FFCP PHASE1:Mm9::chr6:122902702..122902715,+: Difference between revisions
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{{FFCP|EntrezGene=73149|HGNC=|MCL_coexpression_id=86|UniProt=Q8JZX6|association_with_transcript=40bp_to_ENSMUST00000088468,NM_153197,uc009dpw.1_5end|description=CAGE_peak_2_at_Clec4a3_5end|id=chr6:122902702..122902715,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,3.71e-14,6;CL:0000556,3.71e-14,6;CL:0000839,2.34e-11,13;CL:0000050,3.23e-09,9;CL:0000763,5.72e-09,16;CL:0002092,6.88e-09,3;CL:0002540,6.88e-09,3;CL:0002027,1.11e-07,3;CL:0002006,1.11e-07,3;CL:0002024,1.11e-07,3;CL:0000049,2.44e-07,19;CL:0002476,8.43e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.56e-08,3;DOID:4045,1.56e-08,3|ontology_enrichment_uberon=UBERON:0000926!6.19e-10!193;UBERON:0004120!6.19e-10!193;UBERON:0006603!6.19e-10!193;UBERON:0002405!1.22e-08!70;UBERON:0001474!7.90e-08!22;UBERON:0004765!7.90e-08!22;UBERON:0001434!7.90e-08!22;UBERON:0002371!8.74e-08!16;UBERON:0009569!2.13e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-17,16;UBERON:0002204,6.01e-15,32;UBERON:0001474,1.77e-14,22;UBERON:0004765,1.77e-14,22;UBERON:0001434,1.77e-14,22;UBERON:0002106,3.71e-14,6;UBERON:0004457,3.71e-14,6;UBERON:0000042,3.71e-14,6;UBERON:0004854,3.71e-14,6;UBERON:0009034,3.71e-14,6;UBERON:0002095,3.71e-14,6;UBERON:0004782,3.71e-14,6;UBERON:0003281,3.71e-14,6;UBERON:0009664,3.71e-14,6;UBERON:0002296,3.71e-14,6;UBERON:0005602,3.71e-14,6;UBERON:0001179,3.71e-14,6;UBERON:0006293,3.71e-14,6;UBERON:0002193,3.69e-13,48;UBERON:0002405,3.69e-13,48;UBERON:0002390,1.74e-12,45;UBERON:0003061,1.74e-12,45;UBERON:0003887,5.85e-11,10;UBERON:0000926,2.77e-08,120;UBERON:0004120,2.77e-08,120;UBERON:0006603,2.77e-08,120;UBERON:0003081,5.86e-07,87|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.99865857089398,1.21485160433896,2.09868563438444,2.36596624018678,2.05671650408608,2.12194825899015,0.510259740906419,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,1.25559489221072,5.4693474116666,5.23523743973798,2.35292595212406,3.41522742479223,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,3.5995988691256,7.9109309005358,2.8419204597844,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.17875767294343,0.593768556259299,0,0,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,1.24406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.820837320395476,0.324275238183423,0.438599962275997,1.09775057645525,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0.196558995113203,0,0.405720242777006,0.964708639009667,0.763877555344259,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0.964887042726734,2.77129785249907,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.952174563544055,1.17080188714679,0.472905432318573,1.32878813789265,0.318909537314974,2.13022309130459,2.41758974612254,1.3018415272336,21.1107797514981,33.72215239676,0.491764273019036,0.551873492609465,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0,1.31976098378028,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.8244312647074,0.161464426695906,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,0.18542530201051,4.95525554313773,2.88941615148511,2.77791791054568,1.13021074202815,1.23024804948923,1.14389086603261,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0.632022241256357,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.79472541912506,0,0,0.201932899896295,0,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,1.50145980360946,1.09890974560359,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0.463735671240843|short_description=p2@Clec4a3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73149 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZX6 | |||
|association_with_transcript=40bp_to_ENSMUST00000088468,NM_153197,uc009dpw.1_5end | |||
|cluster_id=chr6:122902702..122902715,+ | |||
|description=CAGE_peak_2_at_Clec4a3_5end | |||
|id=chr6:122902702..122902715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.71e-14,6;CL:0000556,3.71e-14,6;CL:0000839,2.34e-11,13;CL:0000050,3.23e-09,9;CL:0000763,5.72e-09,16;CL:0002092,6.88e-09,3;CL:0002540,6.88e-09,3;CL:0002027,1.11e-07,3;CL:0002006,1.11e-07,3;CL:0002024,1.11e-07,3;CL:0000049,2.44e-07,19;CL:0002476,8.43e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.56e-08,3;DOID:4045,1.56e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!6.19e-10!193;UBERON:0004120!6.19e-10!193;UBERON:0006603!6.19e-10!193;UBERON:0002405!1.22e-08!70;UBERON:0001474!7.90e-08!22;UBERON:0004765!7.90e-08!22;UBERON:0001434!7.90e-08!22;UBERON:0002371!8.74e-08!16;UBERON:0009569!2.13e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-17,16;UBERON:0002204,6.01e-15,32;UBERON:0001474,1.77e-14,22;UBERON:0004765,1.77e-14,22;UBERON:0001434,1.77e-14,22;UBERON:0002106,3.71e-14,6;UBERON:0004457,3.71e-14,6;UBERON:0000042,3.71e-14,6;UBERON:0004854,3.71e-14,6;UBERON:0009034,3.71e-14,6;UBERON:0002095,3.71e-14,6;UBERON:0004782,3.71e-14,6;UBERON:0003281,3.71e-14,6;UBERON:0009664,3.71e-14,6;UBERON:0002296,3.71e-14,6;UBERON:0005602,3.71e-14,6;UBERON:0001179,3.71e-14,6;UBERON:0006293,3.71e-14,6;UBERON:0002193,3.69e-13,48;UBERON:0002405,3.69e-13,48;UBERON:0002390,1.74e-12,45;UBERON:0003061,1.74e-12,45;UBERON:0003887,5.85e-11,10;UBERON:0000926,2.77e-08,120;UBERON:0004120,2.77e-08,120;UBERON:0006603,2.77e-08,120;UBERON:0003081,5.86e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.99865857089398,1.21485160433896,2.09868563438444,2.36596624018678,2.05671650408608,2.12194825899015,0.510259740906419,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,1.25559489221072,5.4693474116666,5.23523743973798,2.35292595212406,3.41522742479223,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,3.5995988691256,7.9109309005358,2.8419204597844,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.17875767294343,0.593768556259299,0,0,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.41557608911912,0,0,1.24406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.820837320395476,0.324275238183423,0.438599962275997,1.09775057645525,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0.196558995113203,0,0.405720242777006,0.964708639009667,0.763877555344259,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0.964887042726734,2.77129785249907,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.952174563544055,1.17080188714679,0.472905432318573,1.32878813789265,0.318909537314974,2.13022309130459,2.41758974612254,1.3018415272336,21.1107797514981,33.72215239676,0.491764273019036,0.551873492609465,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0,1.31976098378028,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.8244312647074,0.161464426695906,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,0.18542530201051,4.95525554313773,2.88941615148511,2.77791791054568,1.13021074202815,1.23024804948923,1.14389086603261,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.288030006257865,0.632022241256357,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.79472541912506,0,0,0.201932899896295,0,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,1.50145980360946,1.09890974560359,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Clec4a3 | |||
}} |
Latest revision as of 15:13, 26 September 2015
Short description: | p2@Clec4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clec4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 40bp_to_ENSMUST00000088468, NM_153197, uc009dpw.1_5end |
EntrezGene: | Clec4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.71e-14 | 6 |
megakaryocyte | 3.71e-14 | 6 |
myeloid lineage restricted progenitor cell | 2.34e-11 | 13 |
megakaryocyte-erythroid progenitor cell | 3.23e-09 | 9 |
myeloid cell | 5.72e-09 | 16 |
bone marrow cell | 6.88e-09 | 3 |
mesenchymal stem cell of the bone marrow | 6.88e-09 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 1.11e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.11e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.11e-07 | 3 |
common myeloid progenitor | 2.44e-07 | 19 |
bone marrow macrophage | 8.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-17 | 16 |
musculoskeletal system | 6.01e-15 | 32 |
bone element | 1.77e-14 | 22 |
skeletal element | 1.77e-14 | 22 |
skeletal system | 1.77e-14 | 22 |
spleen | 3.71e-14 | 6 |
cavity lining | 3.71e-14 | 6 |
serous membrane | 3.71e-14 | 6 |
gastrointestinal system mesentery | 3.71e-14 | 6 |
stomach region | 3.71e-14 | 6 |
mesentery | 3.71e-14 | 6 |
gastrointestinal system serosa | 3.71e-14 | 6 |
mesentery of stomach | 3.71e-14 | 6 |
gut mesentery | 3.71e-14 | 6 |
dorsal mesentery | 3.71e-14 | 6 |
dorsal mesogastrium | 3.71e-14 | 6 |
peritoneal cavity | 3.71e-14 | 6 |
spleen primordium | 3.71e-14 | 6 |
hemolymphoid system | 3.69e-13 | 48 |
immune system | 3.69e-13 | 48 |
hematopoietic system | 1.74e-12 | 45 |
blood island | 1.74e-12 | 45 |
intraembryonic coelom | 5.85e-11 | 10 |
mesoderm | 2.77e-08 | 120 |
mesoderm-derived structure | 2.77e-08 | 120 |
presumptive mesoderm | 2.77e-08 | 120 |
lateral plate mesoderm | 5.86e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.56e-08 | 3 |
muscle cancer | 1.56e-08 | 3 |