FFCP PHASE1:Mm9::chr1:182781262..182781303,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:182781262..182781303,+
|short_description=p1@BC031781
|description=CAGE_peak_1_at_BC031781_5end
|association_with_transcript=0bp_to_ENSMUST00000038091,NM_1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=208768 | |EntrezGene=208768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=318 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1J5 | |UniProt=Q8K1J5 | ||
|association_with_transcript=0bp_to_ENSMUST00000038091,NM_145943,uc007dwt.1_5end | |||
|cluster_id=chr1:182781262..182781303,+ | |||
|description=CAGE_peak_1_at_BC031781_5end | |||
|id=chr1:182781262..182781303,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.43e-12!32;CL:0002032!7.43e-12!32;CL:0000037!7.43e-12!32;CL:0000566!7.43e-12!32;CL:0000837!7.43e-12!32;CL:0000144!5.60e-09!121;CL:0000012!5.60e-09!121;CL:0000034!1.32e-08!97;CL:0002031!1.62e-08!25;CL:0000838!4.09e-08!12;CL:0000063!4.75e-08!66;CL:0000542!6.37e-08!13;CL:0000051!6.37e-08!13;CL:0002371!1.06e-07!118;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.43e-12,32;CL:0002032,7.43e-12,32;CL:0000037,7.43e-12,32;CL:0000837,7.43e-12,32;CL:0000034,1.32e-08,97;CL:0002031,1.62e-08,25;CL:0000838,4.09e-08,12;CL:0000542,6.37e-08,13;CL:0000051,6.37e-08,13;CL:0000084,1.89e-07,11;CL:0000827,1.89e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.41e-09!29;UBERON:0002390!5.60e-08!45;UBERON:0003061!5.60e-08!45;UBERON:0002193!9.20e-08!48;UBERON:0002370!3.32e-07!23;UBERON:0000974!3.32e-07!23;UBERON:0004807!3.32e-07!23;UBERON:0005058!3.32e-07!23;UBERON:0003351!3.32e-07!23;UBERON:0009113!3.32e-07!23;UBERON:0003295!3.32e-07!23;UBERON:0009722!3.32e-07!23;UBERON:0005562!3.32e-07!23;UBERON:0007690!3.32e-07!23;UBERON:0006562!3.49e-07!24;UBERON:0001557!3.49e-07!24;UBERON:0001042!3.49e-07!24;UBERON:0008814!3.49e-07!24;UBERON:0009145!3.49e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.41e-09,29;UBERON:0005057,4.41e-09,29;UBERON:0000077,5.34e-08,35;UBERON:0002390,5.60e-08,45;UBERON:0003061,5.60e-08,45;UBERON:0002193,9.20e-08,48;UBERON:0002405,9.20e-08,48;UBERON:0002370,3.32e-07,23;UBERON:0000974,3.32e-07,23;UBERON:0004807,3.32e-07,23;UBERON:0005058,3.32e-07,23;UBERON:0003351,3.32e-07,23;UBERON:0009113,3.32e-07,23;UBERON:0003295,3.32e-07,23;UBERON:0009722,3.32e-07,23;UBERON:0005562,3.32e-07,23;UBERON:0007690,3.32e-07,23;UBERON:0006562,3.49e-07,24;UBERON:0001557,3.49e-07,24;UBERON:0001042,3.49e-07,24;UBERON:0008814,3.49e-07,24;UBERON:0009145,3.49e-07,24 | |||
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| ||
|short_description=p1@BC031781 | |||
}} | }} |
Latest revision as of 22:21, 26 September 2015
Short description: | p1@BC031781 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC031781_5end |
Coexpression cluster: | MCL_coexpression_mm9:318 |
Association with transcript: | 0bp_to_ENSMUST00000038091, NM_145943, uc007dwt.1_5end |
EntrezGene: | BC031781 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.43e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.43e-12 | 32 |
hematopoietic stem cell | 7.43e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.43e-12 | 32 |
stem cell | 1.32e-08 | 97 |
hematopoietic lineage restricted progenitor cell | 1.62e-08 | 25 |
lymphoid lineage restricted progenitor cell | 4.09e-08 | 12 |
lymphocyte | 6.37e-08 | 13 |
common lymphoid progenitor | 6.37e-08 | 13 |
T cell | 1.89e-07 | 11 |
pro-T cell | 1.89e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.41e-09 | 29 |
immune organ | 4.41e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.34e-08 | 35 |
hematopoietic system | 5.60e-08 | 45 |
blood island | 5.60e-08 | 45 |
hemolymphoid system | 9.20e-08 | 48 |
immune system | 9.20e-08 | 48 |
thymus | 3.32e-07 | 23 |
neck | 3.32e-07 | 23 |
respiratory system epithelium | 3.32e-07 | 23 |
hemolymphoid system gland | 3.32e-07 | 23 |
pharyngeal epithelium | 3.32e-07 | 23 |
thymic region | 3.32e-07 | 23 |
pharyngeal gland | 3.32e-07 | 23 |
entire pharyngeal arch endoderm | 3.32e-07 | 23 |
thymus primordium | 3.32e-07 | 23 |
early pharyngeal endoderm | 3.32e-07 | 23 |
pharynx | 3.49e-07 | 24 |
upper respiratory tract | 3.49e-07 | 24 |
chordate pharynx | 3.49e-07 | 24 |
pharyngeal arch system | 3.49e-07 | 24 |
pharyngeal region of foregut | 3.49e-07 | 24 |