FFCP PHASE2:Mm9::chr9:89804372..89804444,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:19417 |HGNC= |MCL_coexpression_id=20 |TSSclassifier=NA |UniProt=uniprot:Q9QZR7,uniprot:P27671,uniprot:B2RS27 |assoc...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=19417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |MCL_coexpression_id=20 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q9QZR7,P27671,B2RS27 | ||
|association_with_transcript=-168bp_to_ENSMUST00000034909,ENSMUST00000034912,NM_001039655,NM_011245,uc009qzr.1,uc009qzs.1,uc009qzt.1_5end | |association_with_transcript=-168bp_to_ENSMUST00000034909,ENSMUST00000034912,NM_001039655,NM_011245,uc009qzr.1,uc009qzs.1,uc009qzt.1_5end | ||
|cluster_id=chr9:89804372..89804444,+ | |cluster_id=chr9:89804372..89804444,+ | ||
Latest revision as of 05:58, 27 September 2015
| Short description: | p2@Rasgrf1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rasgrf1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:20 |
| Association with transcript: | -168bp_to_ENSMUST00000034909, ENSMUST00000034912, NM_001039655, NM_011245, uc009qzr.1, uc009qzs.1, uc009qzt.1_5end |
| EntrezGene: | Rasgrf1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Rasgrf1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 5.59e-10 | 23 |
| neuroblast (sensu Vertebrata) | 5.59e-10 | 23 |
| raphe nuclei neuron | 1.08e-08 | 3 |
| neuron of the substantia nigra | 6.97e-08 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.08e-40 | 54 |
| neural tube | 2.04e-36 | 52 |
| neural rod | 2.04e-36 | 52 |
| future spinal cord | 2.04e-36 | 52 |
| neural keel | 2.04e-36 | 52 |
| central nervous system | 1.22e-32 | 73 |
| nervous system | 1.44e-31 | 75 |
| neurectoderm | 2.74e-30 | 64 |
| neural plate | 2.74e-30 | 64 |
| presumptive neural plate | 2.74e-30 | 64 |
Showing 1 to 10 of 67 entries
