FFCP PHASE2:Mm9::chr5:129459178..129459206,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:231760 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:Q80U40,uniprot:D3YXR8 |association_with_tra...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=231760 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q80U40,D3YXR8 | ||
|association_with_transcript=30bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | |association_with_transcript=30bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | ||
|cluster_id=chr5:129459178..129459206,- | |cluster_id=chr5:129459178..129459206,- | ||
Latest revision as of 22:35, 1 October 2015
| Short description: | p2@Rimbp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rimbp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 30bp_to_ENSMUST00000031370, ENSMUST00000111346, NM_001081388, uc008zsl.1, uc008zsm.1, uc012edx.1_5end |
| EntrezGene: | Rimbp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Rimbp2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.65e-25 | 23 |
| neuroblast (sensu Vertebrata) | 8.65e-25 | 23 |
| neuron | 2.79e-18 | 33 |
| neuronal stem cell | 2.79e-18 | 33 |
| neuroblast | 2.79e-18 | 33 |
| electrically signaling cell | 2.79e-18 | 33 |
| electrically responsive cell | 2.71e-14 | 39 |
| electrically active cell | 2.71e-14 | 39 |
| neural cell | 2.82e-12 | 43 |
| ectodermal cell | 7.83e-12 | 44 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 7.97e-40 | 54 |
| central nervous system | 8.47e-38 | 73 |
| neurectoderm | 1.71e-37 | 64 |
| neural plate | 1.71e-37 | 64 |
| presumptive neural plate | 1.71e-37 | 64 |
| neural tube | 4.62e-37 | 52 |
| neural rod | 4.62e-37 | 52 |
| future spinal cord | 4.62e-37 | 52 |
| neural keel | 4.62e-37 | 52 |
| nervous system | 2.25e-36 | 75 |
Showing 1 to 10 of 50 entries
