FFCP PHASE1:Mm9::chr19:40457627..40457636,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20411 | |EntrezGene=20411 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-306bp_to_uc008hkv.1_5end | |association_with_transcript=-306bp_to_uc008hkv.1_5end | ||
|cluster_id=chr19:40457627..40457636,- | |||
|description=CAGE_peak_9_at_Sorbs1_5end | |description=CAGE_peak_9_at_Sorbs1_5end | ||
|id=chr19:40457627..40457636,- | |id=chr19:40457627..40457636,- | ||
|ontology_enrichment_celltype=CL:0000333!2.02e-19!10;CL:0000095!2.02e-19!10;CL:0000243!2.02e-19!10;CL:0000123!2.02e-19!10;CL:0000125!2.02e-19!10;CL:0000030!2.02e-19!10;CL:0000339!2.02e-19!10;CL:0002453!3.97e-18!8;CL:0000128!1.41e-11!6;CL:0000126!1.41e-11!6;CL:0000127!1.41e-11!6;CL:0002604!2.00e-09!2;CL:0002605!2.00e-09!2;CL:0000864!1.13e-08!2;CL:0000878!1.13e-08!2;CL:0000129!1.13e-08!2 | |ontology_enrichment_celltype=CL:0000333!2.02e-19!10;CL:0000095!2.02e-19!10;CL:0000243!2.02e-19!10;CL:0000123!2.02e-19!10;CL:0000125!2.02e-19!10;CL:0000030!2.02e-19!10;CL:0000339!2.02e-19!10;CL:0002453!3.97e-18!8;CL:0000128!1.41e-11!6;CL:0000126!1.41e-11!6;CL:0000127!1.41e-11!6;CL:0002604!2.00e-09!2;CL:0002605!2.00e-09!2;CL:0000864!1.13e-08!2;CL:0000878!1.13e-08!2;CL:0000129!1.13e-08!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.42e-46,6;CL:0000126,1.42e-46,6;CL:0000127,1.42e-46,6;CL:0002605,3.18e-35,2;CL:0002604,3.18e-35,2;CL:0002453,3.57e-35,8;CL:0000333,2.53e-28,10;CL:0000095,2.53e-28,10;CL:0000243,2.53e-28,10;CL:0000123,2.53e-28,10;CL:0000125,2.53e-28,10;CL:0000030,2.53e-28,10;CL:0000339,2.53e-28,10;CL:0002603,3.37e-10,2;CL:0002319,4.09e-07,43;CL:0000221,5.77e-07,44;CL:0000133,5.77e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.61e-13!3;UBERON:0000478!8.61e-13!3;UBERON:0000158!8.61e-13!3;UBERON:0005795!7.38e-10!4;UBERON:0000995!7.38e-10!4;UBERON:0001987!3.48e-09!2;UBERON:0003124!3.48e-09!2;UBERON:0004340!3.48e-09!2;UBERON:0003975!5.70e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.02e-11,7;UBERON:0003022,7.02e-11,7;UBERON:0002421,7.02e-11,7;UBERON:0000349,7.02e-11,7;UBERON:0002600,7.02e-11,7;UBERON:0001987,4.13e-10,2;UBERON:0003124,4.13e-10,2;UBERON:0004340,4.13e-10,2;UBERON:0005631,3.64e-07,3;UBERON:0000478,3.64e-07,3;UBERON:0000158,3.64e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.19686182734472,2.72201858703997,2.2397827460058,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0.42366414172764,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.19686182734472,2.72201858703997,2.2397827460058,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0.42366414172764,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@Sorbs1 | |short_description=p9@Sorbs1 | ||
}} | }} |
Latest revision as of 17:49, 25 September 2015
Short description: | p9@Sorbs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Sorbs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | -306bp_to_uc008hkv.1_5end |
EntrezGene: | Sorbs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.42e-46 | 6 |
macroglial cell | 1.42e-46 | 6 |
astrocyte | 1.42e-46 | 6 |
astrocyte of the cerebral cortex | 3.18e-35 | 2 |
astrocyte of the hippocampus | 3.18e-35 | 2 |
oligodendrocyte precursor cell | 3.57e-35 | 8 |
migratory neural crest cell | 2.53e-28 | 10 |
neuron associated cell | 2.53e-28 | 10 |
glial cell (sensu Vertebrata) | 2.53e-28 | 10 |
neuron associated cell (sensu Vertebrata) | 2.53e-28 | 10 |
glial cell | 2.53e-28 | 10 |
glioblast | 2.53e-28 | 10 |
glioblast (sensu Vertebrata) | 2.53e-28 | 10 |
astrocyte of the cerebellum | 3.37e-10 | 2 |
neural cell | 4.09e-07 | 43 |
ectodermal cell | 5.77e-07 | 44 |
neurectodermal cell | 5.77e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.02e-11 | 7 |
lobe parts of cerebral cortex | 7.02e-11 | 7 |
hippocampal formation | 7.02e-11 | 7 |
limbic system | 7.02e-11 | 7 |
limbic lobe | 7.02e-11 | 7 |
placenta | 4.13e-10 | 2 |
chorion | 4.13e-10 | 2 |
allantois | 4.13e-10 | 2 |
extraembryonic membrane | 3.64e-07 | 3 |
extraembryonic structure | 3.64e-07 | 3 |
membranous layer | 3.64e-07 | 3 |