.30e-11!47;UBERON:0002107!1.53e-08!22;UBERON:0007499!1.53e-08!22;UBERON:0006925!1.53e-08!22;UBERON:0009497!1.53e-08!22;UBERON:0000015!1.53e-08!22;UBERON:0002423!1.53e-08!22;UBERON:0006235!1.53e-08!22;UBERON:0008835!1.53e-08!22;UBERON:0003894!1.53e-08!22;UBERON:0004161!1.53e-08!22;UBERON:0008836!1.53e-08!22;UBERON:0005172!5.94e-08!49;UBERON:0005173!5.94e-08!49;UBERON:0002417!5.94e-08!49;UBERON:0000916!5.94e-08!49;UBERON:0005156!8.08e-08!26;UBERON:0000990!8.08e-08!26;UBERON:0000466!8.63e-08!79;UBERON:0009854!1.11e-07!23;UBERON:0009856!1.11e-07!23;UBERON:0002365!2.48e-07!25;UBERON:0002330!2.48e-07!25;UBERON:0003064!3.52e-07!14;UBERON:0003133!7.41e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.73e-18,45;UBERON:0002107,1.57e-14,22;UBERON:0007499,1.57e-14,22;UBERON:0006925,1.57e-14,22;UBERON:0009497,1.57e-14,22;UBERON:0000015,1.57e-14,22;UBERON:0002423,1.57e-14,22;UBERON:0006235,1.57e-14,22;UBERON:0008835,1.57e-14,22;UBERON:0003894,1.57e-14,22;UBERON:0004161,1.57e-14,22;UBERON:0008836,1.57e-14,22;UBERON:0002365,6.57e-14,25;UBERON:0002330,6.57e-14,25;UBERON:0009854,1.04e-13,23;UBERON:0009856,1.04e-13,23;UBERON:0005172,2.61e-13,49;UBERON:0005173,2.61e-13,49;UBERON:0002417,2.61e-13,49;UBERON:0000916,2.61e-13,49;UBERON:0003104,1.08e-12,61;UBERON:0009142,1.08e-12,61;UBERON:0002530,1.24e-11,65;UBERON:0009569,6.48e-11,66;UBERON:0002368,1.18e-09,60;UBERON:0005177,1.48e-09,79;UBERON:0002369,1.99e-09,7;UBERON:0006858,1.99e-09,7;UBERON:0003064,2.97e-09,14;UBERON:0002100,4.21e-09,90;UBERON:0003101,4.46e-08,16;UBERON:0000079,4.46e-08,16;UBERON:0000949,1.07e-07,72;UBERON:0000473,1.85e-07,14;UBERON:0004176,2.90e-07,17;UBERON:0009196,2.90e-07,17;UBERON:0009117,2.90e-07,17;UBERON:0003135,7.73e-07,15;UBERON:0000991,9.67e-07,18;UBERON:0005564,9.67e-07,18
|phase1_expression=0,0.697950815278722,0,0,1.00179145989269,0.503637815735669,0.467225281191051,0.516493293766305,0.563154888606667,0.70219357896598,0.68487187290202,0.159544317990673,0,0,0.333109761815663,0.202475267389826,1.39912375625629,0.157731082679119,0,0,0.595303031057488,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0,3.17515336729816,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,1.1330713617802,0.506884656097573,0.734187008646726,0.782391344348039,0.65407546914134,2.85592037554813,1.94429899074283,1.53985063787899,0,0,0,0.336093799142464,0,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0,0,0.558365998002762,0,1.06958773443767,0,0.142371680799103,0.186399445825301,0,0,1.15945795480671,2.58127163094416,1.3599426674155,1.07940638327563,1.94932925234301,3.13618820968135,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,1.82694207550496,0,12.9144660986398,0.520455980298408,4.56698217468212,2.99800146432876,8.74191315205211,5.17390311397101,10.4303270803631,12.6069433544531,0.433798070759735,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.766371165625774,0,0,0.254140454146129,0.599162557619291,0.457500602818626,0.376963056338593,0,0.511430914660661,1.24672826735736,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,1.47309299120532,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,0,0,0.834141747676794,0,0.61734640922383,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0,0.590292695242212,0,0.232533944750408,0.268273401399619,1.05088808130453,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,1.05144974282064,0,0,0,0.213288250535234,0,0,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0,0,0.432276099749388,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.784993639206874,1.48076596706161,2.66807364378434,0.333690211432188,0.196558995113203,0,0.202860121388503,1.20588579876208,0.763877555344259,1.43848068725405,1.45921704097532,0.823684239564244,2.87536413054709,4.09355042435354,1.5601883655728,2.52578877947112,1.25578189465339,4.82443521363367,0.369506380333209,0,0,0.169745085775188,0,1.34005005953453,0.714130922658041,1.36593553500459,0.157635144106191,0.44292937929755,0.478364305972461,0.81931657357869,0.172684981865896,1.15719246865209,0,0,0,0,0.321101179975584,0.703270119553219,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0,1.70328102249922,0.890328018336276,0.325773918707152,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,0,0,0,3.40439605753788,0,0.388076051348264,0,0.354680467284547,0.178368817602071,0.658196082408484,1.8267896946876,0.23467170806371,0.63549621259146,12.5701186891328,0,0.484393280087717,0.180938774784468,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0.436725127492355,0.404593039154462,0.661227645802687,0.785267825952089,0.259229946583586,1.24267862617385,2.81846469342095,0.299033092087958,0.330916980914195,1.36115831840833,0.904118764344118,1.01373675294467,1.40828686374905,1.17183946359555,3.8797957437513,2.41584120826006,1.72818003754719,0,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0.15241361331,0,0,0,0.350630706544707,0.453460767230423,0,0,0,1.54551675225752,0.93841237725591,0.183151624267265,0.857473516316263,5.517293144389,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0,0,0,0,0,0.209613162627982,0,0.666740183404846,0.824140228955577,1.28367683836726,0.252697211763798,0,0,0.561849044819294,0.320125762024346,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.726732083161643,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.701794825336225,0,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p3@Get4
}}

Latest revision as of 15:46, 25 September 2015

Short description:p3@Get4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Get4_5end
Coexpression cluster:MCL_coexpression_mm9:55
Association with transcript: 0bp_to_ENSMUST00000110878, ENSMUST00000138508, NM_001163316, uc009agh.2_5end
EntrezGene:Get4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Get4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D712.91
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I310.43
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte3.06e-075

Uber anatomy
Ontology termp-valuen
trunk mesenchyme2.73e-1845
liver1.57e-1422
epithelial sac1.57e-1422
digestive gland1.57e-1422
epithelium of foregut-midgut junction1.57e-1422
anatomical boundary1.57e-1422
hepatobiliary system1.57e-1422
foregut-midgut junction1.57e-1422
hepatic diverticulum1.57e-1422
liver primordium1.57e-1422
septum transversum1.57e-1422
liver bud1.57e-1422
exocrine gland6.57e-1425
exocrine system6.57e-1425
digestive tract diverticulum1.04e-1323
sac1.04e-1323
abdomen element2.61e-1349
abdominal segment element2.61e-1349
abdominal segment of trunk2.61e-1349
abdomen2.61e-1349
mesenchyme1.08e-1261
entire embryonic mesenchyme1.08e-1261
gland1.24e-1165
subdivision of trunk6.48e-1166
endocrine gland1.18e-0960
trunk region element1.48e-0979
adrenal gland1.99e-097
adrenal/interrenal gland1.99e-097
intermediate mesoderm2.97e-0914
trunk4.21e-0990
male organism4.46e-0816
male reproductive system4.46e-0816
endocrine system1.07e-0772
testis1.85e-0714
external genitalia2.90e-0717
indifferent external genitalia2.90e-0717
indifferent gonad2.90e-0717
male reproductive organ7.73e-0715
gonad9.67e-0718
gonad primordium9.67e-0718
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