Personal tools

FFCP PHASE1:Mm9::chr3:122433031..122433037,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=242202|HGNC=|MCL_coexpression_id=3389|UniProt=Q8BJ62|association_with_transcript=-102bp_to_ENSMUST00000073213,uc008reu.1_5end|description=CAGE_peak_14_at_Pde5a_5end|id=chr3:122433031..122433037,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.42e-09,9;CL:0002251,4.42e-09,9;CL:0002250,6.06e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.48e-10!59;UBERON:0002048!4.12e-10!14;UBERON:0000117!4.12e-10!14;UBERON:0000171!4.12e-10!14;UBERON:0000170!4.12e-10!14;UBERON:0005597!4.12e-10!14;UBERON:0000118!4.12e-10!14;UBERON:0000160!3.25e-08!43;UBERON:0000344!6.41e-08!15;UBERON:0005178!9.24e-08!17;UBERON:0005181!9.24e-08!17;UBERON:0002224!9.24e-08!17;UBERON:0000915!9.24e-08!17;UBERON:0008947!9.24e-08!17;UBERON:0003258!9.24e-08!17;UBERON:0005157!1.18e-07!27;UBERON:0001242!4.14e-07!13;UBERON:0000060!4.14e-07!13;UBERON:0001262!4.14e-07!13;UBERON:0004786!4.14e-07!13;UBERON:0005153!4.87e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.98e-24,14;UBERON:0000117,7.98e-24,14;UBERON:0000171,7.98e-24,14;UBERON:0000170,7.98e-24,14;UBERON:0005597,7.98e-24,14;UBERON:0000118,7.98e-24,14;UBERON:0005153,3.77e-19,17;UBERON:0005178,3.77e-19,17;UBERON:0005181,3.77e-19,17;UBERON:0002224,3.77e-19,17;UBERON:0000915,3.77e-19,17;UBERON:0008947,3.77e-19,17;UBERON:0003258,3.77e-19,17;UBERON:0005157,7.01e-16,20;UBERON:0004921,4.94e-15,114;UBERON:0001007,1.17e-14,116;UBERON:0001555,1.17e-14,116;UBERON:0007026,1.17e-14,116;UBERON:0004119,2.70e-14,118;UBERON:0000925,2.70e-14,118;UBERON:0006595,2.70e-14,118;UBERON:0005409,1.36e-11,47;UBERON:0000310,3.78e-10,6;UBERON:0001443,3.78e-10,6;UBERON:0003350,4.42e-09,9;UBERON:0004808,4.42e-09,9;UBERON:0001277,4.42e-09,9;UBERON:0000160,9.18e-09,31;UBERON:0005911,9.90e-09,69;UBERON:0001242,2.98e-08,13;UBERON:0001262,2.98e-08,13;UBERON:0004786,2.98e-08,13;UBERON:0011216,1.55e-07,194;UBERON:0000485,2.60e-07,11;UBERON:0000344,5.07e-07,15|phase1_expression=0.960893082628764,1.04692622291808,1.36499771816861,0.30246421130683,1.50268718983904,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.799962113967033,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.52018735565099,0.756090389279792,0.443461021310609,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.34255163915718,0,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,1.05829836422134,0.376999773989026,0.247194967734374,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.81471491080253,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.768682321709099,0.655912071918102,0.258703370739016,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.492502392237286,0.56748166682099,0.584799949701329,0,0.268412837520744,0.210289948564127,0.205809224758569,0.330418782983798,1.32225283331772,0,0,0.77320476793256,0.80673409849337,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.596869416123452,1.16978452271472,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.49095073923223,0.632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,1.47802552133284,0.37898282354097,1.62964976442026,1.18821560042632,1.17345124144251,1.67506257441816,1.42826184531608,1.17080188714679,2.99506773801763,3.10050565508285,3.82691444777969,0.983179888294428,1.72684981865896,1.15719246865209,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,1.58115111178609,0,0.425820255624806,0.35613120733451,0.81443479676788,1.15479086080775,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.532020700926821,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,1.82987520414164,1.94409613479242,1.67270636811575,0.87345025498471,2.15782954215713,2.81021749466142,0.523511883968059,0.648074866458964,0,0,0,0.827292452285488,0.972255941720238,0.774958940866387,0.506868376472335,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0.221985953374065,0.0897138566094757,0,3.28422309854724,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0.565879024158229,0.37456602987953,0.512201219238954,0.402048282689293,0.952587382566147,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0,0.789209134313529,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p14@Pde5a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242202
|HGNC=
|MCL_coexpression_id=3389
|TSSclassifier=NA
|UniProt=Q8BJ62
|association_with_transcript=-102bp_to_ENSMUST00000073213,uc008reu.1_5end
|cluster_id=chr3:122433031..122433037,+
|description=CAGE_peak_14_at_Pde5a_5end
|id=chr3:122433031..122433037,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,4.42e-09,9;CL:0002251,4.42e-09,9;CL:0002250,6.06e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.48e-10!59;UBERON:0002048!4.12e-10!14;UBERON:0000117!4.12e-10!14;UBERON:0000171!4.12e-10!14;UBERON:0000170!4.12e-10!14;UBERON:0005597!4.12e-10!14;UBERON:0000118!4.12e-10!14;UBERON:0000160!3.25e-08!43;UBERON:0000344!6.41e-08!15;UBERON:0005178!9.24e-08!17;UBERON:0005181!9.24e-08!17;UBERON:0002224!9.24e-08!17;UBERON:0000915!9.24e-08!17;UBERON:0008947!9.24e-08!17;UBERON:0003258!9.24e-08!17;UBERON:0005157!1.18e-07!27;UBERON:0001242!4.14e-07!13;UBERON:0000060!4.14e-07!13;UBERON:0001262!4.14e-07!13;UBERON:0004786!4.14e-07!13;UBERON:0005153!4.87e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.98e-24,14;UBERON:0000117,7.98e-24,14;UBERON:0000171,7.98e-24,14;UBERON:0000170,7.98e-24,14;UBERON:0005597,7.98e-24,14;UBERON:0000118,7.98e-24,14;UBERON:0005153,3.77e-19,17;UBERON:0005178,3.77e-19,17;UBERON:0005181,3.77e-19,17;UBERON:0002224,3.77e-19,17;UBERON:0000915,3.77e-19,17;UBERON:0008947,3.77e-19,17;UBERON:0003258,3.77e-19,17;UBERON:0005157,7.01e-16,20;UBERON:0004921,4.94e-15,114;UBERON:0001007,1.17e-14,116;UBERON:0001555,1.17e-14,116;UBERON:0007026,1.17e-14,116;UBERON:0004119,2.70e-14,118;UBERON:0000925,2.70e-14,118;UBERON:0006595,2.70e-14,118;UBERON:0005409,1.36e-11,47;UBERON:0000310,3.78e-10,6;UBERON:0001443,3.78e-10,6;UBERON:0003350,4.42e-09,9;UBERON:0004808,4.42e-09,9;UBERON:0001277,4.42e-09,9;UBERON:0000160,9.18e-09,31;UBERON:0005911,9.90e-09,69;UBERON:0001242,2.98e-08,13;UBERON:0001262,2.98e-08,13;UBERON:0004786,2.98e-08,13;UBERON:0011216,1.55e-07,194;UBERON:0000485,2.60e-07,11;UBERON:0000344,5.07e-07,15
|phase1_expression=0.960893082628764,1.04692622291808,1.36499771816861,0.30246421130683,1.50268718983904,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.799962113967033,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.52018735565099,0.756090389279792,0.443461021310609,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.34255163915718,0,1.03909497345377,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,1.05829836422134,0.376999773989026,0.247194967734374,0.722996784599558,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.81471491080253,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.768682321709099,0.655912071918102,0.258703370739016,0,0,0.351902248327898,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.492502392237286,0.56748166682099,0.584799949701329,0,0.268412837520744,0.210289948564127,0.205809224758569,0.330418782983798,1.32225283331772,0,0,0.77320476793256,0.80673409849337,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.596869416123452,1.16978452271472,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.49095073923223,0.632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0,0,0,1.47802552133284,0.37898282354097,1.62964976442026,1.18821560042632,1.17345124144251,1.67506257441816,1.42826184531608,1.17080188714679,2.99506773801763,3.10050565508285,3.82691444777969,0.983179888294428,1.72684981865896,1.15719246865209,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,1.58115111178609,0,0.425820255624806,0.35613120733451,0.81443479676788,1.15479086080775,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0.532020700926821,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0.474503990371703,1.82987520414164,1.94409613479242,1.67270636811575,0.87345025498471,2.15782954215713,2.81021749466142,0.523511883968059,0.648074866458964,0,0,0,0.827292452285488,0.972255941720238,0.774958940866387,0.506868376472335,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0.221985953374065,0.0897138566094757,0,3.28422309854724,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0.565879024158229,0.37456602987953,0.512201219238954,0.402048282689293,0.952587382566147,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0,0.789209134313529,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.233931608445408,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p14@Pde5a
}}

Latest revision as of 13:21, 1 October 2015

Short description:p14@Pde5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_14_at_Pde5a_5end
Coexpression cluster:MCL_coexpression_mm9:3389
Association with transcript: -102bp_to_ENSMUST00000073213, uc008reu.1_5end
EntrezGene:Pde5a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p14@Pde5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell4.42e-099
epithelial cell of alimentary canal4.42e-099
intestinal crypt stem cell6.06e-083

Uber anatomy
Ontology termp-valuen
lung7.98e-2414
respiratory tube7.98e-2414
respiration organ7.98e-2414
pair of lungs7.98e-2414
lung primordium7.98e-2414
lung bud7.98e-2414
epithelial bud3.77e-1917
thoracic cavity element3.77e-1917
thoracic segment organ3.77e-1917
thoracic cavity3.77e-1917
thoracic segment of trunk3.77e-1917
respiratory primordium3.77e-1917
endoderm of foregut3.77e-1917
epithelial fold7.01e-1620
subdivision of digestive tract4.94e-15114
digestive system1.17e-14116
digestive tract1.17e-14116
primitive gut1.17e-14116
endoderm-derived structure2.70e-14118
endoderm2.70e-14118
presumptive endoderm2.70e-14118
gastrointestinal system1.36e-1147
breast3.78e-106
chest3.78e-106
epithelium of mucosa4.42e-099
gastrointestinal system epithelium4.42e-099
intestinal epithelium4.42e-099
intestine9.18e-0931
endo-epithelium9.90e-0969
intestinal mucosa2.98e-0813
wall of intestine2.98e-0813
gastrointestinal system mucosa2.98e-0813
organ system subdivision1.55e-07194
simple columnar epithelium2.60e-0711
mucosa5.07e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:122433031..122433037,%2B&oldid=4305001"