FFCP PHASE1:Mm9::chr14:80041947..80041958,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16840 | |EntrezGene=16840 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=162 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENSMUST00000165204_5end | |association_with_transcript=43bp_to_ENSMUST00000165204_5end | ||
|cluster_id=chr14:80041947..80041958,- | |||
|description=CAGE_peak_5_at_Lect1_5end | |description=CAGE_peak_5_at_Lect1_5end | ||
|id=chr14:80041947..80041958,- | |id=chr14:80041947..80041958,- | ||
|ontology_enrichment_celltype=CL:0000181!2.53e-13!5;CL:0000417!2.53e-13!5;CL:0000668!2.53e-13!5;CL:0000412!2.53e-13!5;CL:0000182!2.53e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-26,5;CL:0000057,2.52e-09,1;CL:0000632,2.52e-09,1;CL:0000223,7.53e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.41e-13!22;UBERON:0007499!2.41e-13!22;UBERON:0006925!2.41e-13!22;UBERON:0009497!2.41e-13!22;UBERON:0000015!2.41e-13!22;UBERON:0002423!2.41e-13!22;UBERON:0006235!2.41e-13!22;UBERON:0008835!2.41e-13!22;UBERON:0003894!2.41e-13!22;UBERON:0004161!2.41e-13!22;UBERON:0008836!2.41e-13!22;UBERON:0009854!1.06e-12!23;UBERON:0009856!1.06e-12!23;UBERON:0002365!1.45e-11!25;UBERON:0002330!1.45e-11!25;UBERON:0005256!3.87e-08!47;UBERON:0005172!9.99e-08!49;UBERON:0005173!9.99e-08!49;UBERON:0002417!9.99e-08!49;UBERON:0000916!9.99e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.35e-29,22;UBERON:0007499,8.35e-29,22;UBERON:0006925,8.35e-29,22;UBERON:0009497,8.35e-29,22;UBERON:0000015,8.35e-29,22;UBERON:0002423,8.35e-29,22;UBERON:0006235,8.35e-29,22;UBERON:0008835,8.35e-29,22;UBERON:0003894,8.35e-29,22;UBERON:0004161,8.35e-29,22;UBERON:0008836,8.35e-29,22;UBERON:0009854,1.56e-27,23;UBERON:0009856,1.56e-27,23;UBERON:0002365,2.69e-25,25;UBERON:0002330,2.69e-25,25;UBERON:0005256,8.10e-14,45;UBERON:0003914,3.33e-13,47;UBERON:0005172,1.22e-12,49;UBERON:0005173,1.22e-12,49;UBERON:0002417,1.22e-12,49;UBERON:0000916,1.22e-12,49;UBERON:0003929,3.42e-11,55;UBERON:0002368,3.33e-10,60;UBERON:0003104,5.02e-10,61;UBERON:0009142,5.02e-10,61;UBERON:0002530,2.29e-09,65;UBERON:0000490,3.26e-09,66;UBERON:0009569,3.26e-09,66;UBERON:0005911,8.80e-09,69;UBERON:0000949,2.19e-08,72;UBERON:0005177,1.41e-07,79;UBERON:0001041,1.79e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,2.719885334831,9.71465744948071,18.8435161059824,44.8026887097336,8.70755404816862,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0836102523161,0,0,0,0,0,0,2.01387296215567,0,0,0,0,0,2.02063102357689,1.4351793081753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,2.719885334831,9.71465744948071,18.8435161059824,44.8026887097336,8.70755404816862,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0836102523161,0,0,0,0,0,0,2.01387296215567,0,0,0,0,0,2.02063102357689,1.4351793081753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p5@Lect1 | |short_description=p5@Lect1 | ||
}} | }} |
Latest revision as of 10:57, 26 September 2015
Short description: | p5@Lect1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lect1_5end |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | 43bp_to_ENSMUST00000165204_5end |
EntrezGene: | Lect1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.82e-26 | 5 |
fibroblast | 2.52e-09 | 1 |
hepatic stellate cell | 2.52e-09 | 1 |
endodermal cell | 7.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 8.35e-29 | 22 |
epithelial sac | 8.35e-29 | 22 |
digestive gland | 8.35e-29 | 22 |
epithelium of foregut-midgut junction | 8.35e-29 | 22 |
anatomical boundary | 8.35e-29 | 22 |
hepatobiliary system | 8.35e-29 | 22 |
foregut-midgut junction | 8.35e-29 | 22 |
hepatic diverticulum | 8.35e-29 | 22 |
liver primordium | 8.35e-29 | 22 |
septum transversum | 8.35e-29 | 22 |
liver bud | 8.35e-29 | 22 |
digestive tract diverticulum | 1.56e-27 | 23 |
sac | 1.56e-27 | 23 |
exocrine gland | 2.69e-25 | 25 |
exocrine system | 2.69e-25 | 25 |
trunk mesenchyme | 8.10e-14 | 45 |
epithelial tube | 3.33e-13 | 47 |
abdomen element | 1.22e-12 | 49 |
abdominal segment element | 1.22e-12 | 49 |
abdominal segment of trunk | 1.22e-12 | 49 |
abdomen | 1.22e-12 | 49 |
gut epithelium | 3.42e-11 | 55 |
endocrine gland | 3.33e-10 | 60 |
mesenchyme | 5.02e-10 | 61 |
entire embryonic mesenchyme | 5.02e-10 | 61 |
gland | 2.29e-09 | 65 |
unilaminar epithelium | 3.26e-09 | 66 |
subdivision of trunk | 3.26e-09 | 66 |
endo-epithelium | 8.80e-09 | 69 |
endocrine system | 2.19e-08 | 72 |
trunk region element | 1.41e-07 | 79 |
foregut | 1.79e-07 | 80 |