FFCP PHASE1:Mm9::chr11:87881881..87881887,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:87881881..87881887,+
|short_description=p5@Vezf1
|description=CAGE_peak_5_at_Vezf1_5end
|association_with_transcript=38bp_to_NM_016686,uc007kvf.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22344 | |EntrezGene=22344 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q5SXC4,Q9Z162 | |UniProt=Q5SXC4,Q9Z162 | ||
|association_with_transcript=38bp_to_NM_016686,uc007kvf.1_5end | |||
|cluster_id=chr11:87881881..87881887,+ | |||
|description=CAGE_peak_5_at_Vezf1_5end | |||
|id=chr11:87881881..87881887,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.71e-10!33;CL:0000047!4.71e-10!33;CL:0000031!4.71e-10!33;CL:0000404!4.71e-10!33;CL:0000393!2.63e-09!39;CL:0000211!2.63e-09!39;CL:0002319!6.54e-08!43;CL:0000055!7.60e-08!50;CL:0000221!8.65e-08!44;CL:0000133!8.65e-08!44;CL:0000117!3.06e-07!23;CL:0000337!3.06e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.56e-14,33;CL:0000047,5.56e-14,33;CL:0000031,5.56e-14,33;CL:0000404,5.56e-14,33;CL:0000393,1.11e-12,39;CL:0000211,1.11e-12,39;CL:0002319,1.31e-09,43;CL:0000117,2.74e-09,23;CL:0000337,2.74e-09,23;CL:0000221,2.77e-09,44;CL:0000133,2.77e-09,44;CL:0002609,6.01e-08,6;CL:0002321,4.78e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.66e-07!73;UBERON:0005743!3.66e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.29e-08,95;UBERON:0000924,8.29e-08,95;UBERON:0006601,8.29e-08,95;UBERON:0003056,2.09e-07,49;UBERON:0001017,2.25e-07,73;UBERON:0002346,4.90e-07,64;UBERON:0003075,4.90e-07,64;UBERON:0007284,4.90e-07,64;UBERON:0001016,4.99e-07,75 | |||
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| ||
|short_description=p5@Vezf1 | |||
}} | }} |
Latest revision as of 22:32, 25 September 2015
Short description: | p5@Vezf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Vezf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_NM_016686, uc007kvf.1_5end |
EntrezGene: | Vezf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.56e-14 | 33 |
neuronal stem cell | 5.56e-14 | 33 |
neuroblast | 5.56e-14 | 33 |
electrically signaling cell | 5.56e-14 | 33 |
electrically responsive cell | 1.11e-12 | 39 |
electrically active cell | 1.11e-12 | 39 |
neural cell | 1.31e-09 | 43 |
CNS neuron (sensu Vertebrata) | 2.74e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.74e-09 | 23 |
ectodermal cell | 2.77e-09 | 44 |
neurectodermal cell | 2.77e-09 | 44 |
neuron of cerebral cortex | 6.01e-08 | 6 |
embryonic cell | 4.78e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.29e-08 | 95 |
ectoderm | 8.29e-08 | 95 |
presumptive ectoderm | 8.29e-08 | 95 |
pre-chordal neural plate | 2.09e-07 | 49 |
central nervous system | 2.25e-07 | 73 |
neurectoderm | 4.90e-07 | 64 |
neural plate | 4.90e-07 | 64 |
presumptive neural plate | 4.90e-07 | 64 |
nervous system | 4.99e-07 | 75 |