FFCP PHASE1:Mm9::chr7:75419993..75420006,-: Difference between revisions
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{{FFCP|EntrezGene=100504026|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000135564,NR_040341,uc009hje.1_5end|description=CAGE_peak_1_at_Gm16157_5end|id=chr7:75419993..75420006,-|ontology_enrichment_celltype=CL:0000181!2.21e-11!5;CL:0000417!2.21e-11!5;CL:0000668!2.21e-11!5;CL:0000412!2.21e-11!5;CL:0000182!2.21e-11!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.28e-20,5;CL:0000057,4.65e-08,1;CL:0000632,4.65e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.59e-28!22;UBERON:0007499!5.59e-28!22;UBERON:0006925!5.59e-28!22;UBERON:0009497!5.59e-28!22;UBERON:0000015!5.59e-28!22;UBERON:0002423!5.59e-28!22;UBERON:0006235!5.59e-28!22;UBERON:0008835!5.59e-28!22;UBERON:0003894!5.59e-28!22;UBERON:0004161!5.59e-28!22;UBERON:0008836!5.59e-28!22;UBERON:0005057!5.79e-27!51;UBERON:0009854!1.23e-26!23;UBERON:0009856!1.23e-26!23;UBERON:0002365!2.83e-24!25;UBERON:0002330!2.83e-24!25;UBERON:0003929!2.49e-22!55;UBERON:0002368!4.02e-20!60;UBERON:0002405!1.75e-18!70;UBERON:0002530!2.97e-18!65;UBERON:0000490!6.49e-18!66;UBERON:0005911!5.93e-17!69;UBERON:0000949!4.51e-16!72;UBERON:0001041!1.83e-14!92;UBERON:0000077!1.73e-13!97;UBERON:0005172!1.16e-12!49;UBERON:0005173!1.16e-12!49;UBERON:0002417!1.16e-12!49;UBERON:0000916!1.16e-12!49;UBERON:0003914!1.50e-11!47;UBERON:0005256!1.50e-11!47;UBERON:0004921!2.42e-09!126;UBERON:0004185!2.42e-09!126;UBERON:0001007!3.99e-09!128;UBERON:0001555!3.99e-09!128;UBERON:0007026!3.99e-09!128;UBERON:0004119!6.47e-09!130;UBERON:0000925!6.47e-09!130;UBERON:0006595!6.47e-09!130;UBERON:0003104!8.20e-09!131;UBERON:0009142!8.20e-09!131;UBERON:0009569!1.33e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-40,22;UBERON:0007499,3.30e-40,22;UBERON:0006925,3.30e-40,22;UBERON:0009497,3.30e-40,22;UBERON:0000015,3.30e-40,22;UBERON:0002423,3.30e-40,22;UBERON:0006235,3.30e-40,22;UBERON:0008835,3.30e-40,22;UBERON:0003894,3.30e-40,22;UBERON:0004161,3.30e-40,22;UBERON:0008836,3.30e-40,22;UBERON:0009854,2.06e-38,23;UBERON:0009856,2.06e-38,23;UBERON:0002365,2.97e-35,25;UBERON:0002330,2.97e-35,25;UBERON:0005256,4.57e-19,45;UBERON:0003914,3.35e-18,47;UBERON:0005172,2.08e-17,49;UBERON:0005173,2.08e-17,49;UBERON:0002417,2.08e-17,49;UBERON:0000916,2.08e-17,49;UBERON:0003929,2.27e-15,55;UBERON:0002368,5.58e-14,60;UBERON:0003104,9.93e-14,61;UBERON:0009142,9.93e-14,61;UBERON:0002530,8.39e-13,65;UBERON:0000490,1.37e-12,66;UBERON:0009569,1.37e-12,66;UBERON:0005911,5.55e-12,69;UBERON:0000949,2.00e-11,72;UBERON:0005177,2.73e-10,79;UBERON:0001041,3.82e-10,80;UBERON:0002100,7.36e-09,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,1.3599426674155,2.15881276655127,9.09686984426737,6.2723764193627,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,2.23284568601102,2.18426371180192,1.51547326768267,3.76734568396016,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p1@Gm16157}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504026 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000135564,NR_040341,uc009hje.1_5end | |||
|cluster_id=chr7:75419993..75420006,- | |||
|description=CAGE_peak_1_at_Gm16157_5end | |||
|id=chr7:75419993..75420006,- | |||
|ontology_enrichment_celltype=CL:0000181!2.21e-11!5;CL:0000417!2.21e-11!5;CL:0000668!2.21e-11!5;CL:0000412!2.21e-11!5;CL:0000182!2.21e-11!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.28e-20,5;CL:0000057,4.65e-08,1;CL:0000632,4.65e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.59e-28!22;UBERON:0007499!5.59e-28!22;UBERON:0006925!5.59e-28!22;UBERON:0009497!5.59e-28!22;UBERON:0000015!5.59e-28!22;UBERON:0002423!5.59e-28!22;UBERON:0006235!5.59e-28!22;UBERON:0008835!5.59e-28!22;UBERON:0003894!5.59e-28!22;UBERON:0004161!5.59e-28!22;UBERON:0008836!5.59e-28!22;UBERON:0005057!5.79e-27!51;UBERON:0009854!1.23e-26!23;UBERON:0009856!1.23e-26!23;UBERON:0002365!2.83e-24!25;UBERON:0002330!2.83e-24!25;UBERON:0003929!2.49e-22!55;UBERON:0002368!4.02e-20!60;UBERON:0002405!1.75e-18!70;UBERON:0002530!2.97e-18!65;UBERON:0000490!6.49e-18!66;UBERON:0005911!5.93e-17!69;UBERON:0000949!4.51e-16!72;UBERON:0001041!1.83e-14!92;UBERON:0000077!1.73e-13!97;UBERON:0005172!1.16e-12!49;UBERON:0005173!1.16e-12!49;UBERON:0002417!1.16e-12!49;UBERON:0000916!1.16e-12!49;UBERON:0003914!1.50e-11!47;UBERON:0005256!1.50e-11!47;UBERON:0004921!2.42e-09!126;UBERON:0004185!2.42e-09!126;UBERON:0001007!3.99e-09!128;UBERON:0001555!3.99e-09!128;UBERON:0007026!3.99e-09!128;UBERON:0004119!6.47e-09!130;UBERON:0000925!6.47e-09!130;UBERON:0006595!6.47e-09!130;UBERON:0003104!8.20e-09!131;UBERON:0009142!8.20e-09!131;UBERON:0009569!1.33e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-40,22;UBERON:0007499,3.30e-40,22;UBERON:0006925,3.30e-40,22;UBERON:0009497,3.30e-40,22;UBERON:0000015,3.30e-40,22;UBERON:0002423,3.30e-40,22;UBERON:0006235,3.30e-40,22;UBERON:0008835,3.30e-40,22;UBERON:0003894,3.30e-40,22;UBERON:0004161,3.30e-40,22;UBERON:0008836,3.30e-40,22;UBERON:0009854,2.06e-38,23;UBERON:0009856,2.06e-38,23;UBERON:0002365,2.97e-35,25;UBERON:0002330,2.97e-35,25;UBERON:0005256,4.57e-19,45;UBERON:0003914,3.35e-18,47;UBERON:0005172,2.08e-17,49;UBERON:0005173,2.08e-17,49;UBERON:0002417,2.08e-17,49;UBERON:0000916,2.08e-17,49;UBERON:0003929,2.27e-15,55;UBERON:0002368,5.58e-14,60;UBERON:0003104,9.93e-14,61;UBERON:0009142,9.93e-14,61;UBERON:0002530,8.39e-13,65;UBERON:0000490,1.37e-12,66;UBERON:0009569,1.37e-12,66;UBERON:0005911,5.55e-12,69;UBERON:0000949,2.00e-11,72;UBERON:0005177,2.73e-10,79;UBERON:0001041,3.82e-10,80;UBERON:0002100,7.36e-09,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,1.3599426674155,2.15881276655127,9.09686984426737,6.2723764193627,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85388415213294,0,0,0,0,0,0,0,0.486405680325106,0.823684239564244,1.43768206527355,2.23284568601102,2.18426371180192,1.51547326768267,3.76734568396016,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39736270956253,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@Gm16157 | |||
}} |
Latest revision as of 01:24, 27 September 2015
Short description: | p1@Gm16157 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm16157_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -9bp_to_ENSMUST00000135564, NR_040341, uc009hje.1_5end |
EntrezGene: | Gm16157 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.28e-20 | 5 |
fibroblast | 4.65e-08 | 1 |
hepatic stellate cell | 4.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 3.30e-40 | 22 |
epithelial sac | 3.30e-40 | 22 |
digestive gland | 3.30e-40 | 22 |
epithelium of foregut-midgut junction | 3.30e-40 | 22 |
anatomical boundary | 3.30e-40 | 22 |
hepatobiliary system | 3.30e-40 | 22 |
foregut-midgut junction | 3.30e-40 | 22 |
hepatic diverticulum | 3.30e-40 | 22 |
liver primordium | 3.30e-40 | 22 |
septum transversum | 3.30e-40 | 22 |
liver bud | 3.30e-40 | 22 |
digestive tract diverticulum | 2.06e-38 | 23 |
sac | 2.06e-38 | 23 |
exocrine gland | 2.97e-35 | 25 |
exocrine system | 2.97e-35 | 25 |
trunk mesenchyme | 4.57e-19 | 45 |
epithelial tube | 3.35e-18 | 47 |
abdomen element | 2.08e-17 | 49 |
abdominal segment element | 2.08e-17 | 49 |
abdominal segment of trunk | 2.08e-17 | 49 |
abdomen | 2.08e-17 | 49 |
gut epithelium | 2.27e-15 | 55 |
endocrine gland | 5.58e-14 | 60 |
mesenchyme | 9.93e-14 | 61 |
entire embryonic mesenchyme | 9.93e-14 | 61 |
gland | 8.39e-13 | 65 |
unilaminar epithelium | 1.37e-12 | 66 |
subdivision of trunk | 1.37e-12 | 66 |
endo-epithelium | 5.55e-12 | 69 |
endocrine system | 2.00e-11 | 72 |
trunk region element | 2.73e-10 | 79 |
foregut | 3.82e-10 | 80 |
trunk | 7.36e-09 | 90 |