FFCP PHASE1:Mm9::chr13:49600254..49600279,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=407800|HGNC=|MCL_coexpression_id=2855|UniProt=Q5FW85|association_with_transcript=75bp_to_ENSMUST00000051504,NM_001012324,uc007qjl.1,uc011yzf.1_5end|description=CAGE_peak_3_at_Ecm2_5end|id=chr13:49600254..49600279,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.84e-10!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.58e-14,22;UBERON:0007100,9.22e-09,18;UBERON:0000948,9.22e-09,18;UBERON:0005498,9.22e-09,18;UBERON:0004140,9.22e-09,18;UBERON:0009881,9.22e-09,18;UBERON:0004141,9.22e-09,18;UBERON:0003084,9.22e-09,18;UBERON:0007005,9.22e-09,18;UBERON:0004139,9.22e-09,18;UBERON:0004291,9.22e-09,18;UBERON:0004535,1.52e-07,23;UBERON:0001009,1.52e-07,23;UBERON:0010707,3.09e-07,13|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0.514518872071894,3.43840127926508,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0,0,1.06958773443767,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,3.08977724289854,0.852151612890289,0.779358013808606,0,0.14084341977668,7.69958864485907,5.09610479413291,7.11066703153331,0,0,0,0.11418387971906,2.07150306917737,0.445326417194474,0,0,0,0,0.940709657085638,1.0053327306374,0,14.8937337627509,0,5.17653919831709,5.52103796150984,4.84875253135222,0,0.878342391034642,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0.611036183101898,2.73695335342205,0.252722758433675,2.52530227063769,0.130120442962704,0,0.180062129805349,0.150704817835715,0.544291993210623,0.896796041993948,1.12442069471675,2.84573707812917,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,2.50242524303038,3.83077383174383,5.96768195583036,0,0,0,0,0.207125772535502,0,0,1.42046841351126,0.983821158737019,2.46827380619805,1.62773761325285,3.75582761959467,2.80236821681207,3.12663714835613,8.70087559619205,8.51222500231485,9.0643992203706,3.95190207523891,6.71032093801859,0.210289948564127,0.514523061896422,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,1.36474860983384,0.898819408654221,0,0.597423819763102,0,0,0,0.203651327845314,0,0.210407459670956,0.632365371242573,0.738050739898011,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.624075346229121,0,0.179397413521912,0.964887042726734,1.10851914099963,0,0,0,0.469380496577004,0.670025029767263,0.476087281772027,0.585400943573396,0.788175720530955,1.32878813789265,2.07291199254733,1.63863314715738,2.07221978239075,2.16973587872267,0,0,0.491764273019036,2.20749397043786,1.44495530989013,0.703270119553219,0,11.6136626514012,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.709700426041343,0.534196811001766,1.14020871547503,1.48473110675282,2.65490276679926,0,0,0.377210159511796,0.295301892880773,0,0,1.45413491791002,1.78248689192361,1.58018378967908,4.21674434299995,2.06271086496374,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.713475270408282,0.164549020602121,0.913394847343798,0,0,1.98475558249466,6.92522262354216,1.93757312035087,2.77439454669517,3.10368094408155,1.80554989719567,0,0.741701208042039,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,3.10669656543463,0,0,0.165458490457098,0,0,0.337912250981556,1.29092962510329,2.21347454234715,1.8874681996628,0.724752362478018,1.44015003128933,0,0.202725215290164,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,6.57518112484113,0,0,0,1.54551675225752,0.93841237725591,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.561849044819294,0.768301828858431,0.689225627467359,0.476293691283074,1.0429589335037,0.964546102318525,0.412085900803307,0.294397840268795,1.37147700954166,1.95223386775271,0.715308569841963,0.436039249896986,0.846984423737976,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,1.68342681497322,0.118635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.999242311751784,0.467863216890817,1.28922632428979,4.78220830172108,8.38247392654159,5.10109238364927|short_description=p3@Ecm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=407800 | |||
|HGNC= | |||
|MCL_coexpression_id=2855 | |||
|TSSclassifier=NA | |||
|UniProt=Q5FW85 | |||
|association_with_transcript=75bp_to_ENSMUST00000051504,NM_001012324,uc007qjl.1,uc011yzf.1_5end | |||
|cluster_id=chr13:49600254..49600279,+ | |||
|description=CAGE_peak_3_at_Ecm2_5end | |||
|id=chr13:49600254..49600279,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.84e-10!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.58e-14,22;UBERON:0007100,9.22e-09,18;UBERON:0000948,9.22e-09,18;UBERON:0005498,9.22e-09,18;UBERON:0004140,9.22e-09,18;UBERON:0009881,9.22e-09,18;UBERON:0004141,9.22e-09,18;UBERON:0003084,9.22e-09,18;UBERON:0007005,9.22e-09,18;UBERON:0004139,9.22e-09,18;UBERON:0004291,9.22e-09,18;UBERON:0004535,1.52e-07,23;UBERON:0001009,1.52e-07,23;UBERON:0010707,3.09e-07,13 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0.514518872071894,3.43840127926508,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0,0,1.06958773443767,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,3.08977724289854,0.852151612890289,0.779358013808606,0,0.14084341977668,7.69958864485907,5.09610479413291,7.11066703153331,0,0,0,0.11418387971906,2.07150306917737,0.445326417194474,0,0,0,0,0.940709657085638,1.0053327306374,0,14.8937337627509,0,5.17653919831709,5.52103796150984,4.84875253135222,0,0.878342391034642,0.209446706813455,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0.611036183101898,2.73695335342205,0.252722758433675,2.52530227063769,0.130120442962704,0,0.180062129805349,0.150704817835715,0.544291993210623,0.896796041993948,1.12442069471675,2.84573707812917,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,2.50242524303038,3.83077383174383,5.96768195583036,0,0,0,0,0.207125772535502,0,0,1.42046841351126,0.983821158737019,2.46827380619805,1.62773761325285,3.75582761959467,2.80236821681207,3.12663714835613,8.70087559619205,8.51222500231485,9.0643992203706,3.95190207523891,6.71032093801859,0.210289948564127,0.514523061896422,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,1.36474860983384,0.898819408654221,0,0.597423819763102,0,0,0,0.203651327845314,0,0.210407459670956,0.632365371242573,0.738050739898011,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.624075346229121,0,0.179397413521912,0.964887042726734,1.10851914099963,0,0,0,0.469380496577004,0.670025029767263,0.476087281772027,0.585400943573396,0.788175720530955,1.32878813789265,2.07291199254733,1.63863314715738,2.07221978239075,2.16973587872267,0,0,0.491764273019036,2.20749397043786,1.44495530989013,0.703270119553219,0,11.6136626514012,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.709700426041343,0.534196811001766,1.14020871547503,1.48473110675282,2.65490276679926,0,0,0.377210159511796,0.295301892880773,0,0,1.45413491791002,1.78248689192361,1.58018378967908,4.21674434299995,2.06271086496374,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.713475270408282,0.164549020602121,0.913394847343798,0,0,1.98475558249466,6.92522262354216,1.93757312035087,2.77439454669517,3.10368094408155,1.80554989719567,0,0.741701208042039,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,3.10669656543463,0,0,0.165458490457098,0,0,0.337912250981556,1.29092962510329,2.21347454234715,1.8874681996628,0.724752362478018,1.44015003128933,0,0.202725215290164,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,6.57518112484113,0,0,0,1.54551675225752,0.93841237725591,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.561849044819294,0.768301828858431,0.689225627467359,0.476293691283074,1.0429589335037,0.964546102318525,0.412085900803307,0.294397840268795,1.37147700954166,1.95223386775271,0.715308569841963,0.436039249896986,0.846984423737976,0.761531471025089,0.914639864363863,1.05227884575137,1.22223702461276,1.68342681497322,0.118635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.999242311751784,0.467863216890817,1.28922632428979,4.78220830172108,8.38247392654159,5.10109238364927 | |||
|short_description=p3@Ecm2 | |||
}} |
Latest revision as of 17:01, 1 October 2015
Short description: | p3@Ecm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ecm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2855 |
Association with transcript: | 75bp_to_ENSMUST00000051504, NM_001012324, uc007qjl.1, uc011yzf.1_5end |
EntrezGene: | Ecm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 4.58e-14 | 22 |
primary circulatory organ | 9.22e-09 | 18 |
heart | 9.22e-09 | 18 |
primitive heart tube | 9.22e-09 | 18 |
primary heart field | 9.22e-09 | 18 |
anterior lateral plate mesoderm | 9.22e-09 | 18 |
heart tube | 9.22e-09 | 18 |
heart primordium | 9.22e-09 | 18 |
cardiac mesoderm | 9.22e-09 | 18 |
cardiogenic plate | 9.22e-09 | 18 |
heart rudiment | 9.22e-09 | 18 |
cardiovascular system | 1.52e-07 | 23 |
circulatory system | 1.52e-07 | 23 |
appendage girdle complex | 3.09e-07 | 13 |