FFCP PHASE1:Mm9::chr3:83844022..83844069,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:83844022..83844069,-
|short_description=p1@D930015E06Rik
|description=CAGE_peak_1_at_D930015E06Rik_5end
|association_with_transcript=13bp_to_ENSMUST0000004...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=229473 | |EntrezGene=229473 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3U3D7,E9Q4X1,Q3U4X6 | |UniProt=Q3U3D7,E9Q4X1,Q3U4X6 | ||
|association_with_transcript=13bp_to_ENSMUST00000047595,ENSMUST00000052342,ENSMUST00000166371,NM_172681,uc008ppp.1,uc008ppq.1,uc008ppr.1,uc008pps.1,uc008ppu.1_5end | |||
|cluster_id=chr3:83844022..83844069,- | |||
|description=CAGE_peak_1_at_D930015E06Rik_5end | |||
|id=chr3:83844022..83844069,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.46e-10!29;UBERON:0005057!2.53e-10!51;UBERON:0001041!3.10e-10!92;UBERON:0000077!2.17e-09!97;UBERON:0000949!4.87e-09!72;UBERON:0003408!1.24e-08!24;UBERON:0002370!2.39e-08!23;UBERON:0000974!2.39e-08!23;UBERON:0004807!2.39e-08!23;UBERON:0005058!2.39e-08!23;UBERON:0003351!2.39e-08!23;UBERON:0009113!2.39e-08!23;UBERON:0003295!2.39e-08!23;UBERON:0009722!2.39e-08!23;UBERON:0005562!2.39e-08!23;UBERON:0007690!2.39e-08!23;UBERON:0006562!2.67e-08!24;UBERON:0001557!2.67e-08!24;UBERON:0001042!2.67e-08!24;UBERON:0008814!2.67e-08!24;UBERON:0009145!2.67e-08!24;UBERON:0003104!1.07e-07!131;UBERON:0009142!1.07e-07!131;UBERON:0002368!1.58e-07!60;UBERON:0002405!2.19e-07!70;UBERON:0002530!3.97e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.46e-10,29;UBERON:0005057,1.46e-10,29;UBERON:0000949,4.87e-09,72;UBERON:0003408,1.24e-08,24;UBERON:0001041,1.34e-08,80;UBERON:0000077,1.41e-08,35;UBERON:0002370,2.39e-08,23;UBERON:0000974,2.39e-08,23;UBERON:0004807,2.39e-08,23;UBERON:0005058,2.39e-08,23;UBERON:0003351,2.39e-08,23;UBERON:0009113,2.39e-08,23;UBERON:0003295,2.39e-08,23;UBERON:0009722,2.39e-08,23;UBERON:0005562,2.39e-08,23;UBERON:0007690,2.39e-08,23;UBERON:0006562,2.67e-08,24;UBERON:0001557,2.67e-08,24;UBERON:0001042,2.67e-08,24;UBERON:0008814,2.67e-08,24;UBERON:0009145,2.67e-08,24;UBERON:0000153,1.03e-07,43;UBERON:0002368,1.58e-07,60;UBERON:0002530,3.97e-07,65 | |||
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| ||
|short_description=p1@D930015E06Rik | |||
}} | }} |
Latest revision as of 18:26, 25 September 2015
Short description: | p1@D930015E06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D930015E06Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000047595, ENSMUST00000052342, ENSMUST00000166371, NM_172681, uc008ppp.1, uc008ppq.1, uc008ppr.1, uc008pps.1, uc008ppu.1_5end |
EntrezGene: | D930015E06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.46e-10 | 29 |
immune organ | 1.46e-10 | 29 |
endocrine system | 4.87e-09 | 72 |
gland of gut | 1.24e-08 | 24 |
foregut | 1.34e-08 | 80 |
mixed endoderm/mesoderm-derived structure | 1.41e-08 | 35 |
thymus | 2.39e-08 | 23 |
neck | 2.39e-08 | 23 |
respiratory system epithelium | 2.39e-08 | 23 |
hemolymphoid system gland | 2.39e-08 | 23 |
pharyngeal epithelium | 2.39e-08 | 23 |
thymic region | 2.39e-08 | 23 |
pharyngeal gland | 2.39e-08 | 23 |
entire pharyngeal arch endoderm | 2.39e-08 | 23 |
thymus primordium | 2.39e-08 | 23 |
early pharyngeal endoderm | 2.39e-08 | 23 |
pharynx | 2.67e-08 | 24 |
upper respiratory tract | 2.67e-08 | 24 |
chordate pharynx | 2.67e-08 | 24 |
pharyngeal arch system | 2.67e-08 | 24 |
pharyngeal region of foregut | 2.67e-08 | 24 |
anterior region of body | 1.03e-07 | 43 |
endocrine gland | 1.58e-07 | 60 |
gland | 3.97e-07 | 65 |