FFCP PHASE1:Mm9::chr9:55937882..55937896,+: Difference between revisions
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|id=chr9:55937882..55937896,+
|short_description=p7@Pstpip1
|description=CAGE_peak_7_at_Pstpip1_5end
|association_with_transcript=99bp_to_ENSMUST00000138646,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19200 | |EntrezGene=19200 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=P97814 | |UniProt=P97814 | ||
|association_with_transcript=99bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |||
|cluster_id=chr9:55937882..55937896,+ | |||
|description=CAGE_peak_7_at_Pstpip1_5end | |||
|id=chr9:55937882..55937896,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.89e-08!32;CL:0002032!8.89e-08!32;CL:0000037!8.89e-08!32;CL:0000566!8.89e-08!32;CL:0000837!8.89e-08!32;CL:0000084!9.73e-07!11;CL:0000827!9.73e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.17e-08,32;CL:0002032,2.17e-08,32;CL:0000037,2.17e-08,32;CL:0000837,2.17e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.32e-09,3;DOID:4045,2.32e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-16!45;UBERON:0003061!1.07e-16!45;UBERON:0004177!9.25e-16!29;UBERON:0002193!7.10e-15!48;UBERON:0002405!1.65e-13!70;UBERON:0005057!1.51e-12!51;UBERON:0002370!4.53e-12!23;UBERON:0000974!4.53e-12!23;UBERON:0004807!4.53e-12!23;UBERON:0005058!4.53e-12!23;UBERON:0003351!4.53e-12!23;UBERON:0009113!4.53e-12!23;UBERON:0003295!4.53e-12!23;UBERON:0009722!4.53e-12!23;UBERON:0005562!4.53e-12!23;UBERON:0007690!4.53e-12!23;UBERON:0006562!2.83e-11!24;UBERON:0003408!2.83e-11!24;UBERON:0001557!2.83e-11!24;UBERON:0001042!2.83e-11!24;UBERON:0008814!2.83e-11!24;UBERON:0009145!2.83e-11!24;UBERON:0000072!2.80e-10!27;UBERON:0000063!5.58e-08!35;UBERON:0000065!6.82e-08!41;UBERON:0003081!8.53e-08!88;UBERON:0001004!1.60e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.27e-16,23;UBERON:0000974,1.27e-16,23;UBERON:0004807,1.27e-16,23;UBERON:0005058,1.27e-16,23;UBERON:0003351,1.27e-16,23;UBERON:0009113,1.27e-16,23;UBERON:0003295,1.27e-16,23;UBERON:0009722,1.27e-16,23;UBERON:0005562,1.27e-16,23;UBERON:0007690,1.27e-16,23;UBERON:0006562,8.27e-16,24;UBERON:0003408,8.27e-16,24;UBERON:0001557,8.27e-16,24;UBERON:0001042,8.27e-16,24;UBERON:0008814,8.27e-16,24;UBERON:0009145,8.27e-16,24;UBERON:0004177,1.56e-14,29;UBERON:0005057,1.56e-14,29;UBERON:0002390,2.21e-14,45;UBERON:0003061,2.21e-14,45;UBERON:0000072,9.93e-14,27;UBERON:0000077,2.97e-13,35;UBERON:0002193,3.17e-13,48;UBERON:0002405,3.17e-13,48;UBERON:0007811,1.39e-09,36;UBERON:0000065,4.47e-08,41;UBERON:0001004,8.09e-08,42;UBERON:0000490,8.37e-08,66;UBERON:0000153,1.42e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.281577444303333,0.468129052643987,0,0.0797721589953364,1.71200729931206,0.437102012094987,0.333109761815663,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.0850432901510698,1.19149141441062,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62622750694888,5.4693474116666,10.470474879476,10.5881667845583,8.19654581950135,13.1087795318411,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0.323533699894818,0.441683036920787,0,0,0,0,0,2.15667224110656,2.39961092397363,3.30382590389968,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,3.3455227924913,2.27330799516474,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0,0,1.08781136763742,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,1.40803024838226,0.63549621259146,0,0,0,0,0,0,0,0,0.512612642393558,1.03193433981611,0.555583582109135,0.376736914009382,0.27338845544205,0.915112692826091,3.0596117398894,2.09927178485487,1.65839968565309,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,5.05617793005085,0.405450430580328,0.924398614483445,1.29920822977795,2.68540043501222,4.96703386953162,3.12508168751919,3.69223817936443,4.74542314756294,3.58171991278499,4.94048307170519,5.26272555994663,3.94468550725351,3.97381467417334,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.281577444303333,0.468129052643987,0,0.0797721589953364,1.71200729931206,0.437102012094987,0.333109761815663,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.0850432901510698,1.19149141441062,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62622750694888,5.4693474116666,10.470474879476,10.5881667845583,8.19654581950135,13.1087795318411,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0.323533699894818,0.441683036920787,0,0,0,0,0,2.15667224110656,2.39961092397363,3.30382590389968,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,3.3455227924913,2.27330799516474,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0,0,1.08781136763742,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,1.40803024838226,0.63549621259146,0,0,0,0,0,0,0,0,0.512612642393558,1.03193433981611,0.555583582109135,0.376736914009382,0.27338845544205,0.915112692826091,3.0596117398894,2.09927178485487,1.65839968565309,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,5.05617793005085,0.405450430580328,0.924398614483445,1.29920822977795,2.68540043501222,4.96703386953162,3.12508168751919,3.69223817936443,4.74542314756294,3.58171991278499,4.94048307170519,5.26272555994663,3.94468550725351,3.97381467417334,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p7@Pstpip1 | |||
}} | }} |
Latest revision as of 20:59, 26 September 2015
Short description: | p7@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pstpip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 99bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.17e-08 | 32 |
hematopoietic stem cell | 2.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.17e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.27e-16 | 23 |
neck | 1.27e-16 | 23 |
respiratory system epithelium | 1.27e-16 | 23 |
hemolymphoid system gland | 1.27e-16 | 23 |
pharyngeal epithelium | 1.27e-16 | 23 |
thymic region | 1.27e-16 | 23 |
pharyngeal gland | 1.27e-16 | 23 |
entire pharyngeal arch endoderm | 1.27e-16 | 23 |
thymus primordium | 1.27e-16 | 23 |
early pharyngeal endoderm | 1.27e-16 | 23 |
pharynx | 8.27e-16 | 24 |
gland of gut | 8.27e-16 | 24 |
upper respiratory tract | 8.27e-16 | 24 |
chordate pharynx | 8.27e-16 | 24 |
pharyngeal arch system | 8.27e-16 | 24 |
pharyngeal region of foregut | 8.27e-16 | 24 |
hemopoietic organ | 1.56e-14 | 29 |
immune organ | 1.56e-14 | 29 |
hematopoietic system | 2.21e-14 | 45 |
blood island | 2.21e-14 | 45 |
segment of respiratory tract | 9.93e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 2.97e-13 | 35 |
hemolymphoid system | 3.17e-13 | 48 |
immune system | 3.17e-13 | 48 |
craniocervical region | 1.39e-09 | 36 |
respiratory tract | 4.47e-08 | 41 |
respiratory system | 8.09e-08 | 42 |
unilaminar epithelium | 8.37e-08 | 66 |
anterior region of body | 1.42e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.32e-09 | 3 |
muscle cancer | 2.32e-09 | 3 |