FFCP PHASE2:Mm9::chrX:45872717..45872735,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:19337 |HGNC= |MCL_coexpression_id=392 |TSSclassifier=NA |UniProt=uniprot:P97950,uniprot:Q3SXA7 |association_with_tr...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=19337 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=392 | |MCL_coexpression_id=392 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P97950,Q3SXA7 | ||
|association_with_transcript=70bp_to_NM_011228,uc009tci.1_5end | |association_with_transcript=70bp_to_NM_011228,uc009tci.1_5end | ||
|cluster_id=chrX:45872717..45872735,+ | |cluster_id=chrX:45872717..45872735,+ | ||
Latest revision as of 21:13, 1 October 2015
| Short description: | p4@Rab33a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Rab33a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:392 |
| Association with transcript: | 70bp_to_NM_011228, uc009tci.1_5end |
| EntrezGene: | Rab33a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@Rab33a |
|---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 5.36e-35 | 23 |
| neuroblast (sensu Vertebrata) | 5.36e-35 | 23 |
| neuron | 2.20e-23 | 33 |
| neuronal stem cell | 2.20e-23 | 33 |
| neuroblast | 2.20e-23 | 33 |
| electrically signaling cell | 2.20e-23 | 33 |
| neuron of cerebral cortex | 2.26e-20 | 6 |
| electrically responsive cell | 2.84e-19 | 39 |
| electrically active cell | 2.84e-19 | 39 |
| neural cell | 3.62e-17 | 43 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| gray matter | 2.12e-42 | 34 |
| brain grey matter | 1.81e-32 | 29 |
| regional part of telencephalon | 1.81e-32 | 29 |
| telencephalon | 1.81e-32 | 29 |
| cerebral cortex | 5.95e-27 | 21 |
| cerebral hemisphere | 5.95e-27 | 21 |
| pallium | 5.95e-27 | 21 |
| neural tube | 2.88e-26 | 52 |
| neural rod | 2.88e-26 | 52 |
| future spinal cord | 2.88e-26 | 52 |
Showing 1 to 10 of 56 entries
