FFCP PHASE1:Mm9::chr3:27081895..27081908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320024 | |EntrezGene=320024 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLF1 | |UniProt=Q8BLF1 | ||
|association_with_transcript=8bp_to_ENSMUST00000046515_5end | |association_with_transcript=8bp_to_ENSMUST00000046515_5end | ||
|cluster_id=chr3:27081895..27081908,+ | |||
|description=CAGE_peak_2_at_Nceh1_5end | |description=CAGE_peak_2_at_Nceh1_5end | ||
|id=chr3:27081895..27081908,+ | |id=chr3:27081895..27081908,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.41e-10!75;UBERON:0001016!4.41e-10!75;UBERON:0001017!2.98e-09!73;UBERON:0005743!2.98e-09!73;UBERON:0002021!3.82e-08!10;UBERON:0000411!3.82e-08!10;UBERON:0001950!3.82e-08!10;UBERON:0000955!1.67e-07!50;UBERON:0006238!1.67e-07!50;UBERON:0000480!1.77e-07!308;UBERON:0000467!1.77e-07!308;UBERON:0002346!2.13e-07!71;UBERON:0003075!2.13e-07!71;UBERON:0007284!2.13e-07!71;UBERON:0004121!2.97e-07!102;UBERON:0000924!2.97e-07!102;UBERON:0006601!2.97e-07!102;UBERON:0002616!4.38e-07!49;UBERON:0001049!4.68e-07!52;UBERON:0005068!4.68e-07!52;UBERON:0006241!4.68e-07!52;UBERON:0007135!4.68e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.93e-10,75;UBERON:0001017,3.33e-09,73;UBERON:0010314,7.08e-09,92;UBERON:0002021,3.58e-08,10;UBERON:0000411,3.58e-08,10;UBERON:0001950,3.58e-08,10;UBERON:0000073,5.48e-08,54;UBERON:0001049,4.86e-07,52;UBERON:0005068,4.86e-07,52;UBERON:0006241,4.86e-07,52;UBERON:0007135,4.86e-07,52 | |||
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| |phase1_expression=1.60148847104794,1.74487703819681,1.36499771816861,1.51232105653415,1.50268718983904,2.85394762250213,3.73780224952841,2.06597317506522,1.40788722151667,0.70219357896598,3.25314139628459,4.46724090373884,4.79362043807376,4.98296293788285,3.33109761815663,2.22722794128809,0.699561878128147,4.10100814965709,4.9361196098066,2.97072756258621,3.82694805679814,1.78723712161594,2.35079810225042,3.03985603307473,2.98232065387321,1.72269589234506,3.01533397311352,3.44753972297422,2.85035129184561,0.504060259519861,3.76941868114018,3.17515336729816,5.53558308826113,0,1.73310971850765,1.66234645358492,0.204169356262369,1.67412652294763,2.3440060335714,2.61761871986899,1.76469446409304,1.36609096991689,4.85510353031154,2.7697299954627,2.23029248682932,2.20256102594018,0.782391344348039,3.92445281484804,3.07560655828261,3.4997381833371,4.61955191363696,2.87505128729943,2.51673909086605,4.35217285206807,2.35265659399725,1.28629718017973,2.29226751951005,1.54701627683233,0.809265843438391,1.5869729378161,2.53532561402472,1.0165335962074,1.77858959222228,2.6996991518442,0.988866362566974,2.1314403448383,2.69640099466564,1.92109152660777,0.725827286159344,0.945041568321835,0.210324961351382,4.57041575046086,6.18431914664518,1.5923803897944,0.862609239164127,0,12.1127469099328,14.1732945274558,16.8967186581868,2.2420668914133,1.64677758484337,2.6045668527838,11.725685958058,13.5063026407603,14.0574387954665,5.30331453852602,4.8406371471695,1.3047961207771,7.79979791331796,10.2777321745228,2.6087803983151,0.860423876981386,1.3599426674155,3.2382191498269,1.94932925234301,6.72040330646003,3.37066608316204,1.02258193546835,0,1.06001872353102,2.39433813620357,3.84979432242953,2.54805239706646,0,0.865964164044856,2.02687892380079,3.0331466700887,2.62622923353838,6.47344709117929,10.2425075954729,2.77576522825817,4.26251669636998,5.5347719341454,8.28974523039424,7.99603208522793,9.42499434972566,5.43828929015623,1.73519228303894,2.65383165584962,1.13236794963186,0.441683036920787,0.969750506270444,1.86391761218122,7.90508151931177,9.63454851341893,2.29911349687732,1.43778149407104,1.19980546198682,1.77898317902291,12.7322043494099,14.1825186873774,2.1361239859187,15.9918374576894,16.1100738118108,12.6750707181332,12.6548185192851,1.2220723662038,1.8661045591514,2.52722758433675,3.99839526184301,1.30120442962704,0.459804208866946,0.360124259610698,1.35634336052144,1.56483948048054,1.7935920839879,1.87403449119458,4.9153640440413,1.07783996466421,1.13463648100692,1.40760899331159,1.09597866213787,1.39023624612799,1.0447564995665,1.02891068203972,1.79130840136644,0.702213187313235,0.772043721344145,1.13665399758237,1.65700618028402,3.28336483973535,2.16074473753218,3.55117103377815,2.55793501271625,3.08534225774756,3.95307706075693,3.21928081679543,4.55384835231961,2.30383789878873,4.59668899421467,4.9451973822972,4.09359964790931,6.58650345873152,4.02619256281115,12.6173969138476,1.02904612379284,3.96502539580558,2.3800550999719,1.06644125267617,1.16118335930219,1.54640953586512,1.00841762311671,1.33426826306922,2.47293313946327,2.37264530772256,2.30578536613615,1.00534083520108,1.98956472041151,1.36474860983384,4.49409704327111,2.80979464837102,2.58883655230677,1.32767530667157,1.37098215131675,1.1270773567308,1.62921062276251,3.29719228184964,2.52488951605147,3.92066530170395,6.7900668070617,8.00693511991011,5.92306386824642,2.37162101669719,0.500535317148282,0.786235980452812,0.899448449539415,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,4.21551589615092,3.0201755450689,4.31304619582064,2.23284568601102,4.99260276983297,1.76805214562978,1.79397413521912,1.92977408545347,7.944387177164,0.568474235311454,1.62964976442026,0.678980343100753,1.87752198630802,2.68010011906905,2.61848004974615,3.31727201358258,1.7339865851681,3.98636441367795,4.30527875375215,3.93271955317771,4.48980952851328,5.49666422609744,6.03165135757089,9.24639662491806,0.491764273019036,0.275936746304732,10.4357883492065,10.5490517932983,1.63934945376675,1.51482556322624,2.2085575359138,2.73307121007647,1.93881057959519,4.77937595905104,3.34198011123591,3.96307143104365,5.26253912177363,2.63030272120181,2.76701444562566,10.2822821254978,3.83238230062325,0.712262414669021,1.46598263418218,3.62934270539578,0,0.971122544619926,0.906970670894253,3.39489143560617,2.36241514304618,1.53717573971964,1.80899805217755,1.81766864738753,3.20847640546249,4.42451461110142,4.21674434299995,1.03135543248187,7.14923172082955,0.720244376125241,0.776152102696527,1.71469628025274,2.30542303734956,2.14042581122485,2.79733335023606,1.522324745573,3.98941903708308,2.75381692122966,2.42581237860458,1.31909002353184,0.807322133479528,0.784068024066026,0.596861720015682,0.656563598980245,2.04036585640896,10.198391610578,2.39219233116994,1.23832120777933,0.740778109478847,1.50694765603753,1.50363650493128,2.51655990527175,2.03974115992626,2.93898049879682,1.79659965945751,7.63736494412091,0.316335993581135,1.21991680276109,0.972048067396211,0.8363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| ||
|short_description=p2@Nceh1 | |short_description=p2@Nceh1 | ||
}} | }} |
Latest revision as of 21:49, 1 October 2015
Short description: | p2@Nceh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nceh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 8bp_to_ENSMUST00000046515_5end |
EntrezGene: | Nceh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.93e-10 | 75 |
central nervous system | 3.33e-09 | 73 |
structure with developmental contribution from neural crest | 7.08e-09 | 92 |
occipital lobe | 3.58e-08 | 10 |
visual cortex | 3.58e-08 | 10 |
neocortex | 3.58e-08 | 10 |
regional part of nervous system | 5.48e-08 | 54 |
neural tube | 4.86e-07 | 52 |
neural rod | 4.86e-07 | 52 |
future spinal cord | 4.86e-07 | 52 |
neural keel | 4.86e-07 | 52 |