FFCP PHASE1:Mm9::chr10:61842649..61842665,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:61842649..61842665,- to FFCP PHASE1:Mm9::chr10:61842649..61842665,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15275 | |EntrezGene=15275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P17710,B4YB29,Q3TTB4,Q6GQU1 | |UniProt=P17710,B4YB29,Q3TTB4,Q6GQU1 | ||
|association_with_transcript=0bp_to_ENSMUST00000116238,NM_010438,uc007fgz.2,uc011xez.1,uc011xfa.1,uc011xfb.1_5end | |||
|cluster_id=chr10:61842649..61842665,- | |||
|description=CAGE_peak_3_at_Hk1_5end | |||
|id=chr10:61842649..61842665,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.09e-18!15;UBERON:0003101!2.82e-17!16;UBERON:0000079!2.82e-17!16;UBERON:0001301!3.36e-15!3;UBERON:0006555!3.36e-15!3;UBERON:0005103!3.36e-15!3;UBERON:0000083!3.36e-15!3;UBERON:0009201!3.36e-15!3;UBERON:0004819!3.36e-15!3;UBERON:0006553!3.36e-15!3;UBERON:0003074!3.36e-15!3;UBERON:0003060!3.36e-15!3;UBERON:0000473!6.02e-13!14;UBERON:0000080!1.18e-11!4;UBERON:0005904!1.18e-11!4;UBERON:0006947!1.18e-11!4;UBERON:0002120!1.18e-11!4;UBERON:0004054!1.18e-11!4;UBERON:0004875!1.18e-11!4;UBERON:0004876!1.18e-11!4;UBERON:0005721!1.18e-11!4;UBERON:0005754!1.18e-11!4;UBERON:0007297!1.18e-11!4;UBERON:0003133!1.31e-11!24;UBERON:0004176!9.70e-11!17;UBERON:0009196!9.70e-11!17;UBERON:0009117!9.70e-11!17;UBERON:0005156!9.82e-11!26;UBERON:0000990!9.82e-11!26;UBERON:0000991!3.64e-10!18;UBERON:0005564!3.64e-10!18;UBERON:0000058!4.37e-08!6;UBERON:0003886!2.13e-07!38;UBERON:0002553!3.27e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.09e-18,15;UBERON:0003101,2.82e-17,16;UBERON:0000079,2.82e-17,16;UBERON:0001301,3.36e-15,3;UBERON:0006555,3.36e-15,3;UBERON:0005103,3.36e-15,3;UBERON:0000083,3.36e-15,3;UBERON:0009201,3.36e-15,3;UBERON:0004819,3.36e-15,3;UBERON:0006553,3.36e-15,3;UBERON:0003074,3.36e-15,3;UBERON:0003060,3.36e-15,3;UBERON:0000473,6.02e-13,14;UBERON:0000080,1.18e-11,4;UBERON:0005904,1.18e-11,4;UBERON:0006947,1.18e-11,4;UBERON:0002120,1.18e-11,4;UBERON:0004054,1.18e-11,4;UBERON:0004875,1.18e-11,4;UBERON:0004876,1.18e-11,4;UBERON:0005721,1.18e-11,4;UBERON:0005754,1.18e-11,4;UBERON:0007297,1.18e-11,4;UBERON:0003133,1.31e-11,24;UBERON:0004176,9.70e-11,17;UBERON:0009196,9.70e-11,17;UBERON:0009117,9.70e-11,17;UBERON:0005156,9.82e-11,26;UBERON:0000990,9.82e-11,26;UBERON:0000991,3.64e-10,18;UBERON:0005564,3.64e-10,18;UBERON:0003886,2.13e-07,38;UBERON:0002553,3.27e-07,39;UBERON:0000058,4.66e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,224.514285998824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7519960613438,0,0,0,0,0,0,0,0,0,0,28.545969929765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,19.9650979162603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1601.45163880178,0,0,0,0,0,0,0,0,10.8712854371703,433.19712941183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,224.514285998824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7519960613438,0,0,0,0,0,0,0,0,0,0,28.545969929765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,19.9650979162603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1601.45163880178,0,0,0,0,0,0,0,0,10.8712854371703,433.19712941183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Hk1 | |||
}} | }} |
Latest revision as of 04:21, 26 September 2015
Short description: | p3@Hk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000116238, NM_010438, uc007fgz.2, uc011xez.1, uc011xfa.1, uc011xfb.1_5end |
EntrezGene: | Hk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.09e-18 | 15 |
male organism | 2.82e-17 | 16 |
male reproductive system | 2.82e-17 | 16 |
epididymis | 3.36e-15 | 3 |
excretory tube | 3.36e-15 | 3 |
mesonephric epithelium | 3.36e-15 | 3 |
mesonephric tubule | 3.36e-15 | 3 |
nephric duct | 3.36e-15 | 3 |
kidney epithelium | 3.36e-15 | 3 |
renal duct | 3.36e-15 | 3 |
mesonephric duct | 3.36e-15 | 3 |
pronephric duct | 3.36e-15 | 3 |
testis | 6.02e-13 | 14 |
mesonephros | 1.18e-11 | 4 |
duct of male reproductive system | 1.18e-11 | 4 |
male genital duct | 1.18e-11 | 4 |
pronephros | 1.18e-11 | 4 |
internal male genitalia | 1.18e-11 | 4 |
nephrogenic cord | 1.18e-11 | 4 |
urogenital ridge | 1.18e-11 | 4 |
pronephric mesoderm | 1.18e-11 | 4 |
rostral part of nephrogenic cord | 1.18e-11 | 4 |
presumptive pronephric mesoderm | 1.18e-11 | 4 |
reproductive organ | 1.31e-11 | 24 |
external genitalia | 9.70e-11 | 17 |
indifferent external genitalia | 9.70e-11 | 17 |
indifferent gonad | 9.70e-11 | 17 |
reproductive structure | 9.82e-11 | 26 |
reproductive system | 9.82e-11 | 26 |
gonad | 3.64e-10 | 18 |
gonad primordium | 3.64e-10 | 18 |
body cavity precursor | 2.13e-07 | 38 |
anatomical cavity | 3.27e-07 | 39 |
duct | 4.66e-07 | 7 |