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FFCP PHASE1:Mm9::chr6:124662297..124662371,+: Difference between revisions

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{{FFCP|EntrezGene=12034|HGNC=|MCL_coexpression_id=155|UniProt=O35129,E9Q313,Q3V235,Q3V2V2|association_with_transcript=0bp_to_ENSMUST00000004375,ENSMUST00000100958,ENSMUST00000124779,ENSMUST00000145447,ENSMUST00000150847,NM_007531,uc009drh.1,uc009dri.1_5end|description=CAGE_peak_1_at_Phb2_5end|id=chr6:124662297..124662371,+|ontology_enrichment_celltype=CL:0002320!2.85e-09!46;CL:0000134!2.85e-09!46;CL:0000219!4.83e-09!54;CL:0000063!1.83e-08!66|ontology_enrichment_celltype_v019_2=CL:0002320,2.85e-09,46;CL:0000134,2.85e-09,46;CL:0000219,4.83e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!5.97e-11!23;UBERON:0009856!5.97e-11!23;UBERON:0002107!8.82e-11!22;UBERON:0007499!8.82e-11!22;UBERON:0006925!8.82e-11!22;UBERON:0009497!8.82e-11!22;UBERON:0000015!8.82e-11!22;UBERON:0002423!8.82e-11!22;UBERON:0006235!8.82e-11!22;UBERON:0008835!8.82e-11!22;UBERON:0003894!8.82e-11!22;UBERON:0004161!8.82e-11!22;UBERON:0008836!8.82e-11!22;UBERON:0002384!2.85e-09!46;UBERON:0002365!6.69e-09!25;UBERON:0002330!6.69e-09!25;UBERON:0002405!1.56e-08!70;UBERON:0005172!4.61e-08!49;UBERON:0005173!4.61e-08!49;UBERON:0002417!4.61e-08!49;UBERON:0000916!4.61e-08!49;UBERON:0003914!7.00e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.97e-11,23;UBERON:0009856,5.97e-11,23;UBERON:0002107,8.82e-11,22;UBERON:0007499,8.82e-11,22;UBERON:0006925,8.82e-11,22;UBERON:0009497,8.82e-11,22;UBERON:0000015,8.82e-11,22;UBERON:0002423,8.82e-11,22;UBERON:0006235,8.82e-11,22;UBERON:0008835,8.82e-11,22;UBERON:0003894,8.82e-11,22;UBERON:0004161,8.82e-11,22;UBERON:0008836,8.82e-11,22;UBERON:0002384,2.85e-09,46;UBERON:0002365,6.69e-09,25;UBERON:0002330,6.69e-09,25;UBERON:0005172,4.61e-08,49;UBERON:0005173,4.61e-08,49;UBERON:0002417,4.61e-08,49;UBERON:0000916,4.61e-08,49;UBERON:0003914,7.00e-08,47|phase1_expression=134.364882720922,160.877662921745,144.689758125872,163.330674105688,182.32604570047,204.30907391677,249.731912796617,164.115744094243,275.664317972963,340.329821272178,491.73800474365,539.658655603451,150.48544160953,154.034749062273,323.782688484824,284.680225950095,251.842276126133,185.176291065286,178.797221421883,186.307057139335,113.022532610772,227.475569201228,254.408594621323,283.18658834433,288.826284863567,202.129651368487,229.165381956628,244.128906633112,314.678782619755,252.534190019451,292.019082533036,558.826992644475,516.654421571039,459.596874944772,380.995286451931,435.368536193891,386.900930117189,66.5465292871683,91.4162353092846,55.4935168612226,62.3525377312875,66.2554120409692,50.9785870682711,119.85377071275,105.127877674637,129.033366769662,284.008057998338,227.618263261186,171.135536350154,132.017901471438,181.842361691346,280.317500511695,163.252475694177,142.896341976235,152.922678609821,142.778986999951,151.576189727602,103.650090547766,179.657017243323,223.234193252798,198.389229297434,270.059092059098,237.441710561674,228.574528189475,273.915982431052,265.719562989841,223.50168244673,221.693962170537,161.341036751991,189.008313664367,165.105094660835,158.250645359707,174.044410269871,160.585437770805,158.720100006199,171.893913096074,90.2950224194987,82.7413950792016,79.4145776934779,183.58571252043,155.711969411301,159.920404760925,96.5973176544778,84.414391504752,85.5670187550137,154.385378788202,125.714194145608,158.066730059855,194.919221639616,130.738798984739,90.1478559862218,329.542344883871,425.662054901052,405.856800111639,382.718309876677,431.897919161832,233.27818183884,189.688949029378,225.49425199529,209.177028110121,136.758960603157,120.626888769459,56.0571527354621,71.1066703153331,216.274549970203,198.380774667002,216.869986911342,249.263409426708,86.2263152545082,140.723147833454,255.02343034622,279.803774568858,238.917655157277,201.817615699962,160.273407825966,189.63088631648,125.080653673593,204.029692613995,191.960489773123,165.972788046042,148.626341923845,142.06844916862,225.534031073928,64.1189945455288,65.5568192326114,274.105420238819,203.565896535559,279.554672642928,233.555077360293,69.8024379626474,71.3700940397057,142.99465270444,67.6176605547955,72.6231898818139,75.6348482196799,64.8965052271031,148.07443503836,136.350039788662,152.139100577072,150.045043247056,182.428861033711,181.39276039801,165.116973031505,117.851167547529,105.592646682861,98.5194508990495,110.286929806801,102.187831441911,234.537976310932,158.281789100465,140.584948206995,190.261895747135,145.418711344988,132.335823278423,121.205678344279,159.227413454795,253.498960620078,239.848249430915,254.326331959055,205.675892127753,205.913880663402,189.965474841371,193.183704237532,213.685955677681,199.46737696338,231.138741081905,226.691024182678,186.47425176037,253.9158484165,251.832889897332,286.5782417446,319.739372499202,250.287131431798,229.627182498996,63.7178544149306,111.960218268661,124.898299967876,333.736615129393,184.494336712977,175.803160598352,208.120950035181,226.692281676637,230.161275379441,221.803080047244,234.891885464533,198.791638351881,182.4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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12034
|HGNC=
|MCL_coexpression_id=155
|TSSclassifier=NA
|UniProt=O35129,E9Q313,Q3V235,Q3V2V2
|association_with_transcript=0bp_to_ENSMUST00000004375,ENSMUST00000100958,ENSMUST00000124779,ENSMUST00000145447,ENSMUST00000150847,NM_007531,uc009drh.1,uc009dri.1_5end
|cluster_id=chr6:124662297..124662371,+
|description=CAGE_peak_1_at_Phb2_5end
|id=chr6:124662297..124662371,+
|ontology_enrichment_celltype=CL:0002320!2.85e-09!46;CL:0000134!2.85e-09!46;CL:0000219!4.83e-09!54;CL:0000063!1.83e-08!66
|ontology_enrichment_celltype_v019_2=CL:0002320,2.85e-09,46;CL:0000134,2.85e-09,46;CL:0000219,4.83e-09,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!5.97e-11!23;UBERON:0009856!5.97e-11!23;UBERON:0002107!8.82e-11!22;UBERON:0007499!8.82e-11!22;UBERON:0006925!8.82e-11!22;UBERON:0009497!8.82e-11!22;UBERON:0000015!8.82e-11!22;UBERON:0002423!8.82e-11!22;UBERON:0006235!8.82e-11!22;UBERON:0008835!8.82e-11!22;UBERON:0003894!8.82e-11!22;UBERON:0004161!8.82e-11!22;UBERON:0008836!8.82e-11!22;UBERON:0002384!2.85e-09!46;UBERON:0002365!6.69e-09!25;UBERON:0002330!6.69e-09!25;UBERON:0002405!1.56e-08!70;UBERON:0005172!4.61e-08!49;UBERON:0005173!4.61e-08!49;UBERON:0002417!4.61e-08!49;UBERON:0000916!4.61e-08!49;UBERON:0003914!7.00e-08!47
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.97e-11,23;UBERON:0009856,5.97e-11,23;UBERON:0002107,8.82e-11,22;UBERON:0007499,8.82e-11,22;UBERON:0006925,8.82e-11,22;UBERON:0009497,8.82e-11,22;UBERON:0000015,8.82e-11,22;UBERON:0002423,8.82e-11,22;UBERON:0006235,8.82e-11,22;UBERON:0008835,8.82e-11,22;UBERON:0003894,8.82e-11,22;UBERON:0004161,8.82e-11,22;UBERON:0008836,8.82e-11,22;UBERON:0002384,2.85e-09,46;UBERON:0002365,6.69e-09,25;UBERON:0002330,6.69e-09,25;UBERON:0005172,4.61e-08,49;UBERON:0005173,4.61e-08,49;UBERON:0002417,4.61e-08,49;UBERON:0000916,4.61e-08,49;UBERON:0003914,7.00e-08,47
|phase1_expression=134.364882720922,160.877662921745,144.689758125872,163.330674105688,182.32604570047,204.30907391677,249.731912796617,164.115744094243,275.664317972963,340.329821272178,491.73800474365,539.658655603451,150.48544160953,154.034749062273,323.782688484824,284.680225950095,251.842276126133,185.176291065286,178.797221421883,186.307057139335,113.022532610772,227.475569201228,254.408594621323,283.18658834433,288.826284863567,202.129651368487,229.165381956628,244.128906633112,314.678782619755,252.534190019451,292.019082533036,558.826992644475,516.654421571039,459.596874944772,380.995286451931,435.368536193891,386.900930117189,66.5465292871683,91.4162353092846,55.4935168612226,62.3525377312875,66.2554120409692,50.9785870682711,119.85377071275,105.127877674637,129.033366769662,284.008057998338,227.618263261186,171.135536350154,132.017901471438,181.842361691346,280.317500511695,163.252475694177,142.896341976235,152.922678609821,142.778986999951,151.576189727602,103.650090547766,179.657017243323,223.234193252798,198.389229297434,270.059092059098,237.441710561674,228.574528189475,273.915982431052,265.719562989841,223.50168244673,221.693962170537,161.341036751991,189.008313664367,165.105094660835,158.250645359707,174.044410269871,160.585437770805,158.720100006199,171.893913096074,90.2950224194987,82.7413950792016,79.4145776934779,183.58571252043,155.711969411301,159.920404760925,96.5973176544778,84.414391504752,85.5670187550137,154.385378788202,125.714194145608,158.066730059855,194.919221639616,130.738798984739,90.1478559862218,329.542344883871,425.662054901052,405.856800111639,382.718309876677,431.897919161832,233.27818183884,189.688949029378,225.49425199529,209.177028110121,136.758960603157,120.626888769459,56.0571527354621,71.1066703153331,216.274549970203,198.380774667002,216.869986911342,249.263409426708,86.2263152545082,140.723147833454,255.02343034622,279.803774568858,238.917655157277,201.817615699962,160.273407825966,189.63088631648,125.080653673593,204.029692613995,191.960489773123,165.972788046042,148.626341923845,142.06844916862,225.534031073928,64.1189945455288,65.5568192326114,274.105420238819,203.565896535559,279.554672642928,233.555077360293,69.8024379626474,71.3700940397057,142.99465270444,67.6176605547955,72.6231898818139,75.6348482196799,64.8965052271031,148.07443503836,136.350039788662,152.139100577072,150.045043247056,182.428861033711,181.39276039801,165.116973031505,117.851167547529,105.592646682861,98.5194508990495,110.286929806801,102.187831441911,234.537976310932,158.281789100465,140.584948206995,190.261895747135,145.418711344988,132.335823278423,121.205678344279,159.227413454795,253.498960620078,239.848249430915,254.326331959055,205.675892127753,205.913880663402,189.965474841371,193.183704237532,213.685955677681,199.46737696338,231.138741081905,226.691024182678,186.47425176037,253.9158484165,251.832889897332,286.5782417446,319.739372499202,250.287131431798,229.627182498996,63.7178544149306,111.960218268661,124.898299967876,333.736615129393,184.494336712977,175.803160598352,208.120950035181,226.692281676637,230.161275379441,221.803080047244,234.891885464533,198.791638351881,182.469361588996,182.045171917653,172.543217100421,239.984782110677,196.037211236348,207.106924184542,330.591151361221,168.173810561521,201.746846854814,173.918233979898,181.34557550173,162.434558865978,151.451506412596,198.830869328524,189.026468321015,196.69507929135,359.597036656712,296.316907751783,308.204504337502,292.995332437464,265.54389889755,262.883104130134,257.426736151015,260.365004392984,382.963405642634,314.098256687165,194.087078811929,347.579645122382,317.654351230623,303.852390170375,348.927969300119,369.551737364339,75.5640547781413,199.34496518255,176.491069486714,158.541910114026,150.671139401218,126.802236883455,128.067478796675,104.006234308207,94.5810864637146,90.1361286870514,78.1328366421687,87.6668733729198,79.9531466039097,71.8905821150113,155.31502245745,168.066856299981,151.463396089863,174.667960410896,74.6560243443233,67.8655665368856,269.672985144631,186.576015204032,168.796897387697,156.565936462952,137.00928095806,159.870125830257,153.731085116852,123.421367423931,158.685795056559,148.173719961035,153.766945621198,82.5795783204044,130.868758562024,191.776655149634,144.480732946622,112.014713498352,209.737318577141,259.77528068583,251.533199394673,189.359500074922,228.563665089718,166.014979889721,154.281691021428,159.954840970102,137.964485434887,177.928694717864,211.891403235748,181.518556116809,74.2158340543258,164.035656662524,201.282111965966,169.326257674958,145.06431111938,160.888673477068,138.714824367588,169.891441605946,176.47312446391,121.803440746697,153.928821842363,134.382296147306,145.963841733099,128.949033496397,160.555802684219,136.236946788401,242.803536912666,76.024373824309,207.095507526997,181.414056939673,187.046472643409,224.346832292587,242.905642660262,204.298908673425,149.92097525458,157.725286768763,165.5635686177,179.478076186841,199.924347943278,161.842295832972,160.387931120375,154.725339050707,151.106894112355,146.462680173915,150.925210154463,160.718148378194,167.073700573121,137.937327505298,150.506014628679,167.309015023212,177.536960260466,137.282538970898,163.903815993241,143.950618918143,139.537756749801,114.970471817208,129.501290365753,107.988102009225,98.50626214019,145.049104368334,262.123703370182,232.434896064004,235.67637288172,185.292630015843,170.865965111888,159.499361512999,143.849599468038,131.660250732384,134.88604777935,127.948428938651,131.763054760145,116.80117575136,89.0601994623555,179.117003056017,318.771829045157,368.813664521555,273.148270824356,102.776864025125,143.577093720154,119.598010646524,152.844654283374,151.976347522715,111.820864838179,91.6047220649282,100.256714851894,89.7073611834049,89.7458100899541,95.935024968492,89.1029700305984,83.3094225964808,78.8467791632516,86.9837323743057,210.48074090071,173.97484480285,193.782642530942,178.440330328128,238.539779070644,224.656767325917,230.469856730275,230.9652991648,211.164839911414,208.980594128661,232.44051799935,224.088093566659,192.058731820729,200.590802484455,184.99964550603,188.612301748097,191.556790786846,198.88940629808,180.493624551848,193.566579976732,210.17885171226,200.725136766211,191.225824337751,204.793101034951,198.100245774271,196.390504916581,204.51347367176,207.29893261302,198.409810328804,217.723201403202,206.06902648169,180.06619378253,216.073990793596,205.601188253777,200.429968809406,199.848462350357,196.502551094143,205.201856616125,240.832010074674,217.723730670962,218.419501154437
|short_description=p1@Phb2
}}

Latest revision as of 15:52, 26 September 2015

Short description:p1@Phb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Phb2_5end
Coexpression cluster:MCL_coexpression_mm9:155
Association with transcript: 0bp_to_ENSMUST00000004375, ENSMUST00000100958, ENSMUST00000124779, ENSMUST00000145447, ENSMUST00000150847, NM_007531, uc009drh.1, uc009dri.1_5end
EntrezGene:Phb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Phb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7134.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5160.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6144.69
CD326+ enterocyte, pool1.CNhs13542.11848-124I3163.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I4182.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7204.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8249.73
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9164.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7275.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2340.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6491.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1539.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4150.49
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8154.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1323.78
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3284.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5251.84
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2185.18
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4178.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6186.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3113.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2227.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9254.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1283.19
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2288.83
GP2+ M cell, pool1.CNhs13228.11845-124H9202.13
GP2+ M cell, pool2.CNhs13231.11846-124I1229.17
GP2+ M cell, pool3.CNhs13240.11847-124I2244.13
Ileum epithelium, pool1.CNhs13199.10252-104B9314.68
Ileum epithelium, pool2.CNhs13232.10253-104C1252.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8292.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3558.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6516.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9459.60
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5381.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6435.37
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7386.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H191.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H355.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G962.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8119.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9105.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3129.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7284.01
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2227.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8171.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3132.02
Mouse Astrocytes, donor2.CNhs12078.11552-120C4181.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C4280.32
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2163.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9142.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1152.92
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1142.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1151.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5103.65
Mouse Granule cells, donor1.CNhs12131.11713-123C3179.66
Mouse Granule cells, donor2.CNhs12357.11731-123E3223.23
Mouse Granule cells, donor3.CNhs12108.11636-122C7198.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6270.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1237.44
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7228.57
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7273.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2265.72
Mouse Microglia, donor1.CNhs12629.11718-123C8223.50
Mouse Microglia, donor2.CNhs12634.11736-123E8221.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5161.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5189.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9165.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1158.25
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5174.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2160.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2158.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6171.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D390.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.74
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D779.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4183.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4155.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8159.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E496.60
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E584.41
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I685.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6154.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6125.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1158.07
Mouse Schwann, donor1.CNhs12507.11728-123D9194.92
Mouse Schwann, donor2.CNhs12573.11746-123F9130.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G390.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7329.54
Mouse hepatocyte, donor1.CNhs13078.11714-123C4425.66
Mouse hepatocyte, donor3.CNhs12615.11637-122C8405.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F4382.72
Mouse hepatocyte, donor8.CNhs13091.11824-124F6431.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7233.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7189.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3225.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8209.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6136.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1120.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I856.06
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1216.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2198.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3216.87
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6249.26
accessory axillary lymph node, adult.CNhs10475.1063-29H986.23
adrenal gland, adult.CNhs10508.49-24D7140.72
adrenal gland, embryo E14.CNhs11038.406-44C5255.02
adrenal gland, embryo E16.CNhs11004.1254-43D6279.80
adrenal gland, embryo E17.CNhs11043.1263-45I1238.92
adrenal gland, embryo E18.CNhs11026.1262-18F5201.82
adrenal gland, neonate N00.CNhs11191.1311-23C1160.27
adrenal gland, neonate N25.CNhs11223.1377-27I3189.63
amnion, adult pregnant day17.5.CNhs10488.583-22A8125.08
aorta, adult.CNhs10498.46-23H1204.03
bone (os femoris), adult.CNhs10483.56-12G2191.96
bone (os femoris), neonate N02.CNhs11227.1985-43F5165.97
bone (os femoris), neonate N16.CNhs11225.1525-43A6148.63
bone (os femoris), neonate N20.CNhs11195.1350-25C3142.07
cecum, adult.CNhs10467.37-13H4225.53
cerebellum, adult.CNhs10494.15-8B264.12
cerebellum, neonate N30.CNhs11135.1395-42I265.56
colon, adult.CNhs10468.36-18H7274.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7203.57
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1279.55
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4233.56
corpora quadrigemina, adult.CNhs10501.16-22A469.80
corpus striatum, adult.CNhs10487.19-21D871.37
corpus striatum, neonate N00.CNhs11226.630-43F1142.99
cortex, adult.CNhs10473.12-14D567.62
cortex, neonate N30.CNhs11107.1392-42F272.62
diencephalon, adult.CNhs10482.20-12F275.63
diencephalon, neonate N30.CNhs11201.1388-42B264.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1148.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2136.35
epididymis, adult.CNhs10490.58-23B2152.14
eyeball, adult.CNhs10484.31-12G4150.05
eyeball, embryo E12.CNhs11016.345-16C6182.43
eyeball, embryo E14.CNhs10521.399-16E2181.39
eyeball, embryo E15.CNhs10593.426-16C9165.12
eyeball, embryo E17.CNhs11023.1261-18D4117.85
eyeball, neonate N00.CNhs11207.633-15C6105.59
eyeball, neonate N01.CNhs11140.1532-43E798.52
eyeball, neonate N02.CNhs11205.1551-44G8110.29
eyeball, neonate N16.CNhs11188.777-19A2102.19
forelimb, embryo E11.CNhs10596.335-25E2234.54
forelimb, embryo E12.CNhs10600.359-14H2158.28
forelimb, embryo E13.CNhs10589.384-1E2140.58
forelimb, embryo E14.CNhs10577.413-26A8190.26
forelimb, embryo E15.CNhs11007.437-20E7145.42
forelimb, embryo E17.CNhs10598.1517-43C4132.34
forelimb, embryo E18.CNhs11008.1520-43B5121.21
gonad, embryo E13.CNhs11044.1564-45I6159.23
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8253.50
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2239.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5254.33
heart, embryo E11.CNhs10586.331-24E9205.68
heart, embryo E12.CNhs11015.353-12F5205.91
heart, embryo E13.CNhs11013.376-3I9189.97
heart, embryo E14.CNhs10597.403-26D4193.18
heart, embryo E15.CNhs11017.431-16C8213.69
heart, embryo E16.CNhs11021.457-17C6199.47
heart, embryo E17.CNhs11025.479-18E5231.14
heart, embryo E18.CNhs11030.1283-20G3226.69
heart, neonate N00.CNhs11213.639-21E3186.47
heart, neonate N03.CNhs11221.1349-25I2253.92
heart, neonate N10.CNhs11118.749-24G1251.83
heart, neonate N16.CNhs11209.782-15G1286.58
heart, neonate N20.CNhs11127.821-26I6319.74
heart, neonate N25.CNhs11196.1351-25D3250.29
heart, neonate N30.CNhs11202.1390-42D2229.63
hippocampus, adult.CNhs10478.13-16E863.72
hippocampus, neonate N00.CNhs11228.627-43G1111.96
intestinal mucosa, adult.CNhs10506.860-29I3124.90
intestine, adult.CNhs10496.178-9A3333.74
intestine, embryo E12.CNhs11019.1251-16I5184.49
intestine, embryo E13.CNhs11010.381-16D5175.80
intestine, embryo E15.CNhs10602.976-16D8208.12
intestine, embryo E16.CNhs10585.463-22H4226.69
intestine, embryo E17.CNhs10582.482-18D3230.16
intestine, embryo E18.CNhs10526.1289-20F7221.80
intestine, neonate N00.CNhs11126.644-26D1234.89
intestine, neonate N01.CNhs11192.1322-23E9198.79
intestine, neonate N06.CNhs11102.688-20B8182.47
intestine, neonate N07.CNhs11095.720-20F2182.05
intestine, neonate N10.CNhs11098.755-23A5172.54
intestine, neonate N20.CNhs11187.827-18D1239.98
intestine, neonate N25.CNhs11121.1352-25E3196.04
intestine, neonate N30.CNhs11131.1384-42G1207.11
kidney, embryo E14.CNhs10606.411-4I9330.59
kidney, embryo E15.CNhs10997.434-16F8168.17
kidney, embryo E16.CNhs10584.464-22A5201.75
kidney, embryo E17.CNhs11028.483-18I2173.92
kidney, embryo E18.CNhs11001.1288-20C7181.35
kidney, neonate N00.CNhs11214.646-21G7162.43
kidney, neonate N10.CNhs11206.758-6D5151.45
kidney, neonate N20.CNhs11113.832-19I1198.83
kidney, neonate N25.CNhs11122.1353-25F3189.03
kidney, neonate N30.CNhs11203.1385-42H1196.70
liver, adult pregnant day01.CNhs10466.508-5B2359.60
liver, embryo E12.CNhs10601.355-15F8296.32
liver, embryo E13.CNhs10524.378-3H6308.20
liver, embryo E14.CNhs10594.409-16E1293.00
liver, embryo E15.CNhs10520.433-16D7265.54
liver, embryo E16.CNhs10523.462-17F5262.88
liver, embryo E17.CNhs10510.481-18A3257.43
liver, embryo E18.CNhs10579.499-43G4260.37
liver, neonate N00.CNhs11117.641-24F4382.96
liver, neonate N03.CNhs11123.1345-25G2314.10
liver, neonate N06.CNhs11101.684-20A8194.09
liver, neonate N07.CNhs11103.716-20H2347.58
liver, neonate N10.CNhs11115.751-24B9317.65
liver, neonate N20.CNhs11220.823-25A3303.85
liver, neonate N25.CNhs11198.1368-26H1348.93
liver, neonate N30.CNhs11106.1382-42D1369.55
lung, adult.CNhs10474.28-22B175.56
lung, embryo E12.CNhs10522.354-16G2199.34
lung, embryo E14.CNhs10604.404-26F8176.49
lung, embryo E15.CNhs11020.432-17C5158.54
lung, embryo E16.CNhs10998.458-17B6150.67
lung, embryo E17.CNhs10605.480-44A6126.80
lung, embryo E18.CNhs10583.1287-20I6128.07
lung, neonate N00.CNhs11224.640-42C6104.01
lung, neonate N06.CNhs11212.683-20E594.58
lung, neonate N07.CNhs11111.715-19A390.14
lung, neonate N10.CNhs11219.750-23E678.13
lung, neonate N20.CNhs11109.822-18A487.67
lung, neonate N25.CNhs11119.1359-25C779.95
lung, neonate N30.CNhs11133.1394-42H271.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1155.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1168.07
mammary gland, adult lactating day02.CNhs10480.595-22B6151.46
mammary gland, adult pregnant day19.CNhs10476.588-5H2174.67
medulla oblongata, adult.CNhs10477.17-12C274.66
medulla oblongata, neonate N30.CNhs11200.1396-42A367.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7269.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2186.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1168.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2156.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3137.01
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7159.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8153.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9123.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4158.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5148.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6153.77
olfactory brain, adult.CNhs10489.18-22I982.58
ovary, adult.CNhs10507.91-2I7130.87
ovary, embryo E18.CNhs11040.505-44H7191.78
ovary, neonate N00.CNhs11217.1299-22I4144.48
oviduct, adult pregnant day01.CNhs10500.988-6G6112.01
pancreas, adult.CNhs10486.34-16E4209.74
pancreas, embryo E14.CNhs11012.405-44F4259.78
pancreas, embryo E15.CNhs11042.1556-45F2251.53
pancreas, embryo E16.CNhs11003.460-26E5189.36
pancreas, embryo E17.CNhs10599.1558-45G3228.56
pancreas, embryo E18.CNhs10580.1535-43I7166.01
pancreas, neonate N00.CNhs11105.645-26G9154.28
pancreas, neonate N01.CNhs11138.1531-43D7159.95
pancreas, neonate N02.CNhs11139.1539-43D8137.96
pancreas, neonate N16.CNhs11136.787-43B6177.93
pancreas, neonate N25.CNhs11094.1555-45E2211.89
pancreas, neonate N30.CNhs11182.1548-44H5181.52
pituitary gland, adult.CNhs10493.21-1G874.22
pituitary gland, embryo E12.CNhs11018.346-16E6164.04
pituitary gland, embryo E13.CNhs11009.370-44C7201.28
pituitary gland, embryo E14.CNhs11037.398-44A5169.33
pituitary gland, embryo E15.CNhs10592.427-16B9145.06
pituitary gland, embryo E16.CNhs11036.449-43F6160.89
pituitary gland, embryo E17.CNhs11039.1265-44F5138.71
pituitary gland, neonate N00.CNhs11190.1308-22E9169.89
placenta, adult pregnant day10.CNhs10472.539-13I7176.47
placenta, adult pregnant day17.CNhs10464.577-18G3121.80
prostate, adult.CNhs10470.859-1F8153.93
skin, adult.CNhs10492.30-1C3134.38
skin, neonate N00.CNhs11124.650-25G4145.96
skin, neonate N03.CNhs11215.662-22H3128.95
skin, neonate N06.CNhs11097.693-20I5160.56
skin, neonate N10.CNhs11108.762-6C4136.24
small intestine, neonate N16.CNhs11114.790-21I1242.80
spinal cord, adult.CNhs10505.24-13C976.02
spleen, adult.CNhs10465.25-2G2207.10
spleen, embryo E16.CNhs11035.461-43C1181.41
spleen, embryo E18.CNhs11011.1271-21F2187.05
spleen, neonate N10.CNhs11116.752-24D1224.35
spleen, neonate N20.CNhs11112.824-19H1242.91
spleen, neonate N25.CNhs11099.1354-25G3204.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6149.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9157.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3165.56
stomach, adult.CNhs10503.33-1H6179.48
stomach, embryo E12.CNhs10588.356-43E3199.92
stomach, embryo E15.CNhs10603.1252-16G8161.84
stomach, embryo E16.CNhs11022.459-17D4160.39
stomach, embryo E17.CNhs11006.1035-18D5154.73
stomach, embryo E18.CNhs10999.1286-20C6151.11
stomach, neonate N03.CNhs11193.1340-24B8146.46
stomach, neonate N07.CNhs11210.718-18A9150.93
stomach, neonate N25.CNhs11104.1355-25E4160.72
stomach, neonate N30.CNhs11134.1386-42I1167.07
submandibular gland, adult.CNhs10469.59-29C1137.94
testis, adult.CNhs10504.57-7G5150.51
testis, embryo E13.CNhs11031.389-23F5167.31
testis, embryo E15.CNhs11034.443-27C5177.54
testis, embryo E16.CNhs11033.470-26G5137.28
testis, embryo E17.CNhs11029.486-18I5163.90
testis, embryo E18.CNhs11027.503-18G5143.95
testis, neonate N00.CNhs11189.1300-22B7139.54
testis, neonate N07.CNhs11222.726-26I4114.97
testis, neonate N10.CNhs11204.763-44D9129.50
testis, neonate N20.CNhs11110.839-18H3107.99
testis, neonate N30.CNhs11130.1391-42E298.51
thymus, adult.CNhs10471.38-12B5145.05
thymus, embryo E14.CNhs11041.402-44I4262.12
thymus, embryo E15.CNhs11005.430-45I2232.43
thymus, embryo E16.CNhs11002.456-26C5235.68
thymus, embryo E17.CNhs10581.478-18C1185.29
thymus, embryo E18.CNhs10595.1273-19G4170.87
thymus, neonate N02.CNhs11181.1541-43F8159.50
thymus, neonate N03.CNhs11137.2104-43C7143.85
thymus, neonate N06.CNhs11197.681-26C4131.66
thymus, neonate N07.CNhs11211.713-19D3134.89
thymus, neonate N10.CNhs11194.748-24E4127.95
thymus, neonate N20.CNhs11186.820-7A2131.76
thymus, neonate N25.CNhs11125.1362-25G7116.80
thymus, neonate N30.CNhs11132.1393-42G289.06
tongue, adult.CNhs10499.32-1B4179.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3318.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7368.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5273.15
urinary bladder, adult.CNhs10481.879-12E4102.78
uterus, adult pregnant day19.CNhs10497.590-15F5143.58
uterus, adult.CNhs10509.92-27E5119.60
vagina, adult.CNhs10502.89-27D5152.84
vesicular gland, adult.CNhs10491.51-27F8151.98
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1111.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A291.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3100.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D789.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A489.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A595.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A689.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A783.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A878.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A986.98
whole body, embryo E11.CNhs11014.324-5I8210.48
whole body, embryo E12.CNhs10587.857-27C9173.97
whole body, embryo E13.CNhs10512.372-23H2193.78
whole body, embryo E14.5.CNhs10578.420-27D2178.44
whole body, embryo E14.CNhs10519.395-14B1238.54
whole body, embryo E16.CNhs10514.453-14F2224.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5230.47
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5230.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5211.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5208.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5232.44
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5224.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5192.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5200.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5185.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5188.61
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5191.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5198.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5180.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5193.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5210.18
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5200.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5191.23
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5204.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5198.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5196.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5204.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5207.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5198.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5217.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5206.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5180.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5216.07
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5205.60
whole body, embryo E17.5.CNhs10513.490-9F9200.43
whole body, embryo E17.CNhs10517.475-3I5199.85
whole body, embryo E18.CNhs10516.493-3B3196.50
whole body, neonate N00.CNhs10525.657-19C2205.20
whole body, neonate N01.CNhs10576.659-23C6240.83
whole body, neonate N06.CNhs10515.692-21D1217.72
whole body, neonate N10.CNhs10518.761-6B4218.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
connective tissue cell2.85e-0946
mesenchymal cell2.85e-0946
motile cell4.83e-0954

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum5.97e-1123
sac5.97e-1123
liver8.82e-1122
epithelial sac8.82e-1122
digestive gland8.82e-1122
epithelium of foregut-midgut junction8.82e-1122
anatomical boundary8.82e-1122
hepatobiliary system8.82e-1122
foregut-midgut junction8.82e-1122
hepatic diverticulum8.82e-1122
liver primordium8.82e-1122
septum transversum8.82e-1122
liver bud8.82e-1122
connective tissue2.85e-0946
exocrine gland6.69e-0925
exocrine system6.69e-0925
abdomen element4.61e-0849
abdominal segment element4.61e-0849
abdominal segment of trunk4.61e-0849
abdomen4.61e-0849
epithelial tube7.00e-0847
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