FFCP PHASE1:Mm9::chr6:99605659..99605670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:99605659..99605670,+ | |||
|description=CAGE_peak_at_chr6:99605659..99605670,+ | |description=CAGE_peak_at_chr6:99605659..99605670,+ | ||
|id=chr6:99605659..99605670,+ | |id=chr6:99605659..99605670,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.17e-12!9;CL:0000789!1.17e-12!9;CL:0002420!1.17e-12!9;CL:0002419!1.17e-12!9;CL:0000790!1.17e-12!9;CL:0000838!1.02e-11!12;CL:0000542!1.05e-10!13;CL:0000051!1.05e-10!13;CL:0000624!1.74e-10!8;CL:0000084!3.72e-10!11;CL:0000827!3.72e-10!11;CL:0002031!2.49e-09!25;CL:0000738!7.34e-08!17;CL:0002087!7.34e-08!17;CL:0000988!8.36e-07!32;CL:0002032!8.36e-07!32;CL:0000037!8.36e-07!32;CL:0000566!8.36e-07!32;CL:0000837!8.36e-07!32 | |ontology_enrichment_celltype=CL:0000791!1.17e-12!9;CL:0000789!1.17e-12!9;CL:0002420!1.17e-12!9;CL:0002419!1.17e-12!9;CL:0000790!1.17e-12!9;CL:0000838!1.02e-11!12;CL:0000542!1.05e-10!13;CL:0000051!1.05e-10!13;CL:0000624!1.74e-10!8;CL:0000084!3.72e-10!11;CL:0000827!3.72e-10!11;CL:0002031!2.49e-09!25;CL:0000738!7.34e-08!17;CL:0002087!7.34e-08!17;CL:0000988!8.36e-07!32;CL:0002032!8.36e-07!32;CL:0000037!8.36e-07!32;CL:0000566!8.36e-07!32;CL:0000837!8.36e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.32e-14,9;CL:0000789,1.32e-14,9;CL:0002420,1.32e-14,9;CL:0002419,1.32e-14,9;CL:0000790,1.32e-14,9;CL:0000084,5.16e-12,11;CL:0000827,5.16e-12,11;CL:0000838,4.87e-11,12;CL:0000542,3.26e-10,13;CL:0000051,3.26e-10,13;CL:0000624,1.15e-09,8;CL:0000815,1.19e-09,1;CL:0000792,1.19e-09,1;CL:0000625,2.52e-09,1;CL:0000738,7.13e-08,17;CL:0002087,7.13e-08,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.94e-29!24;UBERON:0002370!3.34e-27!23;UBERON:0000974!3.34e-27!23;UBERON:0004807!3.34e-27!23;UBERON:0005058!3.34e-27!23;UBERON:0003351!3.34e-27!23;UBERON:0009113!3.34e-27!23;UBERON:0003295!3.34e-27!23;UBERON:0009722!3.34e-27!23;UBERON:0005562!3.34e-27!23;UBERON:0007690!3.34e-27!23;UBERON:0006562!6.79e-26!24;UBERON:0001557!6.79e-26!24;UBERON:0001042!6.79e-26!24;UBERON:0008814!6.79e-26!24;UBERON:0009145!6.79e-26!24;UBERON:0004177!3.82e-23!29;UBERON:0000072!1.50e-22!27;UBERON:0002193!1.29e-21!48;UBERON:0002390!5.43e-21!45;UBERON:0003061!5.43e-21!45;UBERON:0001004!1.45e-16!42;UBERON:0000063!1.91e-16!35;UBERON:0000065!4.16e-15!41;UBERON:0002405!1.76e-14!70;UBERON:0005057!9.23e-13!51;UBERON:0002530!1.44e-11!65;UBERON:0003929!2.95e-10!55;UBERON:0002368!3.01e-10!60;UBERON:0003081!2.64e-09!88;UBERON:0005911!2.74e-08!69;UBERON:0000490!7.42e-08!66;UBERON:0000949!8.23e-08!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.78e-16,23;UBERON:0000974,1.78e-16,23;UBERON:0004807,1.78e-16,23;UBERON:0005058,1.78e-16,23;UBERON:0003351,1.78e-16,23;UBERON:0009113,1.78e-16,23;UBERON:0003295,1.78e-16,23;UBERON:0009722,1.78e-16,23;UBERON:0005562,1.78e-16,23;UBERON:0007690,1.78e-16,23;UBERON:0006562,8.88e-16,24;UBERON:0003408,8.88e-16,24;UBERON:0001557,8.88e-16,24;UBERON:0001042,8.88e-16,24;UBERON:0008814,8.88e-16,24;UBERON:0009145,8.88e-16,24;UBERON:0000072,5.43e-14,27;UBERON:0004177,5.26e-13,29;UBERON:0005057,5.26e-13,29;UBERON:0000077,1.02e-10,35;UBERON:0007811,2.08e-10,36;UBERON:0002193,4.06e-10,48;UBERON:0002405,4.06e-10,48;UBERON:0000029,9.82e-10,1;UBERON:0001097,9.82e-10,1;UBERON:0003968,9.82e-10,1;UBERON:0001467,9.82e-10,1;UBERON:0000065,4.31e-09,41;UBERON:0001004,7.25e-09,42;UBERON:0000153,1.19e-08,43;UBERON:0002390,3.02e-08,45;UBERON:0003061,3.02e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0,0.171217968225505,0.159544317990673,0.684802919724823,1.13646523144697,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.389762468933385,0.537080087002444,0.596044064343795,1.20195449519969,1.03382669022204,0.908698049533329,1.143102099825,1.51239277705261,0.682205165178267,1.53938946624527,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0,0.171217968225505,0.159544317990673,0.684802919724823,1.13646523144697,0.333109761815663,0,0,0.315462165358238,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.389762468933385,0.537080087002444,0.596044064343795,1.20195449519969,1.03382669022204,0.908698049533329,1.143102099825,1.51239277705261,0.682205165178267,1.53938946624527,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:99605659..99605670,+ | |short_description=p@chr6:99605659..99605670,+ | ||
}} | }} |
Latest revision as of 09:55, 6 August 2015
Short description: | p@chr6:99605659..99605670, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:99605659..99605670, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.32e-14 | 9 |
alpha-beta T cell | 1.32e-14 | 9 |
immature T cell | 1.32e-14 | 9 |
mature T cell | 1.32e-14 | 9 |
immature alpha-beta T cell | 1.32e-14 | 9 |
T cell | 5.16e-12 | 11 |
pro-T cell | 5.16e-12 | 11 |
lymphoid lineage restricted progenitor cell | 4.87e-11 | 12 |
lymphocyte | 3.26e-10 | 13 |
common lymphoid progenitor | 3.26e-10 | 13 |
CD4-positive, alpha-beta T cell | 1.15e-09 | 8 |
regulatory T cell | 1.19e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.19e-09 | 1 |
CD8-positive, alpha-beta T cell | 2.52e-09 | 1 |
leukocyte | 7.13e-08 | 17 |
nongranular leukocyte | 7.13e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-16 | 23 |
neck | 1.78e-16 | 23 |
respiratory system epithelium | 1.78e-16 | 23 |
hemolymphoid system gland | 1.78e-16 | 23 |
pharyngeal epithelium | 1.78e-16 | 23 |
thymic region | 1.78e-16 | 23 |
pharyngeal gland | 1.78e-16 | 23 |
entire pharyngeal arch endoderm | 1.78e-16 | 23 |
thymus primordium | 1.78e-16 | 23 |
early pharyngeal endoderm | 1.78e-16 | 23 |
pharynx | 8.88e-16 | 24 |
gland of gut | 8.88e-16 | 24 |
upper respiratory tract | 8.88e-16 | 24 |
chordate pharynx | 8.88e-16 | 24 |
pharyngeal arch system | 8.88e-16 | 24 |
pharyngeal region of foregut | 8.88e-16 | 24 |
segment of respiratory tract | 5.43e-14 | 27 |
hemopoietic organ | 5.26e-13 | 29 |
immune organ | 5.26e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 1.02e-10 | 35 |
craniocervical region | 2.08e-10 | 36 |
hemolymphoid system | 4.06e-10 | 48 |
immune system | 4.06e-10 | 48 |
lymph node | 9.82e-10 | 1 |
axillary lymph node | 9.82e-10 | 1 |
peripheral lymph node | 9.82e-10 | 1 |
shoulder | 9.82e-10 | 1 |
respiratory tract | 4.31e-09 | 41 |
respiratory system | 7.25e-09 | 42 |
anterior region of body | 1.19e-08 | 43 |
hematopoietic system | 3.02e-08 | 45 |
blood island | 3.02e-08 | 45 |