FFCP PHASE1:Mm9::chr9:15110696..15110712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75316 | |EntrezGene=75316 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4V4 | |UniProt=Q9D4V4 | ||
|association_with_transcript=0bp_to_ENSMUST00000171167_5end | |association_with_transcript=0bp_to_ENSMUST00000171167_5end | ||
|cluster_id=chr9:15110696..15110712,+ | |||
|description=CAGE_peak_1_at_Taf1d_5end | |description=CAGE_peak_1_at_Taf1d_5end | ||
|id=chr9:15110696..15110712,+ | |id=chr9:15110696..15110712,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.68e-10!32;CL:0002032!1.68e-10!32;CL:0000037!1.68e-10!32;CL:0000566!1.68e-10!32;CL:0000837!1.68e-10!32;CL:0000542!4.10e-09!13;CL:0000051!4.10e-09!13;CL:0000838!5.73e-09!12;CL:0000084!2.68e-08!11;CL:0000827!2.68e-08!11;CL:0002031!9.43e-08!25;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0000624!9.33e-07!8 | |ontology_enrichment_celltype=CL:0000988!1.68e-10!32;CL:0002032!1.68e-10!32;CL:0000037!1.68e-10!32;CL:0000566!1.68e-10!32;CL:0000837!1.68e-10!32;CL:0000542!4.10e-09!13;CL:0000051!4.10e-09!13;CL:0000838!5.73e-09!12;CL:0000084!2.68e-08!11;CL:0000827!2.68e-08!11;CL:0002031!9.43e-08!25;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0000624!9.33e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.68e-10,32;CL:0002032,1.68e-10,32;CL:0000037,1.68e-10,32;CL:0000837,1.68e-10,32;CL:0000542,4.10e-09,13;CL:0000051,4.10e-09,13;CL:0000838,5.73e-09,12;CL:0000084,2.68e-08,11;CL:0000827,2.68e-08,11;CL:0002031,9.43e-08,25;CL:0000791,1.95e-07,9;CL:0000789,1.95e-07,9;CL:0002420,1.95e-07,9;CL:0002419,1.95e-07,9;CL:0000790,1.95e-07,9;CL:0000624,9.33e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!2.05e-07!27;UBERON:0003408!2.17e-07!24;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0006562!6.80e-07!24;UBERON:0001557!6.80e-07!24;UBERON:0001042!6.80e-07!24;UBERON:0008814!6.80e-07!24;UBERON:0009145!6.80e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,2.05e-07,27;UBERON:0003408,2.17e-07,24;UBERON:0002370,2.62e-07,23;UBERON:0000974,2.62e-07,23;UBERON:0004807,2.62e-07,23;UBERON:0005058,2.62e-07,23;UBERON:0003351,2.62e-07,23;UBERON:0009113,2.62e-07,23;UBERON:0003295,2.62e-07,23;UBERON:0009722,2.62e-07,23;UBERON:0005562,2.62e-07,23;UBERON:0007690,2.62e-07,23;UBERON:0006562,6.80e-07,24;UBERON:0001557,6.80e-07,24;UBERON:0001042,6.80e-07,24;UBERON:0008814,6.80e-07,24;UBERON:0009145,6.80e-07,24 | |||
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| ||
|short_description=p1@Taf1d | |short_description=p1@Taf1d | ||
}} | }} |
Latest revision as of 10:20, 26 September 2015
Short description: | p1@Taf1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Taf1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000171167_5end |
EntrezGene: | Taf1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.68e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.68e-10 | 32 |
hematopoietic stem cell | 1.68e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.68e-10 | 32 |
lymphocyte | 4.10e-09 | 13 |
common lymphoid progenitor | 4.10e-09 | 13 |
lymphoid lineage restricted progenitor cell | 5.73e-09 | 12 |
T cell | 2.68e-08 | 11 |
pro-T cell | 2.68e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 9.43e-08 | 25 |
mature alpha-beta T cell | 1.95e-07 | 9 |
alpha-beta T cell | 1.95e-07 | 9 |
immature T cell | 1.95e-07 | 9 |
mature T cell | 1.95e-07 | 9 |
immature alpha-beta T cell | 1.95e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 2.05e-07 | 27 |
gland of gut | 2.17e-07 | 24 |
thymus | 2.62e-07 | 23 |
neck | 2.62e-07 | 23 |
respiratory system epithelium | 2.62e-07 | 23 |
hemolymphoid system gland | 2.62e-07 | 23 |
pharyngeal epithelium | 2.62e-07 | 23 |
thymic region | 2.62e-07 | 23 |
pharyngeal gland | 2.62e-07 | 23 |
entire pharyngeal arch endoderm | 2.62e-07 | 23 |
thymus primordium | 2.62e-07 | 23 |
early pharyngeal endoderm | 2.62e-07 | 23 |
pharynx | 6.80e-07 | 24 |
upper respiratory tract | 6.80e-07 | 24 |
chordate pharynx | 6.80e-07 | 24 |
pharyngeal arch system | 6.80e-07 | 24 |
pharyngeal region of foregut | 6.80e-07 | 24 |