FFCP PHASE1:Mm9::chr8:34495942..34495989,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:34495942..34495989,-
|short_description=p1@Wrn
|description=CAGE_peak_1_at_Wrn_5end
|association_with_transcript=0bp_to_uc009ljw.1,uc012gce.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22427 | |EntrezGene=22427 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=411 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TB25,Q3TZ13 | |UniProt=Q3TB25,Q3TZ13 | ||
|association_with_transcript=0bp_to_uc009ljw.1,uc012gce.1_5end | |||
|cluster_id=chr8:34495942..34495989,- | |||
|description=CAGE_peak_1_at_Wrn_5end | |||
|id=chr8:34495942..34495989,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.82e-14!193;UBERON:0004120!1.82e-14!193;UBERON:0006603!1.82e-14!193;UBERON:0003104!4.88e-11!131;UBERON:0009142!4.88e-11!131;UBERON:0000077!2.81e-10!97;UBERON:0001041!8.98e-10!92;UBERON:0005057!3.20e-09!51;UBERON:0002405!9.05e-09!70;UBERON:0001048!5.40e-08!147;UBERON:0009569!1.27e-07!66;UBERON:0000466!1.46e-07!79;UBERON:0004921!1.90e-07!126;UBERON:0004185!1.90e-07!126;UBERON:0004119!2.63e-07!130;UBERON:0000925!2.63e-07!130;UBERON:0006595!2.63e-07!130;UBERON:0001007!4.61e-07!128;UBERON:0001555!4.61e-07!128;UBERON:0007026!4.61e-07!128;UBERON:0005911!8.85e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,4.52e-11,80;UBERON:0001048,3.77e-08,134;UBERON:0004921,4.12e-08,114;UBERON:0004119,6.24e-08,118;UBERON:0000925,6.24e-08,118;UBERON:0006595,6.24e-08,118;UBERON:0001007,1.11e-07,116;UBERON:0001555,1.11e-07,116;UBERON:0007026,1.11e-07,116;UBERON:0009569,1.27e-07,66;UBERON:0000077,4.12e-07,35;UBERON:0000926,4.37e-07,120;UBERON:0004120,4.37e-07,120;UBERON:0006603,4.37e-07,120;UBERON:0005911,8.72e-07,69;UBERON:0005177,8.86e-07,79 | |||
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|phase1_expression=9.28863313207805,4.53668029931169,3.63999391511629,9.98131897312539,4.50806156951712,5.37213670118047,7.2419918584613,23.3713215429253,19.851209823385,12.4054198950657,9.93064215707929,7.8974437405383,29.960127737961,20.0192721539504,40.6393909415109,62.9698081582359,60.8618833971488,31.3884854531446,33.044578498983,25.4633791078818,7.73893940374735,22.9362097274045,18.8063848180033,10.0795226359846,9.86459908588831,2.29692785646008,3.01533397311352,6.89507944594845,10.6413114895569,13.6096270070363,6.43018480900384,13.9706748161119,15.9916844771988,15.8481681015439,13.2871745085586,11.137721239019,11.2293145944303,84.9619210395923,44.5361146378566,81.1461803159387,58.8231488031014,75.8180488303875,70.3990011895173,10.7012295279241,10.7459547092685,7.89251034295231,2.34717403304412,1.30815093828268,1.09843091367236,2.91644848611425,2.2397827460058,0,32.5498255752009,28.2891235384424,34.2815675125313,5.65970759279083,7.73640287834643,6.70373719960675,2.02316460859598,2.11596391708813,0.633831403506179,1.0165335962074,0,3.1496490104849,1.97773272513395,0.7104801149461,2.09720077362883,1.92109152660777,3.42175720617976,1.08004750665353,1.68259969081106,1.42825492201902,2.20868540951614,2.69479758272899,1.62937300731002,1.83843757322004,3.30347642998166,3.70293280447044,5.06901559745603,0.263772575460388,1.09785172322892,0.52091337055676,2.23346399201105,3.93933827022176,5.19514042441154,1.76777151284201,4.55589378557129,0.372798891650601,6.96680978665293,15.6433129421046,28.9864488701678,12.0459342777394,1.3599426674155,4.85732872474035,5.84798775702902,10.7526452903361,12.2186645514624,16.1908806449155,8.83272415649754,9.18682893726885,7.74638808771743,10.2661181931454,5.09610479413291,0,7.57718643539249,4.81383744402687,4.54972000513305,10.2765491747154,67.0649118646175,20.0396887737513,7.98032503124225,10.6562917409249,11.5307748628029,15.6751546174727,15.1689432205059,11.8126595849895,15.3260879995312,25.7386855317443,65.4611808442907,20.544389943321,38.4264242121085,45.5782737947109,16.775258509631,8.49064311333487,5.65506108396329,20.9474785271045,25.1611761462433,16.7972764678154,23.7621324626631,8.83764772488454,11.4375150704657,3.26701315493447,11.298580812498,6.64860189058859,6.85700547046548,7.30085683804909,14.7667077582959,40.6810793895004,14.1524744722858,13.2578369208479,10.539755879979,8.5063778640385,8.10279584124071,18.0845781402858,16.5328692937727,20.1138540847214,10.7756983243688,11.9003550539947,12.0718076042392,17.5868654556072,16.7153567955751,11.1789823538063,21.1315909411454,19.8503734917635,20.7839957772023,15.9227413454795,23.87524836865,20.0731367549478,22.7330799516474,9.73491130916859,12.195355119017,10.9837857491219,15.1516630774535,12.5929108318338,11.5700334665534,13.4869687955237,9.38956904898667,9.80828875884224,11.0255099442032,12.148392341853,13.4574223846121,11.4035990191759,12.7339066868809,13.2864354572768,7.99101804543684,5.35103984372279,31.3897843834608,7.66906643324278,13.2238715331845,16.0243303583703,14.1754207454303,13.5127961497639,8.2279876222602,14.6473732106671,12.8122846617018,12.0230236948528,17.5934646160189,15.5186048192098,16.182019230887,13.4822911298133,23.1267713365923,19.515844778928,5.31070122668629,15.4235492023134,20.2873924211545,17.9213168503877,14.5464365375719,14.7986579968572,17.8959400061648,17.2703873136135,16.1708689676616,15.7948369819905,16.6013471168803,48.3850806576673,52.284692700112,55.0912175342892,50.9178904685142,49.200140589493,37.6846260636501,25.0295639582205,32.5891805817821,27.7307027319962,38.8174157623857,24.5613025461212,17.78614736753,14.9021537988796,16.6839594575378,15.4381926836277,29.5605104266567,13.4538902357044,21.0224819610213,15.9560380628677,21.1221223459652,24.4559135865051,19.2815349117671,19.9036320814955,25.3792582010968,21.4820748959312,18.4967531642685,20.4829143394672,27.1115421529456,28.0619173648132,13.5712155545345,10.3342079925555,12.2941068254759,15.7283945393698,11.8807436590966,8.43924143463863,9.01642199571715,14.895784705058,5.04813151066011,3.51394869866975,7.97066571611356,8.36390792833932,10.2487390077901,4.24614796183249,7.69140333182299,6.42962887404886,6.7198922250909,14.7807805554031,24.2717545706139,11.5742642383716,14.985600260529,21.4461159864296,17.2568679841952,9.95400608235424,7.25576536715402,9.6188590675508,7.08724542913855,11.3751004739253,17.573123935439,19.2672876623078,18.8943610543902,12.3254335594968,11.5960469432499,16.5016869197099,19.0646179222121,13.324520958317,6.07985813778946,10.9311887866112,16.6699819623737,10.7021290561242,14.4803138129866,7.30715877875038,14.7843176080138,20.5477108737906,19.1859706307817,21.9298716412168,22.9279485908186,16.9479319048118,12.0566067443168,15.1009627765456,15.1570035047522,10.198391610578,55.3621653785043,16.5109494370578,42.409546767664,96.6330184434065,94.3190171275074,83.0464768739677,30.2561605389062,31.908931129794,28.3309946299069,4.77335309007557,12.1789357528737,16.8755157715284,19.3329560071024,16.5179753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| ||
|short_description=p1@Wrn | |||
}} | }} |
Latest revision as of 22:07, 1 October 2015
Short description: | p1@Wrn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wrn_5end |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | 0bp_to_uc009ljw.1, uc012gce.1_5end |
EntrezGene: | Wrn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 4.52e-11 | 80 |
primordium | 3.77e-08 | 134 |
subdivision of digestive tract | 4.12e-08 | 114 |
endoderm-derived structure | 6.24e-08 | 118 |
endoderm | 6.24e-08 | 118 |
presumptive endoderm | 6.24e-08 | 118 |
digestive system | 1.11e-07 | 116 |
digestive tract | 1.11e-07 | 116 |
primitive gut | 1.11e-07 | 116 |
subdivision of trunk | 1.27e-07 | 66 |
mixed endoderm/mesoderm-derived structure | 4.12e-07 | 35 |
mesoderm | 4.37e-07 | 120 |
mesoderm-derived structure | 4.37e-07 | 120 |
presumptive mesoderm | 4.37e-07 | 120 |
endo-epithelium | 8.72e-07 | 69 |
trunk region element | 8.86e-07 | 79 |