FFCP PHASE1:Mm9::chr4:133556745..133556765,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:133556745..133556765,-
|short_description=p2@Dhdds
|description=CAGE_peak_2_at_Dhdds_5end
|association_with_transcript=13bp_to_NM_026144,uc008vds.1,uc008vd...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67422 | |EntrezGene=67422 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A3KGL1,Q99KU1 | |UniProt=A3KGL1,Q99KU1 | ||
|association_with_transcript=13bp_to_NM_026144,uc008vds.1,uc008vdt.1,uc008vdu.1,uc008vdv.1_5end | |||
|cluster_id=chr4:133556745..133556765,- | |||
|description=CAGE_peak_2_at_Dhdds_5end | |||
|id=chr4:133556745..133556765,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.43e-09!71;UBERON:0003075!8.43e-09!71;UBERON:0007284!8.43e-09!71;UBERON:0001049!6.56e-08!52;UBERON:0005068!6.56e-08!52;UBERON:0006241!6.56e-08!52;UBERON:0007135!6.56e-08!52;UBERON:0000033!6.58e-08!63;UBERON:0003056!8.16e-08!49;UBERON:0000955!6.04e-07!50;UBERON:0006238!6.04e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.56e-08,73;UBERON:0000955,4.09e-08,47;UBERON:0006238,4.09e-08,47;UBERON:0001049,6.24e-08,52;UBERON:0005068,6.24e-08,52;UBERON:0006241,6.24e-08,52;UBERON:0007135,6.24e-08,52;UBERON:0003056,8.94e-08,49;UBERON:0002616,1.02e-07,46;UBERON:0002346,1.74e-07,64;UBERON:0003075,1.74e-07,64;UBERON:0007284,1.74e-07,64 | |||
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|phase1_expression=3.68342348341026,1.04692622291808,0,0.30246421130683,0.500895729946347,1.34303417529512,0.467225281191051,0.516493293766305,0.703943610758334,0.234064526321993,1.19852577757853,0.558405112967355,0.342401459862411,0.262261207256992,1.33243904726265,1.82227740650843,2.09868563438444,0.946386496074713,1.09691546884591,0.42438965179803,1.78590909317247,2.28369187762036,1.04479915655574,0.799962113967033,0.45881856213434,0,0,0.646413698057667,0.570070258369122,0.252030129759931,1.33038306393183,2.54012269383853,1.23012957516914,0,3.46621943701529,1.66234645358492,2.24586291888606,5.4409111995798,3.1253413780952,7.85285615960697,5.29408339227913,6.14740936462601,7.2826552954673,0.881277725829041,0.304130793658544,2.20256102594018,3.12956537739216,0.218025156380447,1.09843091367236,1.36100929351998,1.1198913730029,0,1.00669563634642,1.45072428402269,1.00828139742739,0.514518872071894,2.0057340795713,0.515672092277442,3.43937983461316,2.64495489636016,0.633831403506179,1.69422266034566,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,1.79760066311043,0.384218305321555,2.17748185847803,1.75507719831198,3.15487442027073,1.99955689082663,6.62605622854841,3.06226998037385,2.1086003624012,3.67687514644008,0,2.80912143787413,1.38245879930619,1.84640802822271,3.7509933876988,2.08365348222704,0.837548997004143,3.37657566019008,1.5279824777681,2.65165726926301,2.27794689278565,2.42319279572891,1.74170244666323,0.831287161174641,2.02905142091174,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,0.448026887097336,0.842666520790511,2.38602451609281,1.81850203222008,0.70667914902068,2.95771181531029,3.84979432242953,0,0,1.08245520505607,2.78695852022608,0.505524445014783,1.25602267690966,2.58937883647172,3.56261133755579,4.3371331691534,3.04465478312141,3.45923245884088,3.01445281105245,3.64524992120685,4.27266410520897,5.93267922562497,2.02439099687876,6.19227386364912,3.39710384889559,2.65009822152472,1.45462575940567,0,4.68449275218475,5.02672096352292,0.766371165625774,2.63593273913025,2.99951365496704,3.93917703926501,5.54225365797844,3.20250421973039,5.6544458450789,5.56237824615285,5.8814555185976,3.74018480207208,6.48965052271031,4.48093200941392,3.11017426525233,3.0326731012041,1.68353484709179,3.90361328888111,3.21862946206862,2.70093194708024,3.61691562805716,6.5995404176788,4.22775276940004,6.09061209638237,2.32833033665114,7.11374376678379,6.99692496620931,5.10258260075452,1.53437012699302,5.28289773528636,2.78601733217733,3.08673204611915,4.37875387000685,1.40442637462647,6.69104558498259,5.11494298912067,3.10688658803253,3.04883877975425,2.34080679899319,3.07768156260773,1.77087808572663,1.23413690309903,2.09280550275367,3.21928081679543,3.50296027101508,2.63295759861569,1.97000956894914,2.1888578577381,1.31579988682799,1.09775057645525,1.74468344388483,5.25724871410318,5.04232600658494,0.991256348951394,0.528901133327089,2.98603550749328,4.64473343720877,3.22168653305233,2.8235693447268,5.11469500843202,2.09248188723815,0.474529061544512,2.30578536613615,2.01068167040216,2.18852119245266,2.33956904542944,1.79763881730844,1.08069024937347,1.1948476395262,3.60369011810855,3.42745537829186,4.50830942692322,2.44381593414377,2.13347735884388,3.85747009396752,3.35153646758564,2.95220295959204,1.41298855057237,2.46794327843601,2.37162101669719,2.66952169145751,3.73462090715086,2.9232074610031,3.24576194221605,2.65294875727659,1.78238096246994,2.87696137450811,2.10775794807546,2.47105271869273,5.75072826109418,2.23284568601102,1.24815069245824,1.76805214562978,1.4351793081753,2.8946611281802,1.66277871149944,2.4633883530163,2.60743962307241,1.86719594352707,1.87752198630802,2.84760637651087,2.38043640886014,4.87834119644497,2.36452716159286,2.6575762757853,3.18909537314974,2.29408640602033,1.89953480052485,3.18227928879325,1.50791283939272,0,4.42587845717133,6.07060841870411,6.10092241953609,6.68106613575558,0.655739781506702,1.51482556322624,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,1.33679204449436,1.69845918473299,0.404810701674894,0.584511715822624,1.18586333383957,5.14114106274891,2.2710413633323,4.45164009168138,7.00413925220377,2.8044920905331,2.65490276679926,3.8844901784797,3.02323556964751,1.69744571780308,2.36241514304618,3.07435147943927,3.87642439752332,4.72593848320757,2.85197902707777,2.52829406348653,4.21674434299995,5.15677716240934,4.76615448055303,2.52085531643834,2.97524972700335,3.42939256050548,3.90148514013002,3.92411398724555,4.11372551505302,6.08929898229199,3.75474732901937,4.2366414172764,6.83638033970382,2.30840754118072,2.9063596805263,3.31721087104857,2.86493625607528,2.79039529566604,0.291480836629851,6.48988557036784,2.05045056957423,5.15967169908056,3.33350149265481,1.50694765603753,2.59719032669948,4.34678529092393,2.71965487990169,2.6590775941495,3.17859939750175,0.954670618015114,4.74503990371703,3.45643094115643,4.21220829205025,2.29997125615916,1.52853794622324,2.69728692769641,2.89287095038676,1.8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| ||
|short_description=p2@Dhdds | |||
}} | }} |
Latest revision as of 11:50, 26 September 2015
Short description: | p2@Dhdds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dhdds_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_026144, uc008vds.1, uc008vdt.1, uc008vdu.1, uc008vdv.1_5end |
EntrezGene: | Dhdds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.56e-08 | 73 |
brain | 4.09e-08 | 47 |
future brain | 4.09e-08 | 47 |
neural tube | 6.24e-08 | 52 |
neural rod | 6.24e-08 | 52 |
future spinal cord | 6.24e-08 | 52 |
neural keel | 6.24e-08 | 52 |
pre-chordal neural plate | 8.94e-08 | 49 |
regional part of brain | 1.02e-07 | 46 |
neurectoderm | 1.74e-07 | 64 |
neural plate | 1.74e-07 | 64 |
presumptive neural plate | 1.74e-07 | 64 |