FFCP PHASE1:Mm9::chr8:42139964..42139996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=102103 | |EntrezGene=102103 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=140bp_to_ENSMUST00000142936_5end | |association_with_transcript=140bp_to_ENSMUST00000142936_5end | ||
|cluster_id=chr8:42139964..42139996,- | |||
|description=CAGE_peak_20_at_Mtus1_5end | |description=CAGE_peak_20_at_Mtus1_5end | ||
|id=chr8:42139964..42139996,- | |id=chr8:42139964..42139996,- | ||
|ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0000540!3.59e-08!33;CL:0000047!3.59e-08!33;CL:0000031!3.59e-08!33;CL:0000404!3.59e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0000540!3.59e-08!33;CL:0000047!3.59e-08!33;CL:0000031!3.59e-08!33;CL:0000404!3.59e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.45e-15,3;CL:0000117,9.20e-10,23;CL:0000337,9.20e-10,23;CL:0000120,1.53e-07,3;CL:0002613,3.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.92e-07,3;DOID:4045,1.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002346!6.76e-18!71;UBERON:0003075!6.76e-18!71;UBERON:0007284!6.76e-18!71;UBERON:0000033!2.16e-16!63;UBERON:0004121!1.22e-14!102;UBERON:0000924!1.22e-14!102;UBERON:0006601!1.22e-14!102;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0001017!5.59e-13!73;UBERON:0005743!5.59e-13!73;UBERON:0003056!5.84e-13!49;UBERON:0000073!6.39e-13!75;UBERON:0001016!6.39e-13!75;UBERON:0000955!1.40e-11!50;UBERON:0006238!1.40e-11!50;UBERON:0002616!7.27e-11!49;UBERON:0002020!5.05e-09!34;UBERON:0007811!1.53e-08!86;UBERON:0003076!2.37e-08!12;UBERON:0003057!2.37e-08!12;UBERON:0003080!3.12e-08!40;UBERON:0002780!1.61e-07!39;UBERON:0001890!1.61e-07!39;UBERON:0006240!1.61e-07!39;UBERON:0000153!7.83e-07!94;UBERON:0000970!9.93e-07!9;UBERON:0000019!9.93e-07!9;UBERON:0000047!9.93e-07!9;UBERON:0004088!9.93e-07!9;UBERON:0002104!9.93e-07!9;UBERON:0001456!9.93e-07!9;UBERON:0003072!9.93e-07!9;UBERON:0003071!9.93e-07!9;UBERON:0004128!9.93e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.45e-15,3;UBERON:0003076,8.61e-15,12;UBERON:0003057,8.61e-15,12;UBERON:0001948,1.48e-09,5;UBERON:0002315,1.48e-09,5;UBERON:0002346,1.79e-09,64;UBERON:0003075,1.79e-09,64;UBERON:0007284,1.79e-09,64;UBERON:0004733,2.92e-08,6;UBERON:0004732,2.92e-08,6;UBERON:0002028,2.92e-08,6;UBERON:0007277,2.92e-08,6;UBERON:0004121,3.13e-08,95;UBERON:0000924,3.13e-08,95;UBERON:0006601,3.13e-08,95;UBERON:0010371,4.45e-08,73;UBERON:0002240,4.83e-08,6;UBERON:0005174,4.83e-08,6;UBERON:0001137,4.83e-08,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,1.0470474879476,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.630974884054146,0.285650984403804,0.662605622854841,0.244981598429908,0.862609239164127,0,0,0.255374676170375,0.46081959976873,1.05509030184155,1.18933936683133,0.52091337055676,0,0.56276261003168,0.45839474333043,1.17851434189467,2.56269025438385,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0.969750506270444,0,3.80615036115011,7.12118803165747,0,0,0,0.127070227073065,1.64769703345305,0.915001205637253,0.502617408451458,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0.390361328888111,0.689706313300419,0.360124259610698,1.20563854268572,1.56483948048054,1.66547836370305,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0.847328283455281,0,0,0,0,0,0,0,0.741701208042039,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.561849044819294,0.448176066834085,0.287177344778066,0,0.347652977834566,0,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,1.0470474879476,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.630974884054146,0.285650984403804,0.662605622854841,0.244981598429908,0.862609239164127,0,0,0.255374676170375,0.46081959976873,1.05509030184155,1.18933936683133,0.52091337055676,0,0.56276261003168,0.45839474333043,1.17851434189467,2.56269025438385,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0.969750506270444,0,3.80615036115011,7.12118803165747,0,0,0,0.127070227073065,1.64769703345305,0.915001205637253,0.502617408451458,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0.390361328888111,0.689706313300419,0.360124259610698,1.20563854268572,1.56483948048054,1.66547836370305,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0.847328283455281,0,0,0,0,0,0,0,0.741701208042039,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.561849044819294,0.448176066834085,0.287177344778066,0,0.347652977834566,0,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p20@Mtus1 | |short_description=p20@Mtus1 | ||
}} | }} |
Latest revision as of 00:18, 2 October 2015
Short description: | p20@Mtus1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Mtus1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 140bp_to_ENSMUST00000142936_5end |
EntrezGene: | Mtus1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.45e-15 | 3 |
CNS neuron (sensu Vertebrata) | 9.20e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.20e-10 | 23 |
granule cell | 1.53e-07 | 3 |
striatum neuron | 3.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.45e-15 | 3 |
posterior neural tube | 8.61e-15 | 12 |
chordal neural plate | 8.61e-15 | 12 |
regional part of spinal cord | 1.48e-09 | 5 |
gray matter of spinal cord | 1.48e-09 | 5 |
neurectoderm | 1.79e-09 | 64 |
neural plate | 1.79e-09 | 64 |
presumptive neural plate | 1.79e-09 | 64 |
segmental subdivision of hindbrain | 2.92e-08 | 6 |
segmental subdivision of nervous system | 2.92e-08 | 6 |
hindbrain | 2.92e-08 | 6 |
presumptive hindbrain | 2.92e-08 | 6 |
ectoderm-derived structure | 3.13e-08 | 95 |
ectoderm | 3.13e-08 | 95 |
presumptive ectoderm | 3.13e-08 | 95 |
ecto-epithelium | 4.45e-08 | 73 |
spinal cord | 4.83e-08 | 6 |
dorsal region element | 4.83e-08 | 6 |
dorsum | 4.83e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.92e-07 | 3 |
muscle cancer | 1.92e-07 | 3 |