FFCP PHASE1:Mm9::chr17:23810865..23810954,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:23810865..23810954,+ to FFCP PHASE1:Mm9::chr17:23810865..23810954,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=353502 | |EntrezGene=353502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3079 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CYQ5 | |UniProt=Q9CYQ5 | ||
|association_with_transcript=290bp_to_ENSMUST00000024697,NM_181821,uc008asu.1_5end | |||
|cluster_id=chr17:23810865..23810954,+ | |||
|description=CAGE_peak_1_at_Hcfc1r1_5end | |||
|id=chr17:23810865..23810954,+ | |||
|ontology_enrichment_celltype=CL:0002453!7.84e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,7.84e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.74e-13!23;UBERON:0001009!4.74e-13!23;UBERON:0007100!5.95e-11!18;UBERON:0000948!5.95e-11!18;UBERON:0005498!5.95e-11!18;UBERON:0004140!5.95e-11!18;UBERON:0009881!5.95e-11!18;UBERON:0004141!5.95e-11!18;UBERON:0003084!5.95e-11!18;UBERON:0007005!5.95e-11!18;UBERON:0004139!5.95e-11!18;UBERON:0004291!5.95e-11!18;UBERON:0004111!1.08e-09!122;UBERON:0003103!3.19e-09!43;UBERON:0000025!6.73e-09!114;UBERON:0001017!5.66e-08!73;UBERON:0005743!5.66e-08!73;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75;UBERON:0001049!3.00e-07!52;UBERON:0005068!3.00e-07!52;UBERON:0006241!3.00e-07!52;UBERON:0007135!3.00e-07!52;UBERON:0000955!5.47e-07!50;UBERON:0006238!5.47e-07!50;UBERON:0004872!6.34e-07!33;UBERON:0002616!9.82e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.74e-13,23;UBERON:0001009,4.74e-13,23;UBERON:0007100,5.95e-11,18;UBERON:0000948,5.95e-11,18;UBERON:0005498,5.95e-11,18;UBERON:0004140,5.95e-11,18;UBERON:0009881,5.95e-11,18;UBERON:0004141,5.95e-11,18;UBERON:0003084,5.95e-11,18;UBERON:0007005,5.95e-11,18;UBERON:0004139,5.95e-11,18;UBERON:0004291,5.95e-11,18;UBERON:0010314,2.64e-10,92;UBERON:0004111,1.08e-09,122;UBERON:0003103,3.19e-09,43;UBERON:0000025,6.73e-09,114;UBERON:0001017,5.66e-08,73;UBERON:0000073,6.84e-08,54;UBERON:0001016,1.59e-07,75;UBERON:0001049,3.00e-07,52;UBERON:0005068,3.00e-07,52;UBERON:0006241,3.00e-07,52;UBERON:0007135,3.00e-07,52;UBERON:0004872,6.34e-07,33 | |||
|phase1_expression=143.813664700105,178.675408711353,189.279683586047,131.874396129778,131.735576975889,84.7790323155044,86.9039023015356,49.4542328781237,35.056391815765,20.1295492636914,6.33506482434368,4.14815226775749,51.8738211691553,31.9084468829341,43.9704885596675,42.9247566866431,34.9780939064073,76.0263818513353,74.1789085807047,70.024292546675,176.039610612714,61.461098793348,70.5239430675125,145.753097164793,116.998733344257,190.645012086187,186.08918234072,160.526068350987,243.800047162528,146.42950539052,137.029455584978,27.3063189587641,36.2888224674896,47.5445043046316,71.3463500785648,91.7615242378878,70.0300891979926,328.128798497736,290.656748162854,260.191300754978,339.997800081926,337.424469569472,315.096219117219,418.355126132843,402.871924666351,517.234747591619,1572.60660213956,901.315996476766,1497.16133533543,1160.5520675744,736.888523435908,894.140950350123,61.5762164231892,47.8739013727487,55.1193830593641,385.88915405392,478.510844697724,398.098855238185,196.04465057295,180.385923931763,211.065857367558,911.491791265965,937.316715101141,287.068009812766,402.468609564759,392.185023450247,709.752661818101,1076.579691511,107.733507188508,141.891241186607,147.437797907319,349.065502941448,345.659266589275,134.862369935664,100.54189909813,158.105631296924,303.919831558313,325.985774131484,343.617814894217,206.665812873214,189.013471682578,211.490828446045,349.81629774873,289.822744166315,301.470942863646,272.236812977669,272.784140411081,200.379404262198,91.8558725131522,162.93228359023,203.774735557279,164.340960503445,210.111142115695,211.563651122024,278.75408308505,276.880616226153,227.098627353043,549.808220636814,545.031037656819,581.59693964402,165.4910182376,281.034985537356,183.459772588785,248.873346103666,277.325023535365,281.482810542835,290.171031438486,192.628205086054,150.18397251536,253.984499939915,83.4464421745113,127.875500891099,132.603910922234,118.618718114914,154.276383762045,213.256205486459,308.00492979703,628.284205817016,106.153266233985,312.695320948342,190.144547394399,130.91631834651,223.670113461747,280.776784334074,203.791645729492,190.570963185609,43.9721506936727,42.5930939005319,49.3032481043491,333.733544593945,243.390320699509,173.026042859414,361.20693735955,204.316650406934,320.616952755401,240.279310603349,127.706562268297,178.648409796094,414.970769348094,272.943087084757,61.5469695213589,73.3387713142779,91.6516240709228,94.642625600829,86.6104634196404,91.8575374442373,95.2946538772442,225.589339284422,62.9458539363899,80.7482962316588,96.5971671660079,110.036257678643,126.511498397647,220.443621408531,219.981103820092,84.9876319314966,41.4305780514809,44.5211879308457,30.689657934724,514.914670523258,459.671077562949,405.139638287283,450.28848708307,406.908431253631,415.749869231484,378.332728108914,439.431831492576,378.553239954364,474.590607150478,444.729660190269,494.114394181991,439.7695621754,492.450908597827,420.871329232526,331.627248885629,219.083919755497,342.644277954199,199.660177830976,69.9585461755567,67.3486348395272,84.4081871659711,114.152874936812,159.445057436772,187.752692973096,159.9162937405,203.732606993601,150.801125280162,183.039954277859,159.675587350559,175.269784687573,200.143834183967,175.045179190589,96.3512936841655,73.6902906332751,94.6744979653876,106.102341807409,112.880347531558,108.500113370323,164.920888820063,212.706223238607,216.344246965414,212.366519109419,183.207723539858,63.7348303835479,42.0636249542254,44.2978361398162,63.0894977518244,49.6824949089979,59.5824493168522,71.348642087801,39.2367248795586,61.2271951409422,30.1913233707445,103.455183451844,138.544726862865,152.557642280055,166.839594575378,119.163549776752,228.354943045923,87.545032237964,85.0677177027375,93.869032433679,114.294150916501,160.638500886701,230.188200736775,131.324945008299,164.413455302757,153.032100547303,161.049316344062,173.531250283967,160.942403099015,167.50360983739,241.266054302836,339.941052386694,172.117495556663,210.539737430511,294.610332627598,250.481374247538,422.788224126446,333.261623909772,105.064237065613,115.960307056102,144.764523276441,113.27121022951,126.5496468788,133.045969470751,132.37309944769,164.540048004069,147.837628952,292.723719260266,233.349500082394,163.820355373875,125.585845661607,253.394108885814,246.905957312331,109.251286269742,98.2551560135441,140.510784418144,174.228116799656,131.274808172057,80.1127708821486,100.698843065269,144.024940867427,135.579769154465,150.748610262248,175.330423521918,218.221787288178,62.661260722896,124.572412482793,133.960646894745,136.729320138193,158.926616483445,151.549647974553,205.818305601469,222.234107536334,247.84352291067,224.938966016061,295.970824029957,206.028608463975,197.645454989567,175.716090372617,195.491811596368,167.018519388904,310.031104961572,71.936640815896,100.923178434016,77.5965069679092,58.7709585854636,57.9583525537147,48.9585290661958,78.1900777971734,87.7495606069336,79.1885849899348,914.574452058479,72.5991105268706,107.555998110103,133.602606596568,180.025022868458,231.682680134694,248.959583426379,253.41549525388,261.75594198403,259.359561556878,129.859916435167,94.1367207602598,87.9157290738595,83.5565376808343,113.948396369612,109.656690132594,119.958849098452,113.60180700909,83.3308063001281,77.4910555306003,71.2673156436718,93.6097520338063,79.0027801570446,75.6165053032312,83.6067191321694,63.401361613164,64.0915570489584,75.3002334620994,45.3136844690283,54.9405041089427,56.3392790710664,51.0585604588499,59.5882754158727,65.7840694993329,51.6657589608569,60.0747277213264,317.195806677681,81.6908308416558,68.9002418760773,129.103269983976,392.174875885347,376.678728230522,230.587894952487,331.627882435315,201.130413718181,314.566776337706,317.624413189952,330.560711254532,481.360763744669,265.812017671009,256.078531215108,257.183572588318,312.973236240833,339.403664329169,301.854261751311,70.3678216620718,90.179621388633,84.1716676367881,139.543255597201,127.025576552557,176.305924603564,199.133068110247,202.120391151355,190.626010497538,212.518355093354,231.933559399569,210.506996986861,224.458693405308,196.173066968519,202.460028068537,225.286915976894,171.045265094607,167.63811258296,189.147428468718,179.43548364383,214.293282740885,202.499894827804,176.681216750965,198.252512286496,165.350181389736,177.182988925171,159.69612031793,195.197725886879,191.755408750357,214.917490044914,186.375613473078,173.564897945743,167.375496656403,200.953083018198,203.902287807066,255.056600074643,207.029473474186,238.936612101708,375.116419187002,346.328528017639,373.307215348879 | |phase1_expression=143.813664700105,178.675408711353,189.279683586047,131.874396129778,131.735576975889,84.7790323155044,86.9039023015356,49.4542328781237,35.056391815765,20.1295492636914,6.33506482434368,4.14815226775749,51.8738211691553,31.9084468829341,43.9704885596675,42.9247566866431,34.9780939064073,76.0263818513353,74.1789085807047,70.024292546675,176.039610612714,61.461098793348,70.5239430675125,145.753097164793,116.998733344257,190.645012086187,186.08918234072,160.526068350987,243.800047162528,146.42950539052,137.029455584978,27.3063189587641,36.2888224674896,47.5445043046316,71.3463500785648,91.7615242378878,70.0300891979926,328.128798497736,290.656748162854,260.191300754978,339.997800081926,337.424469569472,315.096219117219,418.355126132843,402.871924666351,517.234747591619,1572.60660213956,901.315996476766,1497.16133533543,1160.5520675744,736.888523435908,894.140950350123,61.5762164231892,47.8739013727487,55.1193830593641,385.88915405392,478.510844697724,398.098855238185,196.04465057295,180.385923931763,211.065857367558,911.491791265965,937.316715101141,287.068009812766,402.468609564759,392.185023450247,709.752661818101,1076.579691511,107.733507188508,141.891241186607,147.437797907319,349.065502941448,345.659266589275,134.862369935664,100.54189909813,158.105631296924,303.919831558313,325.985774131484,343.617814894217,206.665812873214,189.013471682578,211.490828446045,349.81629774873,289.822744166315,301.470942863646,272.236812977669,272.784140411081,200.379404262198,91.8558725131522,162.93228359023,203.774735557279,164.340960503445,210.111142115695,211.563651122024,278.75408308505,276.880616226153,227.098627353043,549.808220636814,545.031037656819,581.59693964402,165.4910182376,281.034985537356,183.459772588785,248.873346103666,277.325023535365,281.482810542835,290.171031438486,192.628205086054,150.18397251536,253.984499939915,83.4464421745113,127.875500891099,132.603910922234,118.618718114914,154.276383762045,213.256205486459,308.00492979703,628.284205817016,106.153266233985,312.695320948342,190.144547394399,130.91631834651,223.670113461747,280.776784334074,203.791645729492,190.570963185609,43.9721506936727,42.5930939005319,49.3032481043491,333.733544593945,243.390320699509,173.026042859414,361.20693735955,204.316650406934,320.616952755401,240.279310603349,127.706562268297,178.648409796094,414.970769348094,272.943087084757,61.5469695213589,73.3387713142779,91.6516240709228,94.642625600829,86.6104634196404,91.8575374442373,95.2946538772442,225.589339284422,62.9458539363899,80.7482962316588,96.5971671660079,110.036257678643,126.511498397647,220.443621408531,219.981103820092,84.9876319314966,41.4305780514809,44.5211879308457,30.689657934724,514.914670523258,459.671077562949,405.139638287283,450.28848708307,406.908431253631,415.749869231484,378.332728108914,439.431831492576,378.553239954364,474.590607150478,444.729660190269,494.114394181991,439.7695621754,492.450908597827,420.871329232526,331.627248885629,219.083919755497,342.644277954199,199.660177830976,69.9585461755567,67.3486348395272,84.4081871659711,114.152874936812,159.445057436772,187.752692973096,159.9162937405,203.732606993601,150.801125280162,183.039954277859,159.675587350559,175.269784687573,200.143834183967,175.045179190589,96.3512936841655,73.6902906332751,94.6744979653876,106.102341807409,112.880347531558,108.500113370323,164.920888820063,212.706223238607,216.344246965414,212.366519109419,183.207723539858,63.7348303835479,42.0636249542254,44.2978361398162,63.0894977518244,49.6824949089979,59.5824493168522,71.348642087801,39.2367248795586,61.2271951409422,30.1913233707445,103.455183451844,138.544726862865,152.557642280055,166.839594575378,119.163549776752,228.354943045923,87.545032237964,85.0677177027375,93.869032433679,114.294150916501,160.638500886701,230.188200736775,131.324945008299,164.413455302757,153.032100547303,161.049316344062,173.531250283967,160.942403099015,167.50360983739,241.266054302836,339.941052386694,172.117495556663,210.539737430511,294.610332627598,250.481374247538,422.788224126446,333.261623909772,105.064237065613,115.960307056102,144.764523276441,113.27121022951,126.5496468788,133.045969470751,132.37309944769,164.540048004069,147.837628952,292.723719260266,233.349500082394,163.820355373875,125.585845661607,253.394108885814,246.905957312331,109.251286269742,98.2551560135441,140.510784418144,174.228116799656,131.274808172057,80.1127708821486,100.698843065269,144.024940867427,135.579769154465,150.748610262248,175.330423521918,218.221787288178,62.661260722896,124.572412482793,133.960646894745,136.729320138193,158.926616483445,151.549647974553,205.818305601469,222.234107536334,247.84352291067,224.938966016061,295.970824029957,206.028608463975,197.645454989567,175.716090372617,195.491811596368,167.018519388904,310.031104961572,71.936640815896,100.923178434016,77.5965069679092,58.7709585854636,57.9583525537147,48.9585290661958,78.1900777971734,87.7495606069336,79.1885849899348,914.574452058479,72.5991105268706,107.555998110103,133.602606596568,180.025022868458,231.682680134694,248.959583426379,253.41549525388,261.75594198403,259.359561556878,129.859916435167,94.1367207602598,87.9157290738595,83.5565376808343,113.948396369612,109.656690132594,119.958849098452,113.60180700909,83.3308063001281,77.4910555306003,71.2673156436718,93.6097520338063,79.0027801570446,75.6165053032312,83.6067191321694,63.401361613164,64.0915570489584,75.3002334620994,45.3136844690283,54.9405041089427,56.3392790710664,51.0585604588499,59.5882754158727,65.7840694993329,51.6657589608569,60.0747277213264,317.195806677681,81.6908308416558,68.9002418760773,129.103269983976,392.174875885347,376.678728230522,230.587894952487,331.627882435315,201.130413718181,314.566776337706,317.624413189952,330.560711254532,481.360763744669,265.812017671009,256.078531215108,257.183572588318,312.973236240833,339.403664329169,301.854261751311,70.3678216620718,90.179621388633,84.1716676367881,139.543255597201,127.025576552557,176.305924603564,199.133068110247,202.120391151355,190.626010497538,212.518355093354,231.933559399569,210.506996986861,224.458693405308,196.173066968519,202.460028068537,225.286915976894,171.045265094607,167.63811258296,189.147428468718,179.43548364383,214.293282740885,202.499894827804,176.681216750965,198.252512286496,165.350181389736,177.182988925171,159.69612031793,195.197725886879,191.755408750357,214.917490044914,186.375613473078,173.564897945743,167.375496656403,200.953083018198,203.902287807066,255.056600074643,207.029473474186,238.936612101708,375.116419187002,346.328528017639,373.307215348879 | ||
|short_description=p1@Hcfc1r1 | |||
}} | }} |
Latest revision as of 00:54, 26 September 2015
Short description: | p1@Hcfc1r1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hcfc1r1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3079 |
Association with transcript: | 290bp_to_ENSMUST00000024697, NM_181821, uc008asu.1_5end |
EntrezGene: | Hcfc1r1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 7.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.74e-13 | 23 |
circulatory system | 4.74e-13 | 23 |
primary circulatory organ | 5.95e-11 | 18 |
heart | 5.95e-11 | 18 |
primitive heart tube | 5.95e-11 | 18 |
primary heart field | 5.95e-11 | 18 |
anterior lateral plate mesoderm | 5.95e-11 | 18 |
heart tube | 5.95e-11 | 18 |
heart primordium | 5.95e-11 | 18 |
cardiac mesoderm | 5.95e-11 | 18 |
cardiogenic plate | 5.95e-11 | 18 |
heart rudiment | 5.95e-11 | 18 |
structure with developmental contribution from neural crest | 2.64e-10 | 92 |
anatomical conduit | 1.08e-09 | 122 |
compound organ | 3.19e-09 | 43 |
tube | 6.73e-09 | 114 |
central nervous system | 5.66e-08 | 73 |
regional part of nervous system | 6.84e-08 | 54 |
nervous system | 1.59e-07 | 75 |
neural tube | 3.00e-07 | 52 |
neural rod | 3.00e-07 | 52 |
future spinal cord | 3.00e-07 | 52 |
neural keel | 3.00e-07 | 52 |
splanchnic layer of lateral plate mesoderm | 6.34e-07 | 33 |