FFCP PHASE2:Mm9::chr4:116550032..116550058,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:74464 |HGNC= |MCL_coexpression_id=295 |TSSclassifier=NA |UniProt=uniprot:A2AGE6,uniprot:Q80TC6 |association_with_tr...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=74464 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |MCL_coexpression_id=295 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=A2AGE6,Q80TC6 | ||
|association_with_transcript=25bp_to_NM_001029912,uc008uhq.1_5end | |association_with_transcript=25bp_to_NM_001029912,uc008uhq.1_5end | ||
|cluster_id=chr4:116550032..116550058,+ | |cluster_id=chr4:116550032..116550058,+ | ||
Latest revision as of 05:25, 26 September 2015
| Short description: | p1@Zswim5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Zswim5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:295 |
| Association with transcript: | 25bp_to_NM_001029912, uc008uhq.1_5end |
| EntrezGene: | Zswim5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Zswim5 |
|---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 3.10e-15 | 33 |
| neuronal stem cell | 3.10e-15 | 33 |
| neuroblast | 3.10e-15 | 33 |
| electrically signaling cell | 3.10e-15 | 33 |
| CNS neuron (sensu Vertebrata) | 1.78e-13 | 23 |
| neuroblast (sensu Vertebrata) | 1.78e-13 | 23 |
| electrically responsive cell | 6.62e-11 | 39 |
| electrically active cell | 6.62e-11 | 39 |
| ectodermal cell | 2.92e-09 | 44 |
| neurectodermal cell | 2.92e-09 | 44 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 2.93e-23 | 64 |
| neural plate | 2.93e-23 | 64 |
| presumptive neural plate | 2.93e-23 | 64 |
| central nervous system | 2.59e-21 | 73 |
| ectoderm-derived structure | 1.21e-20 | 95 |
| ectoderm | 1.21e-20 | 95 |
| presumptive ectoderm | 1.21e-20 | 95 |
| nervous system | 4.40e-20 | 75 |
| ecto-epithelium | 8.77e-20 | 73 |
| pre-chordal neural plate | 1.10e-19 | 49 |
Showing 1 to 10 of 27 entries
