FFCP PHASE1:Mm9::chr1:94728070..94728084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14733 | |EntrezGene=14733 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QZF2 | |UniProt=Q9QZF2 | ||
|association_with_transcript=-137bp_to_ENSMUST00000045970_5end | |association_with_transcript=-137bp_to_ENSMUST00000045970_5end | ||
|cluster_id=chr1:94728070..94728084,+ | |||
|description=CAGE_peak_9_at_Gpc1_5end | |description=CAGE_peak_9_at_Gpc1_5end | ||
|id=chr1:94728070..94728084,+ | |id=chr1:94728070..94728084,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.15e-12!44;CL:0000133!1.15e-12!44;CL:0002319!5.84e-12!43;CL:0000540!4.26e-11!33;CL:0000047!4.26e-11!33;CL:0000031!4.26e-11!33;CL:0000404!4.26e-11!33;CL:0000055!4.67e-09!50;CL:0000393!2.16e-08!39;CL:0000211!2.16e-08!39;CL:0000117!1.89e-07!23;CL:0000337!1.89e-07!23 | |ontology_enrichment_celltype=CL:0000221!1.15e-12!44;CL:0000133!1.15e-12!44;CL:0002319!5.84e-12!43;CL:0000540!4.26e-11!33;CL:0000047!4.26e-11!33;CL:0000031!4.26e-11!33;CL:0000404!4.26e-11!33;CL:0000055!4.67e-09!50;CL:0000393!2.16e-08!39;CL:0000211!2.16e-08!39;CL:0000117!1.89e-07!23;CL:0000337!1.89e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,3.99e-17,3;CL:0000221,8.02e-16,44;CL:0000133,8.02e-16,44;CL:0002609,8.56e-15,6;CL:0002319,1.65e-13,43;CL:0000540,6.09e-12,33;CL:0000047,6.09e-12,33;CL:0000031,6.09e-12,33;CL:0000404,6.09e-12,33;CL:0000217,9.10e-12,2;CL:0000328,9.10e-12,2;CL:0002573,9.10e-12,2;CL:0002376,9.10e-12,2;CL:0000218,9.10e-12,2;CL:0000692,9.10e-12,2;CL:0002377,9.10e-12,2;CL:0002375,9.10e-12,2;CL:0000117,1.33e-10,23;CL:0000337,1.33e-10,23;CL:0000393,6.31e-10,39;CL:0000211,6.31e-10,39;CL:0002321,2.65e-09,70;CL:0000215,3.94e-08,3;CL:0000120,1.51e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.90e-13!75;UBERON:0001016!6.90e-13!75;UBERON:0001017!1.23e-11!73;UBERON:0005743!1.23e-11!73;UBERON:0004121!6.97e-10!102;UBERON:0000924!6.97e-10!102;UBERON:0006601!6.97e-10!102;UBERON:0002780!4.72e-07!39;UBERON:0001890!4.72e-07!39;UBERON:0006240!4.72e-07!39 | |ontology_enrichment_uberon=UBERON:0000073!6.90e-13!75;UBERON:0001016!6.90e-13!75;UBERON:0001017!1.23e-11!73;UBERON:0005743!1.23e-11!73;UBERON:0004121!6.97e-10!102;UBERON:0000924!6.97e-10!102;UBERON:0006601!6.97e-10!102;UBERON:0002780!4.72e-07!39;UBERON:0001890!4.72e-07!39;UBERON:0006240!4.72e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.79e-12,7;UBERON:0003022,1.79e-12,7;UBERON:0002421,1.79e-12,7;UBERON:0000349,1.79e-12,7;UBERON:0002600,1.79e-12,7;UBERON:0001016,1.74e-08,75;UBERON:0000011,3.09e-08,3;UBERON:0000010,3.97e-08,11;UBERON:0004121,1.33e-07,95;UBERON:0000924,1.33e-07,95;UBERON:0006601,1.33e-07,95 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,1.65903379693564,0.810035629990144,0.841299845405528,0,0,1.95985278743926,1.72521847832825,1.83843757322004,0,0.255374676170375,0.153606533256243,0.659431438650969,0.640413505216868,1.56274011167028,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,2.19605960666234,1.51143120213571,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.970601099684455,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.502617408451458,0.173824320192276,0.255715457330331,0,0.324482526135515,0.305518091550949,0.870848794270651,0,0,0.520481771850815,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0.772043721344145,0,0.207125772535502,0,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0,0,0.243206428637567,1.02339991197733,0,0.134206418760372,0.420579897128254,1.02904612379284,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,1.51482556322624,0,0.390438744296638,0.215423397732799,1.67278158566786,0.668396022247182,1.98153571552183,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.718976700153791,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0.512200817262403,0,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0,0,0.754505365544305,0.187283014939765,0.320125762024346,0.287177344778066,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.701794825336225,1.28922632428979,1.3390183244819,0.220591419119515,0.695603506861264 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,1.65903379693564,0.810035629990144,0.841299845405528,0,0,1.95985278743926,1.72521847832825,1.83843757322004,0,0.255374676170375,0.153606533256243,0.659431438650969,0.640413505216868,1.56274011167028,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,2.19605960666234,1.51143120213571,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.970601099684455,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0.502617408451458,0.173824320192276,0.255715457330331,0,0.324482526135515,0.305518091550949,0.870848794270651,0,0,0.520481771850815,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0.876782929710299,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0.772043721344145,0,0.207125772535502,0,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0,0,0.243206428637567,1.02339991197733,0,0.134206418760372,0.420579897128254,1.02904612379284,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,1.51482556322624,0,0.390438744296638,0.215423397732799,1.67278158566786,0.668396022247182,1.98153571552183,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.718976700153791,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0.512200817262403,0,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0,0,0.754505365544305,0.187283014939765,0.320125762024346,0.287177344778066,0,0.695305955669133,0.38581844092741,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.591026894253381,0,0.309873682371932,0.771626443924566,0.499621155875892,0.701794825336225,1.28922632428979,1.3390183244819,0.220591419119515,0.695603506861264 | ||
|short_description=p9@Gpc1 | |short_description=p9@Gpc1 | ||
}} | }} |
Latest revision as of 19:37, 1 October 2015
Short description: | p9@Gpc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Gpc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -137bp_to_ENSMUST00000045970_5end |
EntrezGene: | Gpc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 3.99e-17 | 3 |
ectodermal cell | 8.02e-16 | 44 |
neurectodermal cell | 8.02e-16 | 44 |
neuron of cerebral cortex | 8.56e-15 | 6 |
neural cell | 1.65e-13 | 43 |
neuron | 6.09e-12 | 33 |
neuronal stem cell | 6.09e-12 | 33 |
neuroblast | 6.09e-12 | 33 |
electrically signaling cell | 6.09e-12 | 33 |
insulating cell | 9.10e-12 | 2 |
myelin accumulating cell | 9.10e-12 | 2 |
Schwann cell | 9.10e-12 | 2 |
non-myelinating Schwann cell | 9.10e-12 | 2 |
myelinating Schwann cell;;Schwann cell | 9.10e-12 | 2 |
terminal Schwann cell | 9.10e-12 | 2 |
immature Schwann cell | 9.10e-12 | 2 |
Schwann cell precursor | 9.10e-12 | 2 |
CNS neuron (sensu Vertebrata) | 1.33e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-10 | 23 |
electrically responsive cell | 6.31e-10 | 39 |
electrically active cell | 6.31e-10 | 39 |
embryonic cell | 2.65e-09 | 70 |
barrier cell | 3.94e-08 | 3 |
granule cell | 1.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.79e-12 | 7 |
lobe parts of cerebral cortex | 1.79e-12 | 7 |
hippocampal formation | 1.79e-12 | 7 |
limbic system | 1.79e-12 | 7 |
limbic lobe | 1.79e-12 | 7 |
nervous system | 1.74e-08 | 75 |
parasympathetic nervous system | 3.09e-08 | 3 |
peripheral nervous system | 3.97e-08 | 11 |
ectoderm-derived structure | 1.33e-07 | 95 |
ectoderm | 1.33e-07 | 95 |
presumptive ectoderm | 1.33e-07 | 95 |