FFCP PHASE2:Mm9::chr9:108957395..108957415,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:66940 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q9D7I0 |association_with_transcript=-9bp_to_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=66940 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q9D7I0 | ||
|association_with_transcript=-9bp_to_NM_026381,uc009rrq.1_5end | |association_with_transcript=-9bp_to_NM_026381,uc009rrq.1_5end | ||
|cluster_id=chr9:108957395..108957415,+ | |cluster_id=chr9:108957395..108957415,+ | ||
Latest revision as of 04:50, 26 September 2015
| Short description: | p9@Shisa5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Shisa5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -9bp_to_NM_026381, uc009rrq.1_5end |
| EntrezGene: | Shisa5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p9@Shisa5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.35e-11 | 23 |
| neuroblast (sensu Vertebrata) | 2.35e-11 | 23 |
| neural cell | 1.17e-08 | 43 |
| ectodermal cell | 2.76e-08 | 44 |
| neurectodermal cell | 2.76e-08 | 44 |
| embryonic cell | 7.78e-07 | 70 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 8.78e-27 | 54 |
| neural tube | 1.11e-24 | 52 |
| neural rod | 1.11e-24 | 52 |
| future spinal cord | 1.11e-24 | 52 |
| neural keel | 1.11e-24 | 52 |
| nervous system | 6.59e-24 | 75 |
| central nervous system | 8.76e-24 | 73 |
| brain | 2.56e-21 | 47 |
| future brain | 2.56e-21 | 47 |
| gray matter | 3.86e-21 | 34 |
Showing 1 to 10 of 45 entries
