FFCP PHASE1:Mm9::chr3:68930958..68930982,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:68930958..68930982,- to FFCP PHASE1:Mm9::chr3:68930958..68930982,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16649 | |EntrezGene=16649 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35343,Q4FJX1 | |UniProt=O35343,Q4FJX1 | ||
|association_with_transcript=31bp_to_NM_008467,uc008pme.1_5end | |||
|cluster_id=chr3:68930958..68930982,- | |||
|description=CAGE_peak_2_at_Kpna4_5end | |||
|id=chr3:68930958..68930982,- | |||
|ontology_enrichment_celltype=CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.73e-07,9;CL:0000789,4.73e-07,9;CL:0002420,4.73e-07,9;CL:0002419,4.73e-07,9;CL:0000790,4.73e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!4.36e-08!24;UBERON:0001557!4.36e-08!24;UBERON:0001042!4.36e-08!24;UBERON:0008814!4.36e-08!24;UBERON:0009145!4.36e-08!24;UBERON:0002370!1.46e-07!23;UBERON:0000974!1.46e-07!23;UBERON:0004807!1.46e-07!23;UBERON:0005058!1.46e-07!23;UBERON:0003351!1.46e-07!23;UBERON:0009113!1.46e-07!23;UBERON:0003295!1.46e-07!23;UBERON:0009722!1.46e-07!23;UBERON:0005562!1.46e-07!23;UBERON:0007690!1.46e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,3.60e-08,36;UBERON:0006562,4.36e-08,24;UBERON:0001557,4.36e-08,24;UBERON:0001042,4.36e-08,24;UBERON:0008814,4.36e-08,24;UBERON:0009145,4.36e-08,24;UBERON:0000077,8.14e-08,35;UBERON:0002370,1.46e-07,23;UBERON:0000974,1.46e-07,23;UBERON:0004807,1.46e-07,23;UBERON:0005058,1.46e-07,23;UBERON:0003351,1.46e-07,23;UBERON:0009113,1.46e-07,23;UBERON:0003295,1.46e-07,23;UBERON:0009722,1.46e-07,23;UBERON:0005562,1.46e-07,23;UBERON:0007690,1.46e-07,23;UBERON:0000153,8.24e-07,43 | |||
|phase1_expression=24.3426247599287,60.3727455216095,59.6049003600292,37.8080264133538,48.0859900748493,36.4298020048801,31.3040938398004,64.8199083676713,88.1337400669434,95.0301976867294,46.9137232937884,51.453042551992,40.745773723627,46.5950744893256,25.3163418979904,26.726735295457,25.1842276126133,30.4420989570699,34.9641805694634,20.3707032863054,33.4220130293704,16.7801707529496,15.4107875591972,22.8789164594572,24.31738379312,47.0870210574317,34.0301976965669,36.1991670912294,14.251756459228,23.4388020676736,19.7340154483221,12.065582795733,15.3766196896143,0,14.731432607315,13.6312409193964,18.783580776138,34.7381253511633,20.3147189576188,26.1761871986899,108.234593797707,74.4519578604706,40.2973593015858,24.9275699591643,28.0814099478055,34.3232426542344,13.3006528539167,10.247182349881,12.0827400503959,19.2485600083541,8.9591309840232,5.75010257459886,45.4690862416466,71.0854899171118,56.1276644567915,38.846174841428,29.2264108737532,24.2365883370398,24.8849246857305,17.9856932952491,20.9164363157039,14.2314703469035,14.2287167377782,16.6481447697059,11.8663963508037,10.6572017241915,9.88680364710736,17.6740420447915,29.1367810586822,19.0358373047684,27.3422449756797,18.852964970651,16.565140571371,25.1106138390656,16.7729574281914,17.4651569455904,23.1243350098716,23.7498448838449,23.1945865216928,20.7061471736404,21.8655468209759,28.129322010065,15.9134309430787,16.8828783009504,22.6141406709679,27.4004584490511,30.8946547334053,27.2143190904939,40.3620610465871,24.1073276740646,35.943196599008,13.7667820317022,31.9586526842643,17.2705021324101,15.5946340187441,16.5769948226014,34.1279940920157,26.9279909673331,21.822024386641,24.7337702157238,22.3941037444922,53.8971205140135,84.0857291031931,92.4386714099331,19.2677026499981,19.0019899106324,19.7154533555765,27.0615794934172,37.8049310124871,25.9773743363443,18.0424739836781,9.74289530598852,16.6043158024362,15.6751546174727,19.7549027987984,17.2163230121655,26.449861547578,36.8728360145775,21.230653246797,25.8826959915855,29.8136049921531,30.547140947519,14.9113408974498,26.6430525280508,15.9179497178226,18.3929079750186,24.5621005237137,19.7967901227825,25.7952560958321,22.4685959107234,18.3000241127451,30.7853162676518,21.7280400240346,20.4572365864264,18.0775598766817,18.6577452527921,21.895463227818,22.766475621647,16.6797020566225,25.6739064181498,23.291559290324,28.0480567408837,30.9706863265201,29.086029842293,25.8538696775046,29.9786105466548,33.170410494144,24.0594134787285,23.281343236747,28.9332302656763,23.4014995138052,19.9468116509093,20.019401944243,21.5916343243743,19.5493029587546,17.3159812132089,14.7464769335779,15.1835265197682,17.6181369625267,24.8550927042602,19.465662978431,21.6074473753218,19.6498130535725,23.0214151144462,24.065669610431,25.3461999777945,25.4859731329638,23.8201298429026,28.7979737348591,28.5651387497626,36.4809642956351,35.5265969443558,36.0062189077323,32.3437469212496,30.4920425417985,28.1958637919239,23.1293148088659,21.9493970330742,21.5421133040586,23.6881405297647,23.0672755766547,18.1515172161008,18.2349995952794,16.9300807240178,21.353807769503,21.2461651593974,16.5881237808178,16.1154742353332,19.6913727990311,23.3693046250098,18.8040103390984,20.1132685986911,14.035424670528,23.4209450849944,28.1769339182701,27.900231914808,22.6924409986122,18.6561280908247,27.1284744263064,23.3224033807771,19.3108435244891,15.7948369819905,19.5658733877518,18.6866518402025,21.4249304673391,15.9652099793246,18.8659912891308,19.2941727801933,16.0414286622294,15.5355914223438,13.943629502653,14.5517548989683,21.5652309791032,18.6070473834252,23.402825483592,21.9743623813987,21.3482922091076,18.332853811808,29.3757572364901,23.6864264713106,25.096606372072,26.140743209379,20.8874320976767,24.1209010716215,20.9478403979692,30.6359827136744,23.4876364718225,21.4820748959312,27.2667654404303,28.5122167605384,23.6578425156277,25.168936193183,28.6503439484617,14.6854534631052,15.7364567366092,20.9711927191597,20.2293743384618,17.2301179290539,21.8033477350978,48.2219470960352,27.4492150892143,31.2350995437311,22.6194567619439,28.6762557543062,29.8550223270408,39.3476377796477,27.5271277138928,30.9791209385991,28.8560077900962,24.7417413644791,19.8716119291576,14.4233138970477,23.7814960656221,27.2200702904683,15.9294166007955,14.3240575331439,14.2092071773433,17.1630622577867,11.8120757152309,17.2163682848599,23.5169746783081,21.0849563096953,20.3203505679291,20.8584260237639,14.7586052004998,26.8152412445286,18.0432991049508,27.1892251987278,11.7716402242307,22.7197257133488,23.2315706071378,21.7609957474526,17.4421961838248,11.2652031172402,26.9872464273267,33.6812992673474,29.109748543255,41.7162219941944,22.6050197374268,31.4230338875692,25.4263092726681,24.128712262524,20.1121777274597,22.0656109392507,21.7006018613273,19.4003655885429,24.2604830854322,22.6042148405629,22.5545475739692,25.8519335723371,30.0861821089124,36.1074746995038,33.7207936082794,10.5013767981662,22.4598555442606,22.1618219168265,22.7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| |phase1_expression=24.3426247599287,60.3727455216095,59.6049003600292,37.8080264133538,48.0859900748493,36.4298020048801,31.3040938398004,64.8199083676713,88.1337400669434,95.0301976867294,46.9137232937884,51.453042551992,40.745773723627,46.5950744893256,25.3163418979904,26.726735295457,25.1842276126133,30.4420989570699,34.9641805694634,20.3707032863054,33.4220130293704,16.7801707529496,15.4107875591972,22.8789164594572,24.31738379312,47.0870210574317,34.0301976965669,36.1991670912294,14.251756459228,23.4388020676736,19.7340154483221,12.065582795733,15.3766196896143,0,14.731432607315,13.6312409193964,18.783580776138,34.7381253511633,20.3147189576188,26.1761871986899,108.234593797707,74.4519578604706,40.2973593015858,24.9275699591643,28.0814099478055,34.3232426542344,13.3006528539167,10.247182349881,12.0827400503959,19.2485600083541,8.9591309840232,5.75010257459886,45.4690862416466,71.0854899171118,56.1276644567915,38.846174841428,29.2264108737532,24.2365883370398,24.8849246857305,17.9856932952491,20.9164363157039,14.2314703469035,14.2287167377782,16.6481447697059,11.8663963508037,10.6572017241915,9.88680364710736,17.6740420447915,29.1367810586822,19.0358373047684,27.3422449756797,18.852964970651,16.565140571371,25.1106138390656,16.7729574281914,17.4651569455904,23.1243350098716,23.7498448838449,23.1945865216928,20.7061471736404,21.8655468209759,28.129322010065,15.9134309430787,16.8828783009504,22.6141406709679,27.4004584490511,30.8946547334053,27.2143190904939,40.3620610465871,24.1073276740646,35.943196599008,13.7667820317022,31.9586526842643,17.2705021324101,15.5946340187441,16.5769948226014,34.1279940920157,26.9279909673331,21.822024386641,24.7337702157238,22.3941037444922,53.8971205140135,84.0857291031931,92.4386714099331,19.2677026499981,19.0019899106324,19.7154533555765,27.0615794934172,37.8049310124871,25.9773743363443,18.0424739836781,9.74289530598852,16.6043158024362,15.6751546174727,19.7549027987984,17.2163230121655,26.449861547578,36.8728360145775,21.230653246797,25.8826959915855,29.8136049921531,30.547140947519,14.9113408974498,26.6430525280508,15.9179497178226,18.3929079750186,24.5621005237137,19.7967901227825,25.7952560958321,22.4685959107234,18.3000241127451,30.7853162676518,21.7280400240346,20.4572365864264,18.0775598766817,18.6577452527921,21.895463227818,22.766475621647,16.6797020566225,25.6739064181498,23.291559290324,28.0480567408837,30.9706863265201,29.086029842293,25.8538696775046,29.9786105466548,33.170410494144,24.0594134787285,23.281343236747,28.9332302656763,23.4014995138052,19.9468116509093,20.019401944243,21.5916343243743,19.5493029587546,17.3159812132089,14.7464769335779,15.1835265197682,17.6181369625267,24.8550927042602,19.465662978431,21.6074473753218,19.6498130535725,23.0214151144462,24.065669610431,25.3461999777945,25.4859731329638,23.8201298429026,28.7979737348591,28.5651387497626,36.4809642956351,35.5265969443558,36.0062189077323,32.3437469212496,30.4920425417985,28.1958637919239,23.1293148088659,21.9493970330742,21.5421133040586,23.6881405297647,23.0672755766547,18.1515172161008,18.2349995952794,16.9300807240178,21.353807769503,21.2461651593974,16.5881237808178,16.1154742353332,19.6913727990311,23.3693046250098,18.8040103390984,20.1132685986911,14.035424670528,23.4209450849944,28.1769339182701,27.900231914808,22.6924409986122,18.6561280908247,27.1284744263064,23.3224033807771,19.3108435244891,15.7948369819905,19.5658733877518,18.6866518402025,21.4249304673391,15.9652099793246,18.8659912891308,19.2941727801933,16.0414286622294,15.5355914223438,13.943629502653,14.5517548989683,21.5652309791032,18.6070473834252,23.402825483592,21.9743623813987,21.3482922091076,18.332853811808,29.3757572364901,23.6864264713106,25.096606372072,26.140743209379,20.8874320976767,24.1209010716215,20.9478403979692,30.6359827136744,23.4876364718225,21.4820748959312,27.2667654404303,28.5122167605384,23.6578425156277,25.168936193183,28.6503439484617,14.6854534631052,15.7364567366092,20.9711927191597,20.2293743384618,17.2301179290539,21.8033477350978,48.2219470960352,27.4492150892143,31.2350995437311,22.6194567619439,28.6762557543062,29.8550223270408,39.3476377796477,27.5271277138928,30.9791209385991,28.8560077900962,24.7417413644791,19.8716119291576,14.4233138970477,23.7814960656221,27.2200702904683,15.9294166007955,14.3240575331439,14.2092071773433,17.1630622577867,11.8120757152309,17.2163682848599,23.5169746783081,21.0849563096953,20.3203505679291,20.8584260237639,14.7586052004998,26.8152412445286,18.0432991049508,27.1892251987278,11.7716402242307,22.7197257133488,23.2315706071378,21.7609957474526,17.4421961838248,11.2652031172402,26.9872464273267,33.6812992673474,29.109748543255,41.7162219941944,22.6050197374268,31.4230338875692,25.4263092726681,24.128712262524,20.1121777274597,22.0656109392507,21.7006018613273,19.4003655885429,24.2604830854322,22.6042148405629,22.5545475739692,25.8519335723371,30.0861821089124,36.1074746995038,33.7207936082794,10.5013767981662,22.4598555442606,22.1618219168265,22.7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| ||
|short_description=p2@Kpna4 | |||
}} | }} |
Latest revision as of 16:31, 25 September 2015
Short description: | p2@Kpna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kpna4_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_008467, uc008pme.1_5end |
EntrezGene: | Kpna4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.73e-07 | 9 |
alpha-beta T cell | 4.73e-07 | 9 |
immature T cell | 4.73e-07 | 9 |
mature T cell | 4.73e-07 | 9 |
immature alpha-beta T cell | 4.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 3.60e-08 | 36 |
pharynx | 4.36e-08 | 24 |
upper respiratory tract | 4.36e-08 | 24 |
chordate pharynx | 4.36e-08 | 24 |
pharyngeal arch system | 4.36e-08 | 24 |
pharyngeal region of foregut | 4.36e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 8.14e-08 | 35 |
thymus | 1.46e-07 | 23 |
neck | 1.46e-07 | 23 |
respiratory system epithelium | 1.46e-07 | 23 |
hemolymphoid system gland | 1.46e-07 | 23 |
pharyngeal epithelium | 1.46e-07 | 23 |
thymic region | 1.46e-07 | 23 |
pharyngeal gland | 1.46e-07 | 23 |
entire pharyngeal arch endoderm | 1.46e-07 | 23 |
thymus primordium | 1.46e-07 | 23 |
early pharyngeal endoderm | 1.46e-07 | 23 |
anterior region of body | 8.24e-07 | 43 |