FFCP PHASE1:Mm9::chr15:97998732..97998747,+: Difference between revisions
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|id=chr15:97998732..97998747,+
|short_description=p2@AI836003
|description=CAGE_peak_2_at_AI836003_5end
|association_with_transcript=495bp_to_ENSMUST00000031914,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=239650 | |EntrezGene=239650 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3026 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMK5 | |UniProt=Q8BMK5 | ||
|association_with_transcript=495bp_to_ENSMUST00000031914,NM_177716,uc011zys.1_5end | |||
|cluster_id=chr15:97998732..97998747,+ | |||
|description=CAGE_peak_2_at_AI836003_5end | |||
|id=chr15:97998732..97998747,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-16,23;CL:0000337,1.65e-16,23;CL:0000540,2.60e-10,33;CL:0000047,2.60e-10,33;CL:0000031,2.60e-10,33;CL:0000404,2.60e-10,33;CL:0000393,3.79e-08,39;CL:0000211,3.79e-08,39;CL:0000682,1.85e-07,3;CL:0000349,4.24e-07,3;CL:0000351,4.24e-07,3;CL:0002319,4.73e-07,43;CL:0000221,8.24e-07,44;CL:0000133,8.24e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.52e-08!75;UBERON:0001016!7.52e-08!75;UBERON:0001017!1.87e-07!73;UBERON:0005743!1.87e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.03e-11,6;UBERON:0005174,7.03e-11,6;UBERON:0001137,7.03e-11,6;UBERON:0000073,8.51e-11,54;UBERON:0001017,3.47e-10,73;UBERON:0001016,9.51e-10,75;UBERON:0001948,2.93e-09,5;UBERON:0002315,2.93e-09,5;UBERON:0003076,5.76e-09,12;UBERON:0003057,5.76e-09,12;UBERON:0001049,7.31e-09,52;UBERON:0005068,7.31e-09,52;UBERON:0006241,7.31e-09,52;UBERON:0007135,7.31e-09,52;UBERON:0002950,8.10e-08,4;UBERON:0001891,8.10e-08,4;UBERON:0009616,8.10e-08,4;UBERON:0010286,8.10e-08,4;UBERON:0000358,4.24e-07,3;UBERON:0000307,4.24e-07,3;UBERON:0007010,4.24e-07,3;UBERON:0002020,5.60e-07,34 | |||
|phase1_expression=0,7.67745896806594,12.739978702907,0,0,3.86122325397347,7.00837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.595303031057488,0,0,4.7997726838022,7.11168771308227,10.3361753540704,12.9228598847722,19.1769397090441,0.190023419456374,0,10.4213340007993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.878744730937887,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,5.14171771926846,3.53389665522582,0,0,0,4.40463523997555,3.06449611404451,3.99376986466233,1.05509030184155,0.914876436024097,1.04182674111352,3.90856198601933,2.8138130501584,3.36156145108982,1.76777151284201,2.27794689278565,1.4911955666024,0.984440513331393,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,1.49790639404823,0.457500602818626,0,0.869121600961382,0.767146371990992,2.90903262383384,1.29793010454206,0,0.497627882440372,0,0.210441855886474,0,0,0,0.452114453507145,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,0.658239399653922,0.820837320395476,1.29710095273369,1.75439984910399,0,0.805238512562231,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.456994050438915,0,0.814605311381257,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.491589944147214,2.41758974612254,2.89298117163023,0,0,0,0,4.33486592967038,3.04750385139728,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0,0.162886959353576,2.3095817216155,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0,2.11204537257339,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,6.88156455459601,3.85769583420746,27.868846316437,2.12508553435409,1.12609485270709,0.915758121336325,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.565879024158229,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,1.23625770240992,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,7.67745896806594,12.739978702907,0,0,3.86122325397347,7.00837921786577,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.595303031057488,0,0,4.7997726838022,7.11168771308227,10.3361753540704,12.9228598847722,19.1769397090441,0.190023419456374,0,10.4213340007993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.878744730937887,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0.338844532069132,0,0.899899717281399,0,0,0,0.384218305321555,0,0,0,5.14171771926846,3.53389665522582,0,0,0,4.40463523997555,3.06449611404451,3.99376986466233,1.05509030184155,0.914876436024097,1.04182674111352,3.90856198601933,2.8138130501584,3.36156145108982,1.76777151284201,2.27794689278565,1.4911955666024,0.984440513331393,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,1.49790639404823,0.457500602818626,0,0.869121600961382,0.767146371990992,2.90903262383384,1.29793010454206,0,0.497627882440372,0,0.210441855886474,0,0,0,0.452114453507145,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,0.658239399653922,0.820837320395476,1.29710095273369,1.75439984910399,0,0.805238512562231,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.456994050438915,0,0.814605311381257,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0.167506257441816,0,0,0,0,0.318909537314974,0.491589944147214,2.41758974612254,2.89298117163023,0,0,0,0,4.33486592967038,3.04750385139728,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0,0.162886959353576,2.3095817216155,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0,2.11204537257339,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,6.88156455459601,3.85769583420746,27.868846316437,2.12508553435409,1.12609485270709,0.915758121336325,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.565879024158229,0.0936415074698824,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,1.23625770240992,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@AI836003 | |||
}} | }} |
Latest revision as of 12:58, 1 October 2015
Short description: | p2@AI836003 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AI836003_5end |
Coexpression cluster: | MCL_coexpression_mm9:3026 |
Association with transcript: | 495bp_to_ENSMUST00000031914, NM_177716, uc011zys.1_5end |
EntrezGene: | AI836003 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.65e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-16 | 23 |
neuron | 2.60e-10 | 33 |
neuronal stem cell | 2.60e-10 | 33 |
neuroblast | 2.60e-10 | 33 |
electrically signaling cell | 2.60e-10 | 33 |
electrically responsive cell | 3.79e-08 | 39 |
electrically active cell | 3.79e-08 | 39 |
M cell of gut | 1.85e-07 | 3 |
extraembryonic cell | 4.24e-07 | 3 |
trophoblast cell | 4.24e-07 | 3 |
neural cell | 4.73e-07 | 43 |
ectodermal cell | 8.24e-07 | 44 |
neurectodermal cell | 8.24e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.03e-11 | 6 |
dorsal region element | 7.03e-11 | 6 |
dorsum | 7.03e-11 | 6 |
regional part of nervous system | 8.51e-11 | 54 |
central nervous system | 3.47e-10 | 73 |
nervous system | 9.51e-10 | 75 |
regional part of spinal cord | 2.93e-09 | 5 |
gray matter of spinal cord | 2.93e-09 | 5 |
posterior neural tube | 5.76e-09 | 12 |
chordal neural plate | 5.76e-09 | 12 |
neural tube | 7.31e-09 | 52 |
neural rod | 7.31e-09 | 52 |
future spinal cord | 7.31e-09 | 52 |
neural keel | 7.31e-09 | 52 |
regional part of midbrain | 8.10e-08 | 4 |
midbrain | 8.10e-08 | 4 |
presumptive midbrain | 8.10e-08 | 4 |
midbrain neural tube | 8.10e-08 | 4 |
blastocyst | 4.24e-07 | 3 |
blastula | 4.24e-07 | 3 |
cleaving embryo | 4.24e-07 | 3 |
gray matter | 5.60e-07 | 34 |