FFCP PHASE1:Mm9::chr10:6373295..6373325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270685 | |EntrezGene=270685 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V3R1 | |UniProt=Q3V3R1 | ||
|association_with_transcript=71bp_to_ENSMUST00000043735_5end | |association_with_transcript=71bp_to_ENSMUST00000043735_5end | ||
|cluster_id=chr10:6373295..6373325,- | |||
|description=CAGE_peak_2_at_Mthfd1l_5end | |description=CAGE_peak_2_at_Mthfd1l_5end | ||
|id=chr10:6373295..6373325,- | |id=chr10:6373295..6373325,- | ||
|ontology_enrichment_celltype=CL:0000988!1.75e-10!32;CL:0002032!1.75e-10!32;CL:0000037!1.75e-10!32;CL:0000566!1.75e-10!32;CL:0000837!1.75e-10!32;CL:0000542!5.30e-08!13;CL:0000051!5.30e-08!13;CL:0000838!9.83e-08!12;CL:0000034!2.24e-07!97;CL:0000084!2.29e-07!11;CL:0000827!2.29e-07!11;CL:0002031!5.06e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-10,32;CL:0002032,1.37e-10,32;CL:0000037,1.37e-10,32;CL:0000837,1.37e-10,32;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000838,7.70e-08,12;CL:0000034,1.26e-07,97;CL:0000084,1.82e-07,11;CL:0000827,1.82e-07,11;CL:0002031,4.48e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.10e-10!23;UBERON:0000974!7.10e-10!23;UBERON:0004807!7.10e-10!23;UBERON:0005058!7.10e-10!23;UBERON:0003351!7.10e-10!23;UBERON:0009113!7.10e-10!23;UBERON:0003295!7.10e-10!23;UBERON:0009722!7.10e-10!23;UBERON:0005562!7.10e-10!23;UBERON:0007690!7.10e-10!23;UBERON:0004177!1.27e-09!29;UBERON:0003408!3.16e-09!24;UBERON:0006562!7.57e-09!24;UBERON:0001557!7.57e-09!24;UBERON:0001042!7.57e-09!24;UBERON:0008814!7.57e-09!24;UBERON:0009145!7.57e-09!24;UBERON:0002390!7.21e-08!45;UBERON:0003061!7.21e-08!45;UBERON:0000072!1.60e-07!27;UBERON:0002193!4.60e-07!48;UBERON:0007811!7.57e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.24e-10,36;UBERON:0002370,5.12e-10,23;UBERON:0000974,5.12e-10,23;UBERON:0004807,5.12e-10,23;UBERON:0005058,5.12e-10,23;UBERON:0003351,5.12e-10,23;UBERON:0009113,5.12e-10,23;UBERON:0003295,5.12e-10,23;UBERON:0009722,5.12e-10,23;UBERON:0005562,5.12e-10,23;UBERON:0007690,5.12e-10,23;UBERON:0004177,9.23e-10,29;UBERON:0005057,9.23e-10,29;UBERON:0003408,2.33e-09,24;UBERON:0006562,5.55e-09,24;UBERON:0001557,5.55e-09,24;UBERON:0001042,5.55e-09,24;UBERON:0008814,5.55e-09,24;UBERON:0009145,5.55e-09,24;UBERON:0000153,1.54e-08,43;UBERON:0002390,7.70e-08,45;UBERON:0003061,7.70e-08,45;UBERON:0000072,1.24e-07,27;UBERON:0000077,3.00e-07,35;UBERON:0002193,4.93e-07,48;UBERON:0002405,4.93e-07,48 | |||
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| ||
|short_description=p2@Mthfd1l | |short_description=p2@Mthfd1l | ||
}} | }} |
Latest revision as of 05:03, 26 September 2015
Short description: | p2@Mthfd1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mthfd1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 71bp_to_ENSMUST00000043735_5end |
EntrezGene: | Mthfd1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.37e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.37e-10 | 32 |
hematopoietic stem cell | 1.37e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.37e-10 | 32 |
lymphocyte | 4.11e-08 | 13 |
common lymphoid progenitor | 4.11e-08 | 13 |
lymphoid lineage restricted progenitor cell | 7.70e-08 | 12 |
stem cell | 1.26e-07 | 97 |
T cell | 1.82e-07 | 11 |
pro-T cell | 1.82e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 4.48e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 2.24e-10 | 36 |
thymus | 5.12e-10 | 23 |
neck | 5.12e-10 | 23 |
respiratory system epithelium | 5.12e-10 | 23 |
hemolymphoid system gland | 5.12e-10 | 23 |
pharyngeal epithelium | 5.12e-10 | 23 |
thymic region | 5.12e-10 | 23 |
pharyngeal gland | 5.12e-10 | 23 |
entire pharyngeal arch endoderm | 5.12e-10 | 23 |
thymus primordium | 5.12e-10 | 23 |
early pharyngeal endoderm | 5.12e-10 | 23 |
hemopoietic organ | 9.23e-10 | 29 |
immune organ | 9.23e-10 | 29 |
gland of gut | 2.33e-09 | 24 |
pharynx | 5.55e-09 | 24 |
upper respiratory tract | 5.55e-09 | 24 |
chordate pharynx | 5.55e-09 | 24 |
pharyngeal arch system | 5.55e-09 | 24 |
pharyngeal region of foregut | 5.55e-09 | 24 |
anterior region of body | 1.54e-08 | 43 |
hematopoietic system | 7.70e-08 | 45 |
blood island | 7.70e-08 | 45 |
segment of respiratory tract | 1.24e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 3.00e-07 | 35 |
hemolymphoid system | 4.93e-07 | 48 |
immune system | 4.93e-07 | 48 |