FFCP PHASE1:Mm9::chr8:72897440..72897457,+: Difference between revisions
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{{FFCP|EntrezGene=12845|HGNC=|MCL_coexpression_id=225|UniProt=G3X8Q4,F6QIF5,Q9R0G6,A1A557|association_with_transcript=0bp_to_ENSMUST00000003659,ENSMUST00000167052,NM_016685,uc009mad.2_5end|description=CAGE_peak_1_at_Comp_5end|id=chr8:72897440..72897457,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.85e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000026,1.43e-10,12;UBERON:0004708,1.43e-10,12;UBERON:0002101,1.43e-10,12;UBERON:0004357,1.43e-10,12;UBERON:0004347,1.43e-10,12;UBERON:0005732,1.43e-10,12;UBERON:0005733,1.43e-10,12;UBERON:0003102,2.89e-10,22;UBERON:0010707,1.94e-09,13;UBERON:0007100,3.73e-08,18;UBERON:0000948,3.73e-08,18;UBERON:0005498,3.73e-08,18;UBERON:0004140,3.73e-08,18;UBERON:0009881,3.73e-08,18;UBERON:0004141,3.73e-08,18;UBERON:0003084,3.73e-08,18;UBERON:0007005,3.73e-08,18;UBERON:0004139,3.73e-08,18;UBERON:0004291,3.73e-08,18;UBERON:0004535,1.78e-07,23;UBERON:0001009,1.78e-07,23|phase1_expression=0.160148847104794,0,0,0,0,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0,0,1.27993938234725,1.60586496747019,0,2.15380998079537,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,1.52617609466313,58.8758969728384,28.1923353657711,1.39986421625363,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,0.338844532069132,4.4464739805557,0,0,0,0,0,0,0,0,1.14260393761521,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.854230084794618,0.372798891650601,0,0,3.47837386442013,0,0,0,0,0,32.3022166303029,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,57.8436224498435,14.6045350489111,122.076256169083,425.608582211634,251.759331044849,352.989184282442,0,1.17112318804619,0.41889341362691,0.510914110417183,0,0,0.127070227073065,0.599162557619291,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,0.305518091550949,224.056954068778,0,12.2056276414155,0,0,0,0.452114453507145,0.408218994907967,0.512454881139399,0.937017245597288,6.72628763921441,0,4.72765200419548,19.7065259063623,86.3631185764645,81.1897967738746,175.519091927172,233.974289095832,0.199034266818493,0,0,0,1.24275463521301,3.51789089971644,2.52086886045421,2.3674473558521,2.75469924446365,2.46827380619805,2.32533944750408,2.68273401399619,3.97002164048376,7.24063339619314,8.70087559619205,10.9442892886905,19.0059983652932,22.3941117596872,22.2782655142217,0.420579897128254,0.205809224758569,0.330418782983798,0,0.213288250535234,0,0.644337306610467,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.252946148497029,0.147610147979602,0.627994911365499,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0.811440485554012,1.4470629585145,4.32863948028414,9.49397253587675,4.86405680325106,0.823684239564244,0,0.744281895337007,0,0,0.896987067609561,0,0.369506380333209,0.947457058852424,0,0.169745085775188,0,0,1.19021820443007,0.780534591431195,0.945810864637146,1.10732344824387,1.2756381492599,1.47476983244164,2.93564469172023,0.433947175744535,0,0,0,0,0.321101179975584,0.35163505977661,0,81.5481094870125,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,1.98716119291576,0.890328018336276,0.162886959353576,0.494910368917606,0,0.728341908464944,0,0.565815239267694,4.13422650033082,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0,0,0,0,0,0.258717367565509,3.42939256050548,0.886701168211368,3.74574516964348,2.30368628842969,3.34911444026059,0.938686832254841,0.847328283455281,0.220528398054962,1.15420377059036,0.322928853391811,12.2435237604156,4.8942661041286,7.71462228801788,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.87345025498471,0.269728692769641,0.247960367176008,1.04702376793612,0.777689839750757,2.4853572523477,1.69107881605257,0.299033092087958,0,0.388902376688095,0,0,0,0.13020438484395,0.104859344425711,0,1.15212002503146,0.316011120628178,0.202725215290164,0.821687657318618,0.129920822977795,0.537080087002444,1.39076948346885,0.240390899039938,0.147689527174577,0.605798699688886,0.685861259894999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,11.1097887971454,0.221985953374065,0.0897138566094757,0.671538465456314,0.19318959403219,0.750729901804728,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.103787347584177,0,10.2440163452481,53.4834777550247,22.0093820759381,20.9581599633016,3.77819437262746,5.97501665992793,5.45562656306086,4.2958525999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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12845 | |||
|HGNC= | |||
|MCL_coexpression_id=225 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8Q4,F6QIF5,Q9R0G6,A1A557 | |||
|association_with_transcript=0bp_to_ENSMUST00000003659,ENSMUST00000167052,NM_016685,uc009mad.2_5end | |||
|cluster_id=chr8:72897440..72897457,+ | |||
|description=CAGE_peak_1_at_Comp_5end | |||
|id=chr8:72897440..72897457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.85e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,1.43e-10,12;UBERON:0004708,1.43e-10,12;UBERON:0002101,1.43e-10,12;UBERON:0004357,1.43e-10,12;UBERON:0004347,1.43e-10,12;UBERON:0005732,1.43e-10,12;UBERON:0005733,1.43e-10,12;UBERON:0003102,2.89e-10,22;UBERON:0010707,1.94e-09,13;UBERON:0007100,3.73e-08,18;UBERON:0000948,3.73e-08,18;UBERON:0005498,3.73e-08,18;UBERON:0004140,3.73e-08,18;UBERON:0009881,3.73e-08,18;UBERON:0004141,3.73e-08,18;UBERON:0003084,3.73e-08,18;UBERON:0007005,3.73e-08,18;UBERON:0004139,3.73e-08,18;UBERON:0004291,3.73e-08,18;UBERON:0004535,1.78e-07,23;UBERON:0001009,1.78e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0,0,1.27993938234725,1.60586496747019,0,2.15380998079537,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,1.52617609466313,58.8758969728384,28.1923353657711,1.39986421625363,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,0.338844532069132,4.4464739805557,0,0,0,0,0,0,0,0,1.14260393761521,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.854230084794618,0.372798891650601,0,0,3.47837386442013,0,0,0,0,0,32.3022166303029,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.125666591329675,57.8436224498435,14.6045350489111,122.076256169083,425.608582211634,251.759331044849,352.989184282442,0,1.17112318804619,0.41889341362691,0.510914110417183,0,0,0.127070227073065,0.599162557619291,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,0.305518091550949,224.056954068778,0,12.2056276414155,0,0,0,0.452114453507145,0.408218994907967,0.512454881139399,0.937017245597288,6.72628763921441,0,4.72765200419548,19.7065259063623,86.3631185764645,81.1897967738746,175.519091927172,233.974289095832,0.199034266818493,0,0,0,1.24275463521301,3.51789089971644,2.52086886045421,2.3674473558521,2.75469924446365,2.46827380619805,2.32533944750408,2.68273401399619,3.97002164048376,7.24063339619314,8.70087559619205,10.9442892886905,19.0059983652932,22.3941117596872,22.2782655142217,0.420579897128254,0.205809224758569,0.330418782983798,0,0.213288250535234,0,0.644337306610467,0,0,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.252946148497029,0.147610147979602,0.627994911365499,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0.811440485554012,1.4470629585145,4.32863948028414,9.49397253587675,4.86405680325106,0.823684239564244,0,0.744281895337007,0,0,0.896987067609561,0,0.369506380333209,0.947457058852424,0,0.169745085775188,0,0,1.19021820443007,0.780534591431195,0.945810864637146,1.10732344824387,1.2756381492599,1.47476983244164,2.93564469172023,0.433947175744535,0,0,0,0,0.321101179975584,0.35163505977661,0,81.5481094870125,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,1.98716119291576,0.890328018336276,0.162886959353576,0.494910368917606,0,0.728341908464944,0,0.565815239267694,4.13422650033082,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0,0,0,0,0,0.258717367565509,3.42939256050548,0.886701168211368,3.74574516964348,2.30368628842969,3.34911444026059,0.938686832254841,0.847328283455281,0.220528398054962,1.15420377059036,0.322928853391811,12.2435237604156,4.8942661041286,7.71462228801788,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.87345025498471,0.269728692769641,0.247960367176008,1.04702376793612,0.777689839750757,2.4853572523477,1.69107881605257,0.299033092087958,0,0.388902376688095,0,0,0,0.13020438484395,0.104859344425711,0,1.15212002503146,0.316011120628178,0.202725215290164,0.821687657318618,0.129920822977795,0.537080087002444,1.39076948346885,0.240390899039938,0.147689527174577,0.605798699688886,0.685861259894999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,11.1097887971454,0.221985953374065,0.0897138566094757,0.671538465456314,0.19318959403219,0.750729901804728,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0.103787347584177,0,10.2440163452481,53.4834777550247,22.0093820759381,20.9581599633016,3.77819437262746,5.97501665992793,5.45562656306086,4.29585259998456,2.78827229879264,3.58390048633545,3.55837728385553,3.07320731543373,3.79074095107048,1.42888107384922,3.36064545240081,2.89363830695558,2.47251540481984,3.53277408322554,6.51451579532289,3.90446773550542,2.14592570952589,3.63366041580821,3.19971893412124,3.21535509988371,3.10977553883713,3.94604567156764,5.02475221229689,5.61142271657738,3.08451047122853,4.13718825977367,1.63692417267876,2.63392630016142,73.4974187838149,51.4609790552169,49.5935009904266,55.0069898363644,216.347103569862,316.107503598266,252.96780866188 | |||
|short_description=p1@Comp | |||
}} |
Latest revision as of 17:28, 25 September 2015
Short description: | p1@Comp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Comp_5end |
Coexpression cluster: | MCL_coexpression_mm9:225 |
Association with transcript: | 0bp_to_ENSMUST00000003659, ENSMUST00000167052, NM_016685, uc009mad.2_5end |
EntrezGene: | Comp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 1.43e-10 | 12 |
paired limb/fin | 1.43e-10 | 12 |
limb | 1.43e-10 | 12 |
paired limb/fin bud | 1.43e-10 | 12 |
limb bud | 1.43e-10 | 12 |
limb/fin field | 1.43e-10 | 12 |
limb field | 1.43e-10 | 12 |
surface structure | 2.89e-10 | 22 |
appendage girdle complex | 1.94e-09 | 13 |
primary circulatory organ | 3.73e-08 | 18 |
heart | 3.73e-08 | 18 |
primitive heart tube | 3.73e-08 | 18 |
primary heart field | 3.73e-08 | 18 |
anterior lateral plate mesoderm | 3.73e-08 | 18 |
heart tube | 3.73e-08 | 18 |
heart primordium | 3.73e-08 | 18 |
cardiac mesoderm | 3.73e-08 | 18 |
cardiogenic plate | 3.73e-08 | 18 |
heart rudiment | 3.73e-08 | 18 |
cardiovascular system | 1.78e-07 | 23 |
circulatory system | 1.78e-07 | 23 |