FFCP PHASE1:Mm9::chr2:25702816..25702827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227631 | |EntrezGene=227631 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=592 | |MCL_coexpression_id=592 | ||
|TSSclassifier=NA | |||
|UniProt=Q6IUP1 | |UniProt=Q6IUP1 | ||
|association_with_transcript=-48bp_to_ENSMUST00000076989,NM_001001714,uc008itn.1_5end | |association_with_transcript=-48bp_to_ENSMUST00000076989,NM_001001714,uc008itn.1_5end | ||
|cluster_id=chr2:25702816..25702827,- | |||
|description=CAGE_peak_2_at_Sohlh1_5end | |description=CAGE_peak_2_at_Sohlh1_5end | ||
|id=chr2:25702816..25702827,- | |id=chr2:25702816..25702827,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!2.18e-37!17;UBERON:0009196!2.18e-37!17;UBERON:0009117!2.18e-37!17;UBERON:0000991!3.28e-35!18;UBERON:0005564!3.28e-35!18;UBERON:0003133!6.05e-26!24;UBERON:0000473!1.28e-25!14;UBERON:0003135!7.88e-24!15;UBERON:0005156!8.36e-24!26;UBERON:0000990!8.36e-24!26;UBERON:0003101!2.90e-22!16;UBERON:0000079!2.90e-22!16;UBERON:0002323!3.72e-16!37;UBERON:0004458!3.72e-16!37;UBERON:0003886!1.11e-15!38;UBERON:0002553!3.16e-15!39;UBERON:0000992!1.60e-14!3;UBERON:0000464!8.58e-10!57 | |ontology_enrichment_uberon=UBERON:0004176!2.18e-37!17;UBERON:0009196!2.18e-37!17;UBERON:0009117!2.18e-37!17;UBERON:0000991!3.28e-35!18;UBERON:0005564!3.28e-35!18;UBERON:0003133!6.05e-26!24;UBERON:0000473!1.28e-25!14;UBERON:0003135!7.88e-24!15;UBERON:0005156!8.36e-24!26;UBERON:0000990!8.36e-24!26;UBERON:0003101!2.90e-22!16;UBERON:0000079!2.90e-22!16;UBERON:0002323!3.72e-16!37;UBERON:0004458!3.72e-16!37;UBERON:0003886!1.11e-15!38;UBERON:0002553!3.16e-15!39;UBERON:0000992!1.60e-14!3;UBERON:0000464!8.58e-10!57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,6.54e-46,17;UBERON:0009196,6.54e-46,17;UBERON:0009117,6.54e-46,17;UBERON:0000991,2.31e-43,18;UBERON:0005564,2.31e-43,18;UBERON:0000473,1.39e-33,14;UBERON:0003133,1.59e-32,24;UBERON:0003135,2.38e-31,15;UBERON:0005156,5.08e-30,26;UBERON:0000990,5.08e-30,26;UBERON:0003101,2.14e-29,16;UBERON:0000079,2.14e-29,16;UBERON:0002323,4.54e-21,37;UBERON:0004458,4.54e-21,37;UBERON:0003886,1.64e-20,38;UBERON:0002553,5.55e-20,39;UBERON:0000992,2.70e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,4.09550888434687,3.4206261464251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75006069509643,2.45403664607689,1.18269287843545,0.704143431874524,2.73429208172295,4.61381115473128,1.44950472495604,1.72818003754719,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,4.09550888434687,3.4206261464251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75006069509643,2.45403664607689,1.18269287843545,0.704143431874524,2.73429208172295,4.61381115473128,1.44950472495604,1.72818003754719,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Sohlh1 | |short_description=p2@Sohlh1 | ||
}} | }} |
Latest revision as of 10:42, 26 September 2015
Short description: | p2@Sohlh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sohlh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:592 |
Association with transcript: | -48bp_to_ENSMUST00000076989, NM_001001714, uc008itn.1_5end |
EntrezGene: | Sohlh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 6.54e-46 | 17 |
indifferent external genitalia | 6.54e-46 | 17 |
indifferent gonad | 6.54e-46 | 17 |
gonad | 2.31e-43 | 18 |
gonad primordium | 2.31e-43 | 18 |
testis | 1.39e-33 | 14 |
reproductive organ | 1.59e-32 | 24 |
male reproductive organ | 2.38e-31 | 15 |
reproductive structure | 5.08e-30 | 26 |
reproductive system | 5.08e-30 | 26 |
male organism | 2.14e-29 | 16 |
male reproductive system | 2.14e-29 | 16 |
body cavity | 4.54e-21 | 37 |
body cavity or lining | 4.54e-21 | 37 |
body cavity precursor | 1.64e-20 | 38 |
anatomical cavity | 5.55e-20 | 39 |
female gonad | 2.70e-14 | 3 |