FFCP PHASE1:Mm9::chr19:4154640..4154668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19265 | |EntrezGene=19265 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1148 | |||
|TSSclassifier=NA | |||
|UniProt=Q542J3,Q64697 | |UniProt=Q542J3,Q64697 | ||
|association_with_transcript=0bp_to_NM_016933,uc008fza.1_5end | |association_with_transcript=0bp_to_NM_016933,uc008fza.1_5end | ||
|cluster_id=chr19:4154640..4154668,+ | |||
|description=CAGE_peak_1_at_Ptprcap_5end | |description=CAGE_peak_1_at_Ptprcap_5end | ||
|id=chr19:4154640..4154668,+ | |id=chr19:4154640..4154668,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.42e-09!12;CL:0000988!1.08e-08!32;CL:0002032!1.08e-08!32;CL:0000037!1.08e-08!32;CL:0000566!1.08e-08!32;CL:0000837!1.08e-08!32;CL:0000084!2.58e-08!11;CL:0000827!2.58e-08!11;CL:0000542!5.03e-08!13;CL:0000051!5.03e-08!13;CL:0000791!5.33e-07!9;CL:0000789!5.33e-07!9;CL:0002420!5.33e-07!9;CL:0002419!5.33e-07!9;CL:0000790!5.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.14e-10,32;CL:0002032,5.14e-10,32;CL:0000037,5.14e-10,32;CL:0000837,5.14e-10,32;CL:0000838,1.39e-09,12;CL:0000084,7.47e-09,11;CL:0000827,7.47e-09,11;CL:0000542,2.76e-08,13;CL:0000051,2.76e-08,13;CL:0002031,7.36e-08,25;CL:0000791,1.96e-07,9;CL:0000789,1.96e-07,9;CL:0002420,1.96e-07,9;CL:0002419,1.96e-07,9;CL:0000790,1.96e-07,9;CL:0000624,8.40e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.07e-14!70;UBERON:0002193!3.83e-13!48;UBERON:0005057!7.08e-12!51;UBERON:0004177!8.27e-12!29;UBERON:0002390!1.05e-11!45;UBERON:0003061!1.05e-11!45;UBERON:0004119!2.34e-10!130;UBERON:0000925!2.34e-10!130;UBERON:0006595!2.34e-10!130;UBERON:0001007!2.90e-10!128;UBERON:0001555!2.90e-10!128;UBERON:0007026!2.90e-10!128;UBERON:0000077!1.15e-09!97;UBERON:0001041!1.30e-09!92;UBERON:0003408!1.50e-09!24;UBERON:0004921!1.56e-09!126;UBERON:0004185!1.56e-09!126;UBERON:0002370!3.76e-09!23;UBERON:0000974!3.76e-09!23;UBERON:0004807!3.76e-09!23;UBERON:0005058!3.76e-09!23;UBERON:0003351!3.76e-09!23;UBERON:0009113!3.76e-09!23;UBERON:0003295!3.76e-09!23;UBERON:0009722!3.76e-09!23;UBERON:0005562!3.76e-09!23;UBERON:0007690!3.76e-09!23;UBERON:0006562!1.17e-08!24;UBERON:0001557!1.17e-08!24;UBERON:0001042!1.17e-08!24;UBERON:0008814!1.17e-08!24;UBERON:0009145!1.17e-08!24;UBERON:0000926!3.14e-07!193;UBERON:0004120!3.14e-07!193;UBERON:0006603!3.14e-07!193;UBERON:0003104!3.75e-07!131;UBERON:0009142!3.75e-07!131;UBERON:0003081!4.15e-07!88;UBERON:0002530!6.89e-07!65;UBERON:0001004!7.82e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.10e-14,48;UBERON:0002405,1.10e-14,48;UBERON:0004177,2.56e-13,29;UBERON:0005057,2.56e-13,29;UBERON:0002390,4.13e-13,45;UBERON:0003061,4.13e-13,45;UBERON:0000077,1.13e-11,35;UBERON:0003408,7.37e-11,24;UBERON:0002370,1.99e-10,23;UBERON:0000974,1.99e-10,23;UBERON:0004807,1.99e-10,23;UBERON:0005058,1.99e-10,23;UBERON:0003351,1.99e-10,23;UBERON:0009113,1.99e-10,23;UBERON:0003295,1.99e-10,23;UBERON:0009722,1.99e-10,23;UBERON:0005562,1.99e-10,23;UBERON:0007690,1.99e-10,23;UBERON:0006562,1.62e-09,24;UBERON:0001557,1.62e-09,24;UBERON:0001042,1.62e-09,24;UBERON:0008814,1.62e-09,24;UBERON:0009145,1.62e-09,24;UBERON:0001041,1.85e-09,80;UBERON:0001007,2.87e-09,116;UBERON:0001555,2.87e-09,116;UBERON:0007026,2.87e-09,116;UBERON:0004119,3.83e-09,118;UBERON:0000925,3.83e-09,118;UBERON:0006595,3.83e-09,118;UBERON:0004921,1.53e-08,114;UBERON:0001004,1.06e-07,42;UBERON:0002530,2.13e-07,65;UBERON:0000065,2.50e-07,41;UBERON:0000072,2.88e-07,27;UBERON:0005911,6.36e-07,69 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0,864.868020411678,115.305963442215,163.845168425395,376.679530096111,398.38216202271,614.268218993166,691.757644341526,93.9369528320169,127.96436899037,27.9824751251259,825.406755659829,702.574357795805,819.920807273794,11.3958008802433,431.220601065445,464.152025299888,75.8364084040748,92.6813495511367,1.72269589234506,0,0.215471232685889,9.88121781173144,18.6502296022349,11.7517170647311,4.44521471421742,1.23012957516914,0,0,0.664938581433969,0.204169356262369,23.8563029520037,9.37602413428561,17.7998072951091,29.4115744015507,23.9065919735456,25.24653835762,0,0,0,0,0,0,0,0,0,653.00990277671,307.55354821281,281.982697480527,0.257259436035947,0,0,0.202316460859598,0,0,0,0,1.7997994345628,0.988866362566974,0.7104801149461,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,6.6639050133202,0,1.44932244350839,3.44169550792555,0,0,0.649776417447669,0,24.0159958425296,0,0,0,0,0,0,0,0,0,0,22.836775943812,234.33878470069,7.57054909230606,4.8575891494518,1.82679286987285,1.84492397804847,1.3565037649736,1.52865319276416,0.376999773989026,0,7.08536848907567,71.6534547079398,8.08834249737046,46.8184019136034,44.1236480353052,1.86391761218122,0,0,15.0719662573069,232.680971790497,172.172083795108,144.987129090367,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,1.01839363850316,52.6241485680693,2.52722758433675,0.841767423545896,0.520481771850815,0.459804208866946,0,0.60281927134286,0.136072998302656,0.2562274405697,0.281105173679186,0.258703370739016,0,0.189106080167819,0.879755620819744,3.06874025398605,1.94633074457919,1.39300866608867,0.823128545631774,2.18937693500343,40.7283648641676,59.7047144506139,47.7394678984596,0,0.703578179943289,0.180062061461015,0.946978942340841,0.787056926989615,0.617068451549513,0.697601834251224,0.536546802799238,3.15266424391358,0.658239399653922,2.95501435342371,2.1888578577381,4.9707995724613,3.51280184465681,2.54992195644706,0.420579897128254,0.102904612379284,13.2167513193519,2.64450566663544,0.426576501070468,0.928946687441754,1.41754207454303,2.01683524623343,1.77902435075896,1.52180500890047,7.11793592316767,2.14108641141214,3.77002813200404,4.77495532898762,4.67913809085888,11.6846523125049,3.6743468478698,3.78368419183298,0.758671603812327,0.685491075658373,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,1.62371162777562,0.470996183524124,0.863780147452604,2.07516838961004,9.34332592010127,12.9728936774714,10.5685192820881,11.5630269191447,14.470629585145,26.9903402888305,30.4957905697859,31.1299635408068,15.3754391385326,5.75072826109418,18.2349064357567,13.1055822708115,2.77836765741823,1.61457672169721,2.41221760681684,42.3084805481525,1.51593129416388,0.488894929326078,0.509235257325564,0,6.86775655511445,1.6663054862021,1.17080188714679,6.62067605246002,6.2010113101657,9.56728611944923,21.7938208571932,27.8022820804092,16.0560455025478,0,0,17.2117495556663,14.0727740615414,0,0.35163505977661,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.42452482933804,1.79175655288934,2.96946221350564,6.63725691699814,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,3.99665692327106,3.87642439752332,0.363533729477506,4.63446591900138,12.3254335594968,2.10837217149998,4.12542172992747,0.680879211507576,0.36012218806262,0.388076051348264,0,0.177340233642274,0.178368817602071,0,0.304464949114599,5.63212099352905,0.847328283455281,1.54369878638473,2.63818004706368,2.09903754704677,1.5078231232039,1.55184047204077,2.46211349617592,7.28702091574627,1.66882771809459,118.926133035305,23.7344898157706,34.075793036027,56.5105371014073,120.427614622223,113.245195737229,351.345414797299,368.212271063544,327.39573794268,1.90934123603023,0.632671987162271,1.21991680276109,0.86404272657441,1.04544148007234,0.436725127492355,0.674321731924103,2.64491058321075,0.523511883968059,2.85152941241944,32.3096442805201,0,0.747582730219894,0.165458490457098,0.777804753376191,1.16243841129958,1.18269287843545,1.99507305697782,0.5208175393758,0.314578033277133,0,1.44015003128933,274.297652705259,105.417111950885,152.114927561109,209.042604171272,196.392285147227,277.557852629427,281.137156427207,264.511943169668,250.19486297151,240.280061383215,281.708361272332,302.899093339151,290.271126228874,300.023007900087,0.680191150845634,0,0,0,3.86379188064381,7.13193406714492,2.19781949120718,1.07184189539533,3.00943262421218,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,1.19707462020309,1.53660245178721,3.16038732188782,1.46729213839588,1.83843508450014,1.33348036680969,3.5025959730612,1.92551525755089,2.77966932940177,1.52087579934144,2.82939512079114,2.34103768674706,2.68905640100451,2.69946704091382,1.90517476513229,2.0859178670074,1.54327376370964,3.29668720642645,2.79677948255355,2.40008476669791,3.19456451086807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| |phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0,864.868020411678,115.305963442215,163.845168425395,376.679530096111,398.38216202271,614.268218993166,691.757644341526,93.9369528320169,127.96436899037,27.9824751251259,825.406755659829,702.574357795805,819.920807273794,11.3958008802433,431.220601065445,464.152025299888,75.8364084040748,92.6813495511367,1.72269589234506,0,0.215471232685889,9.88121781173144,18.6502296022349,11.7517170647311,4.44521471421742,1.23012957516914,0,0,0.664938581433969,0.204169356262369,23.8563029520037,9.37602413428561,17.7998072951091,29.4115744015507,23.9065919735456,25.24653835762,0,0,0,0,0,0,0,0,0,653.00990277671,307.55354821281,281.982697480527,0.257259436035947,0,0,0.202316460859598,0,0,0,0,1.7997994345628,0.988866362566974,0.7104801149461,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,6.6639050133202,0,1.44932244350839,3.44169550792555,0,0,0.649776417447669,0,24.0159958425296,0,0,0,0,0,0,0,0,0,0,22.836775943812,234.33878470069,7.57054909230606,4.8575891494518,1.82679286987285,1.84492397804847,1.3565037649736,1.52865319276416,0.376999773989026,0,7.08536848907567,71.6534547079398,8.08834249737046,46.8184019136034,44.1236480353052,1.86391761218122,0,0,15.0719662573069,232.680971790497,172.172083795108,144.987129090367,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,1.01839363850316,52.6241485680693,2.52722758433675,0.841767423545896,0.520481771850815,0.459804208866946,0,0.60281927134286,0.136072998302656,0.2562274405697,0.281105173679186,0.258703370739016,0,0.189106080167819,0.879755620819744,3.06874025398605,1.94633074457919,1.39300866608867,0.823128545631774,2.18937693500343,40.7283648641676,59.7047144506139,47.7394678984596,0,0.703578179943289,0.180062061461015,0.946978942340841,0.787056926989615,0.617068451549513,0.697601834251224,0.536546802799238,3.15266424391358,0.658239399653922,2.95501435342371,2.1888578577381,4.9707995724613,3.51280184465681,2.54992195644706,0.420579897128254,0.102904612379284,13.2167513193519,2.64450566663544,0.426576501070468,0.928946687441754,1.41754207454303,2.01683524623343,1.77902435075896,1.52180500890047,7.11793592316767,2.14108641141214,3.77002813200404,4.77495532898762,4.67913809085888,11.6846523125049,3.6743468478698,3.78368419183298,0.758671603812327,0.685491075658373,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,1.62371162777562,0.470996183524124,0.863780147452604,2.07516838961004,9.34332592010127,12.9728936774714,10.5685192820881,11.5630269191447,14.470629585145,26.9903402888305,30.4957905697859,31.1299635408068,15.3754391385326,5.75072826109418,18.2349064357567,13.1055822708115,2.77836765741823,1.61457672169721,2.41221760681684,42.3084805481525,1.51593129416388,0.488894929326078,0.509235257325564,0,6.86775655511445,1.6663054862021,1.17080188714679,6.62067605246002,6.2010113101657,9.56728611944923,21.7938208571932,27.8022820804092,16.0560455025478,0,0,17.2117495556663,14.0727740615414,0,0.35163505977661,0,3.7870639080656,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.42452482933804,1.79175655288934,2.96946221350564,6.63725691699814,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,3.99665692327106,3.87642439752332,0.363533729477506,4.63446591900138,12.3254335594968,2.10837217149998,4.12542172992747,0.680879211507576,0.36012218806262,0.388076051348264,0,0.177340233642274,0.178368817602071,0,0.304464949114599,5.63212099352905,0.847328283455281,1.54369878638473,2.63818004706368,2.09903754704677,1.5078231232039,1.55184047204077,2.46211349617592,7.28702091574627,1.66882771809459,118.926133035305,23.7344898157706,34.075793036027,56.5105371014073,120.427614622223,113.245195737229,351.345414797299,368.212271063544,327.39573794268,1.90934123603023,0.632671987162271,1.21991680276109,0.86404272657441,1.04544148007234,0.436725127492355,0.674321731924103,2.64491058321075,0.523511883968059,2.85152941241944,32.3096442805201,0,0.747582730219894,0.165458490457098,0.777804753376191,1.16243841129958,1.18269287843545,1.99507305697782,0.5208175393758,0.314578033277133,0,1.44015003128933,274.297652705259,105.417111950885,152.114927561109,209.042604171272,196.392285147227,277.557852629427,281.137156427207,264.511943169668,250.19486297151,240.280061383215,281.708361272332,302.899093339151,290.271126228874,300.023007900087,0.680191150845634,0,0,0,3.86379188064381,7.13193406714492,2.19781949120718,1.07184189539533,3.00943262421218,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,1.19707462020309,1.53660245178721,3.16038732188782,1.46729213839588,1.83843508450014,1.33348036680969,3.5025959730612,1.92551525755089,2.77966932940177,1.52087579934144,2.82939512079114,2.34103768674706,2.68905640100451,2.69946704091382,1.90517476513229,2.0859178670074,1.54327376370964,3.29668720642645,2.79677948255355,2.40008476669791,3.19456451086807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| ||
|short_description=p1@Ptprcap | |short_description=p1@Ptprcap | ||
}} | }} |
Latest revision as of 18:37, 25 September 2015
Short description: | p1@Ptprcap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptprcap_5end |
Coexpression cluster: | MCL_coexpression_mm9:1148 |
Association with transcript: | 0bp_to_NM_016933, uc008fza.1_5end |
EntrezGene: | Ptprcap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.14e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.14e-10 | 32 |
hematopoietic stem cell | 5.14e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.14e-10 | 32 |
lymphoid lineage restricted progenitor cell | 1.39e-09 | 12 |
T cell | 7.47e-09 | 11 |
pro-T cell | 7.47e-09 | 11 |
lymphocyte | 2.76e-08 | 13 |
common lymphoid progenitor | 2.76e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 7.36e-08 | 25 |
mature alpha-beta T cell | 1.96e-07 | 9 |
alpha-beta T cell | 1.96e-07 | 9 |
immature T cell | 1.96e-07 | 9 |
mature T cell | 1.96e-07 | 9 |
immature alpha-beta T cell | 1.96e-07 | 9 |
CD4-positive, alpha-beta T cell | 8.40e-07 | 8 |