FFCP PHASE1:Mm9::chr3:68930989..68931007,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:68930989..68931007,- to FFCP PHASE1:Mm9::chr3:68930989..68931007,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16649 | |EntrezGene=16649 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35343,Q4FJX1 | |UniProt=O35343,Q4FJX1 | ||
|association_with_transcript=6bp_to_NM_008467,uc008pme.1_5end | |||
|cluster_id=chr3:68930989..68931007,- | |||
|description=CAGE_peak_1_at_Kpna4_5end | |||
|id=chr3:68930989..68931007,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.32e-09!29;UBERON:0006562!3.26e-08!24;UBERON:0001557!3.26e-08!24;UBERON:0001042!3.26e-08!24;UBERON:0008814!3.26e-08!24;UBERON:0009145!3.26e-08!24;UBERON:0000065!7.89e-08!41;UBERON:0002370!1.00e-07!23;UBERON:0000974!1.00e-07!23;UBERON:0004807!1.00e-07!23;UBERON:0005058!1.00e-07!23;UBERON:0003351!1.00e-07!23;UBERON:0009113!1.00e-07!23;UBERON:0003295!1.00e-07!23;UBERON:0009722!1.00e-07!23;UBERON:0005562!1.00e-07!23;UBERON:0007690!1.00e-07!23;UBERON:0001004!3.11e-07!42;UBERON:0003408!6.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.76e-10,35;UBERON:0004177,4.32e-09,29;UBERON:0005057,4.32e-09,29;UBERON:0006562,3.26e-08,24;UBERON:0001557,3.26e-08,24;UBERON:0001042,3.26e-08,24;UBERON:0008814,3.26e-08,24;UBERON:0009145,3.26e-08,24;UBERON:0000065,7.89e-08,41;UBERON:0002370,1.00e-07,23;UBERON:0000974,1.00e-07,23;UBERON:0004807,1.00e-07,23;UBERON:0005058,1.00e-07,23;UBERON:0003351,1.00e-07,23;UBERON:0009113,1.00e-07,23;UBERON:0003295,1.00e-07,23;UBERON:0009722,1.00e-07,23;UBERON:0005562,1.00e-07,23;UBERON:0007690,1.00e-07,23;UBERON:0001004,3.11e-07,42;UBERON:0003408,6.68e-07,24 | |||
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| |phase1_expression=26.1042620780814,50.6014341077074,45.4999239389536,41.4375969490357,50.0895729946347,39.4516288992941,38.5460856982617,46.0970264686427,33.7892933164,41.6634856853148,34.928465518003,48.6610169871552,43.313784672595,50.2667313909235,26.9818907070687,33.0034685845416,25.1842276126133,43.2183166540786,44.1508476210479,29.2828859740641,50.3456277694333,22.6383368738018,14.1047886135025,25.1188103785648,19.9586074528438,46.5127890933166,39.1993416504758,38.1384081854024,21.4726463985703,32.2598566092711,24.3903561720835,10.7955214488137,12.3012957516914,15.8481681015439,21.086168241843,24.9351968037739,30.8295727956177,62.7797446105362,41.4107732597614,51.828850653406,99.4111214772414,71.0367304356784,71.8555322486107,25.0534667771399,24.7359712175616,20.74078299427,6.25913075478431,5.66865406589161,6.81027166476863,10.304784650937,11.4788865732797,4.31257693094915,42.7845645447228,46.423177088726,41.0034434953806,30.3566134522417,26.6476099143044,14.9544906760458,19.0177473208022,19.5726662330652,18.3811107016792,12.5372476865579,6.22506357277798,13.0485459005803,7.9109309005358,14.209602298922,7.78960287347852,9.22123932771731,20.6342328493871,17.010748229793,18.9292465216244,13.9968982357864,11.9269012113871,18.1286382838132,15.0477389498631,12.8690630125403,9.91042928994498,20.3022867555448,21.3513081226178,16.2220133908138,16.4677758484337,15.106487746146,16.1926139420801,14.6318278608237,18.6413862287708,25.0434297652618,21.0710087582672,22.927131836512,26.4284414732812,25.3164726357731,26.6675329605544,12.0459342777394,6.11974200336975,18.8896117073236,11.695975514058,9.40856462904405,30.1955503283267,27.0984212899112,20.2633083590238,20.8470348961101,24.6475984609191,61.5967091588726,38.2207859559969,35.5533351576666,13.2059535016841,20.7755089689581,16.1767822404731,31.0580152835843,59.8146511224967,24.7898372238257,20.6447538851702,19.485790611977,18.4492397804847,18.5388847879726,18.6966044345771,21.3633205260448,35.8432703214842,41.6446147929346,20.3460426948471,22.8091258425847,33.3470692875194,33.9412677194656,33.550517019262,32.4986684682817,27.4375185925626,24.7793343552334,26.5989576403143,23.9961092397363,25.0328347333937,26.213361895844,18.7575247155637,25.8847965352501,22.4233373048037,26.0829766476937,21.8177446787538,21.7403292510795,18.5347642207576,28.9868241521517,19.9650979162603,30.0931853917658,20.4289095451445,19.3117767724117,22.687828355474,25.0169997607287,21.6356067301223,22.5480147701336,19.3025552593041,30.7857011179429,14.2274875335676,19.6670323374532,19.0027214097065,21.4811817779023,25.8583941779806,23.6811473235073,27.9863705514803,19.1072896145753,18.2575428701441,18.7863972193742,25.2905514462077,19.0555710732662,27.4395490177883,20.7071370680167,22.490749880595,19.479658942993,24.2199367233184,18.835249524783,24.9494263301646,18.7992201211143,22.0510198884064,26.9234641089716,32.6707302469799,32.1639972335731,34.469368100695,27.780728683397,27.9685631590289,27.7842453424068,33.7027158643474,28.2962106329992,21.3288250535234,22.5269571704625,22.4229382700442,18.9582513145942,19.3468898145037,21.3052701246066,29.8953308773042,21.7402620235694,22.1174983744237,23.4768637008558,28.2697926322724,27.8634016682809,23.5590474363417,20.5115511451998,11.1904061562318,24.1064361606528,24.7957018480777,24.641810669283,23.4682509472827,19.7081653891795,25.3578513868272,30.1124701878388,23.0788129926821,17.5223972768957,16.8977997439675,26.1946815974268,20.2455764966599,21.586762788946,22.5174734741238,19.7765270996982,19.8608164389507,24.1664755458681,16.6999283578286,18.6701760967895,18.6898668485561,17.8627654880882,19.3463357331028,17.6805214562978,24.0392534119362,17.8504102904446,34.7335997513217,23.4969350595401,17.9261474086228,25.292017780503,22.2955735874077,24.4559135865051,24.5184950112594,29.4651808265276,38.9358805942292,32.7767740680187,33.0071371120998,39.9826487906401,35.0550513187768,34.5711250009813,10.5553898757491,17.9488875660174,16.7199852826472,24.0064969285117,27.1330497079368,26.9586879162067,15.9016897015375,45.4447668967871,20.8235424814729,15.2271110275689,16.1567548299599,21.2682230177771,24.285055474981,22.3630459323178,20.6453457854196,17.82760733259,24.1125544547379,27.3123118958536,22.1426532924899,15.4917075190512,20.1979829598434,25.570369060743,29.2039304347918,16.5090832585387,15.7208249621671,16.597247018519,13.2885851796348,14.4494519533646,31.528251766523,20.7214225802178,19.6073558111597,19.9103157499564,28.4630243152497,33.0033738394198,24.5116516142727,20.5269647195694,11.2542054890996,20.5763553630329,21.8128487379996,20.8691516594423,17.9358432456312,14.0053876592716,33.0887108369832,34.5286275508027,28.668691747145,48.6414446177366,29.3865256586548,33.5339862600547,32.4692775688531,31.8433345505419,28.8566028263552,26.1449675834819,35.1994014443577,21.6706211361384,32.2238477623298,29.5738477497365,38.137689534166,32.9440569417393,26.1766782190537,23.0919896334036,30.9567941321909,17.184071124272,19.1383276116587,19.3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| ||
|short_description=p1@Kpna4 | |||
}} | }} |
Latest revision as of 16:31, 25 September 2015
Short description: | p1@Kpna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kpna4_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_NM_008467, uc008pme.1_5end |
EntrezGene: | Kpna4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 1.76e-10 | 35 |
hemopoietic organ | 4.32e-09 | 29 |
immune organ | 4.32e-09 | 29 |
pharynx | 3.26e-08 | 24 |
upper respiratory tract | 3.26e-08 | 24 |
chordate pharynx | 3.26e-08 | 24 |
pharyngeal arch system | 3.26e-08 | 24 |
pharyngeal region of foregut | 3.26e-08 | 24 |
respiratory tract | 7.89e-08 | 41 |
thymus | 1.00e-07 | 23 |
neck | 1.00e-07 | 23 |
respiratory system epithelium | 1.00e-07 | 23 |
hemolymphoid system gland | 1.00e-07 | 23 |
pharyngeal epithelium | 1.00e-07 | 23 |
thymic region | 1.00e-07 | 23 |
pharyngeal gland | 1.00e-07 | 23 |
entire pharyngeal arch endoderm | 1.00e-07 | 23 |
thymus primordium | 1.00e-07 | 23 |
early pharyngeal endoderm | 1.00e-07 | 23 |
respiratory system | 3.11e-07 | 42 |
gland of gut | 6.68e-07 | 24 |