FFCP PHASE1:Mm9::chr18:65183516..65183557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83814 | |EntrezGene=83814 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0 | |UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0 | ||
|association_with_transcript=335bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end | |association_with_transcript=335bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end | ||
|cluster_id=chr18:65183516..65183557,+ | |||
|description=CAGE_peak_1_at_Nedd4l_5end | |description=CAGE_peak_1_at_Nedd4l_5end | ||
|id=chr18:65183516..65183557,+ | |id=chr18:65183516..65183557,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.42e-12!85;UBERON:0009569!1.05e-11!66;UBERON:0002100!3.17e-09!98;UBERON:0001008!9.02e-09!17;UBERON:0002365!1.09e-08!25;UBERON:0002330!1.09e-08!25;UBERON:0004111!1.67e-08!122;UBERON:0006554!2.15e-08!16;UBERON:0002113!2.71e-08!14;UBERON:0003918!2.71e-08!14;UBERON:0005095!2.71e-08!14;UBERON:0007687!2.71e-08!14;UBERON:0000466!4.17e-08!79;UBERON:0005153!5.20e-08!17;UBERON:0009854!2.50e-07!23;UBERON:0009856!2.50e-07!23;UBERON:0002107!2.64e-07!22;UBERON:0007499!2.64e-07!22;UBERON:0006925!2.64e-07!22;UBERON:0009497!2.64e-07!22;UBERON:0000015!2.64e-07!22;UBERON:0002423!2.64e-07!22;UBERON:0006235!2.64e-07!22;UBERON:0008835!2.64e-07!22;UBERON:0003894!2.64e-07!22;UBERON:0004161!2.64e-07!22;UBERON:0008836!2.64e-07!22;UBERON:0000468!3.59e-07!333;UBERON:0005172!4.89e-07!49;UBERON:0005173!4.89e-07!49;UBERON:0002417!4.89e-07!49;UBERON:0000916!4.89e-07!49;UBERON:0002048!5.42e-07!14;UBERON:0000117!5.42e-07!14;UBERON:0000171!5.42e-07!14;UBERON:0000170!5.42e-07!14;UBERON:0005597!5.42e-07!14;UBERON:0000118!5.42e-07!14 | |ontology_enrichment_uberon=UBERON:0005177!1.42e-12!85;UBERON:0009569!1.05e-11!66;UBERON:0002100!3.17e-09!98;UBERON:0001008!9.02e-09!17;UBERON:0002365!1.09e-08!25;UBERON:0002330!1.09e-08!25;UBERON:0004111!1.67e-08!122;UBERON:0006554!2.15e-08!16;UBERON:0002113!2.71e-08!14;UBERON:0003918!2.71e-08!14;UBERON:0005095!2.71e-08!14;UBERON:0007687!2.71e-08!14;UBERON:0000466!4.17e-08!79;UBERON:0005153!5.20e-08!17;UBERON:0009854!2.50e-07!23;UBERON:0009856!2.50e-07!23;UBERON:0002107!2.64e-07!22;UBERON:0007499!2.64e-07!22;UBERON:0006925!2.64e-07!22;UBERON:0009497!2.64e-07!22;UBERON:0000015!2.64e-07!22;UBERON:0002423!2.64e-07!22;UBERON:0006235!2.64e-07!22;UBERON:0008835!2.64e-07!22;UBERON:0003894!2.64e-07!22;UBERON:0004161!2.64e-07!22;UBERON:0008836!2.64e-07!22;UBERON:0000468!3.59e-07!333;UBERON:0005172!4.89e-07!49;UBERON:0005173!4.89e-07!49;UBERON:0002417!4.89e-07!49;UBERON:0000916!4.89e-07!49;UBERON:0002048!5.42e-07!14;UBERON:0000117!5.42e-07!14;UBERON:0000171!5.42e-07!14;UBERON:0000170!5.42e-07!14;UBERON:0005597!5.42e-07!14;UBERON:0000118!5.42e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.39e-13,79;UBERON:0009569,3.13e-11,66;UBERON:0002100,4.97e-10,90;UBERON:0001008,1.75e-09,19;UBERON:0006554,4.59e-09,18;UBERON:0002113,6.02e-09,14;UBERON:0003918,6.02e-09,14;UBERON:0011143,6.02e-09,14;UBERON:0005095,6.02e-09,14;UBERON:0007687,6.02e-09,14;UBERON:0002365,1.60e-08,25;UBERON:0002330,1.60e-08,25;UBERON:0005153,2.42e-08,17;UBERON:0004111,6.97e-08,122;UBERON:0002048,3.18e-07,14;UBERON:0000117,3.18e-07,14;UBERON:0000171,3.18e-07,14;UBERON:0000170,3.18e-07,14;UBERON:0005597,3.18e-07,14;UBERON:0000118,3.18e-07,14;UBERON:0009854,4.36e-07,23;UBERON:0009856,4.36e-07,23;UBERON:0002107,4.79e-07,22;UBERON:0007499,4.79e-07,22;UBERON:0006925,4.79e-07,22;UBERON:0009497,4.79e-07,22;UBERON:0000015,4.79e-07,22;UBERON:0002423,4.79e-07,22;UBERON:0006235,4.79e-07,22;UBERON:0008835,4.79e-07,22;UBERON:0003894,4.79e-07,22;UBERON:0004161,4.79e-07,22;UBERON:0008836,4.79e-07,22;UBERON:0005172,5.83e-07,49;UBERON:0005173,5.83e-07,49;UBERON:0002417,5.83e-07,49;UBERON:0000916,5.83e-07,49 | |||
|phase1_expression=6.08565618998217,0.348975407639361,0,0.60492842261366,0,4.36486106970913,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6069264241712,0,0,0.95995453676044,0.45881856213434,0.57423196411502,1.29228598847722,0.646413698057667,2.28028103347649,1.26015064879965,0.665191531965914,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,1.10115880999389,12.1302971180928,7.98753972932466,0.527545150920775,1.18933936683133,0.52091337055676,1.3959149950069,3.37657566019008,7.02871939773326,1.17851434189467,1.13897344639282,0.186399445825301,0,0,44.9289957487601,25.8127163094416,25.8389106808945,29.6836755400799,35.0879265421741,20.6092368064774,6.03911006566533,0,0,0,14.9294024963281,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,23.2935114626882,0,0,0,0,1.15307748628029,0.60289056221049,0.705532242814229,0.251333182659351,24.7194967734374,0.144599356919912,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.585561594023094,2.30391377494801,1.78819938646014,0,0,0,5.54225365797844,43.4625572677695,7.28795242254614,25.0307021076878,20.9686675010871,16.2074674756457,22.064811777215,5.70300437561771,15.6752782968717,59.3898482319136,0.631325567659422,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,0.640568601424249,0.937017245597288,1.55222022443409,0,0.567318240503458,0.351902248327898,0,0.556094498451196,0.348252166522167,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,1.07309360559848,0,0.16455984991348,0.164167464079095,0,0,0,0,14.7202963994889,0.308713837137853,2.64335026387038,1.05780226665418,0.853153002140936,0.696710015581316,2.70621668776396,2.8235693447268,3.55804870151792,4.1849637744763,1.89811624617805,3.78807595865225,3.2673577144035,2.58643413653496,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,4.36236172192088,9.48262654660749,27.0498565615393,18.3286195060783,28.511015613641,31.701390590424,34.7800954183415,37.3453674388393,43.0176514285367,43.312404536552,30.2381679628892,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.41177159752417,5.60176873919124,23.8787794084173,32.9134510353322,10.4333337011471,21.5652309791032,20.8398930694362,12.793544597697,20.2063102357689,20.451305141498,28.4641677604387,27.7129785249907,0.37898282354097,3.58522948172457,9.16623463186016,38.7238909676028,94.3060229397423,103.072896503644,71.80918241167,18.9162172927429,14.1737401375216,10.8429242687091,19.99132439532,18.8226630233826,35.5836684110518,0,0,14.7529281905711,25.1102439137307,2.40825884981688,3.16471553798949,0,0.252470927204373,0,0,0,0,0,0,0,0,0,6.42642632843614,4.68402281187286,2.67098405500883,3.09485222771795,11.8778488540226,2.65490276679926,4.12727081463468,3.62788268357701,3.58349651536206,3.54362271456927,6.7635732547664,7.49442050187841,7.63420831902762,6.77345018930971,8.21695570633122,4.21674434299995,2.06271086496374,17.0219802876894,0.18006109403131,0.905510786479282,3.00071849044229,4.07882537377229,5.88617098086833,4.93647061806363,4.87143918583359,5.39744928546534,4.02480934641258,5.29268155331909,3.2977250588296,3.55221738730992,2.71408162176701,2.14870219205646,2.29797259643086,3.49777003955821,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,7.72613975082025,5.72428306355547,4.18176592028937,3.05707589244649,2.29269388854195,1.98368293740806,0,6.61036363788144,16.776161453347,0,0,0,0,0.645799117388655,0,0.58678619322877,1.5624526181274,0.104859344425711,0,1.72818003754719,0.316011120628178,2.43270258348197,2.05421914329655,1.42912905275575,0.537080087002444,0.39736270956253,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.30787728868902,0,0.0897138566094757,2.51826924546118,6.37525660306228,3.94133198447482,17.7657075539247,12.862102744744,36.1131914905462,10.1655331671072,11.5081309126794,13.1765968091061,15.4667864109319,12.3314853558716,11.3309084608455,12.8254275044043,14.4102785031751,14.0474146785103,14.497288729051,0,0.399024873401031,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,8.44537565646138,6.59312183164461,8.98573786857083,8.59170519996911,8.61829619626815,7.9223063382152,9.45779225445812,9.66779801313526,10.7978681636553,5.71552429539688,7.88013416425017,9.64546102318525,7.41754621445952,10.1567254892734,5.82877729055206,7.27650805253284,10.9680647375768,9.01147783120437,10.4461412261017,9.13837765230106,8.23175877927476,12.8904158604543,8.01244271690584,5.61142271657738,7.71127617807132,7.38783617816726,7.36615877705441,7.2820315357404,5.78719832943424,1.24905288968973,7.48581147025307,4.51229213501426,0.382576664137687,1.32354851471709,0.231867835620421 | |phase1_expression=6.08565618998217,0.348975407639361,0,0.60492842261366,0,4.36486106970913,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6069264241712,0,0,0.95995453676044,0.45881856213434,0.57423196411502,1.29228598847722,0.646413698057667,2.28028103347649,1.26015064879965,0.665191531965914,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,1.10115880999389,12.1302971180928,7.98753972932466,0.527545150920775,1.18933936683133,0.52091337055676,1.3959149950069,3.37657566019008,7.02871939773326,1.17851434189467,1.13897344639282,0.186399445825301,0,0,44.9289957487601,25.8127163094416,25.8389106808945,29.6836755400799,35.0879265421741,20.6092368064774,6.03911006566533,0,0,0,14.9294024963281,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,23.2935114626882,0,0,0,0,1.15307748628029,0.60289056221049,0.705532242814229,0.251333182659351,24.7194967734374,0.144599356919912,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.585561594023094,2.30391377494801,1.78819938646014,0,0,0,5.54225365797844,43.4625572677695,7.28795242254614,25.0307021076878,20.9686675010871,16.2074674756457,22.064811777215,5.70300437561771,15.6752782968717,59.3898482319136,0.631325567659422,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,0.640568601424249,0.937017245597288,1.55222022443409,0,0.567318240503458,0.351902248327898,0,0.556094498451196,0.348252166522167,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,1.07309360559848,0,0.16455984991348,0.164167464079095,0,0,0,0,14.7202963994889,0.308713837137853,2.64335026387038,1.05780226665418,0.853153002140936,0.696710015581316,2.70621668776396,2.8235693447268,3.55804870151792,4.1849637744763,1.89811624617805,3.78807595865225,3.2673577144035,2.58643413653496,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,4.36236172192088,9.48262654660749,27.0498565615393,18.3286195060783,28.511015613641,31.701390590424,34.7800954183415,37.3453674388393,43.0176514285367,43.312404536552,30.2381679628892,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.41177159752417,5.60176873919124,23.8787794084173,32.9134510353322,10.4333337011471,21.5652309791032,20.8398930694362,12.793544597697,20.2063102357689,20.451305141498,28.4641677604387,27.7129785249907,0.37898282354097,3.58522948172457,9.16623463186016,38.7238909676028,94.3060229397423,103.072896503644,71.80918241167,18.9162172927429,14.1737401375216,10.8429242687091,19.99132439532,18.8226630233826,35.5836684110518,0,0,14.7529281905711,25.1102439137307,2.40825884981688,3.16471553798949,0,0.252470927204373,0,0,0,0,0,0,0,0,0,6.42642632843614,4.68402281187286,2.67098405500883,3.09485222771795,11.8778488540226,2.65490276679926,4.12727081463468,3.62788268357701,3.58349651536206,3.54362271456927,6.7635732547664,7.49442050187841,7.63420831902762,6.77345018930971,8.21695570633122,4.21674434299995,2.06271086496374,17.0219802876894,0.18006109403131,0.905510786479282,3.00071849044229,4.07882537377229,5.88617098086833,4.93647061806363,4.87143918583359,5.39744928546534,4.02480934641258,5.29268155331909,3.2977250588296,3.55221738730992,2.71408162176701,2.14870219205646,2.29797259643086,3.49777003955821,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,7.72613975082025,5.72428306355547,4.18176592028937,3.05707589244649,2.29269388854195,1.98368293740806,0,6.61036363788144,16.776161453347,0,0,0,0,0.645799117388655,0,0.58678619322877,1.5624526181274,0.104859344425711,0,1.72818003754719,0.316011120628178,2.43270258348197,2.05421914329655,1.42912905275575,0.537080087002444,0.39736270956253,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.30787728868902,0,0.0897138566094757,2.51826924546118,6.37525660306228,3.94133198447482,17.7657075539247,12.862102744744,36.1131914905462,10.1655331671072,11.5081309126794,13.1765968091061,15.4667864109319,12.3314853558716,11.3309084608455,12.8254275044043,14.4102785031751,14.0474146785103,14.497288729051,0,0.399024873401031,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,8.44537565646138,6.59312183164461,8.98573786857083,8.59170519996911,8.61829619626815,7.9223063382152,9.45779225445812,9.66779801313526,10.7978681636553,5.71552429539688,7.88013416425017,9.64546102318525,7.41754621445952,10.1567254892734,5.82877729055206,7.27650805253284,10.9680647375768,9.01147783120437,10.4461412261017,9.13837765230106,8.23175877927476,12.8904158604543,8.01244271690584,5.61142271657738,7.71127617807132,7.38783617816726,7.36615877705441,7.2820315357404,5.78719832943424,1.24905288968973,7.48581147025307,4.51229213501426,0.382576664137687,1.32354851471709,0.2318678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| ||
|short_description=p1@Nedd4l | |short_description=p1@Nedd4l | ||
}} | }} |
Latest revision as of 15:13, 1 October 2015
Short description: | p1@Nedd4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nedd4l_5end |
Coexpression cluster: | NA |
Association with transcript: | 335bp_to_ENSMUST00000080418, ENSMUST00000163809, ENSMUST00000170658, NM_031881, uc008fep.2, uc008feq.2, uc008fer.2_5end |
EntrezGene: | Nedd4l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.39e-13 | 79 |
subdivision of trunk | 3.13e-11 | 66 |
trunk | 4.97e-10 | 90 |
renal system | 1.75e-09 | 19 |
urinary system structure | 4.59e-09 | 18 |
kidney | 6.02e-09 | 14 |
kidney mesenchyme | 6.02e-09 | 14 |
upper urinary tract | 6.02e-09 | 14 |
kidney rudiment | 6.02e-09 | 14 |
kidney field | 6.02e-09 | 14 |
exocrine gland | 1.60e-08 | 25 |
exocrine system | 1.60e-08 | 25 |
epithelial bud | 2.42e-08 | 17 |
anatomical conduit | 6.97e-08 | 122 |
lung | 3.18e-07 | 14 |
respiratory tube | 3.18e-07 | 14 |
respiration organ | 3.18e-07 | 14 |
pair of lungs | 3.18e-07 | 14 |
lung primordium | 3.18e-07 | 14 |
lung bud | 3.18e-07 | 14 |
digestive tract diverticulum | 4.36e-07 | 23 |
sac | 4.36e-07 | 23 |
liver | 4.79e-07 | 22 |
epithelial sac | 4.79e-07 | 22 |
digestive gland | 4.79e-07 | 22 |
epithelium of foregut-midgut junction | 4.79e-07 | 22 |
anatomical boundary | 4.79e-07 | 22 |
hepatobiliary system | 4.79e-07 | 22 |
foregut-midgut junction | 4.79e-07 | 22 |
hepatic diverticulum | 4.79e-07 | 22 |
liver primordium | 4.79e-07 | 22 |
septum transversum | 4.79e-07 | 22 |
liver bud | 4.79e-07 | 22 |
abdomen element | 5.83e-07 | 49 |
abdominal segment element | 5.83e-07 | 49 |
abdominal segment of trunk | 5.83e-07 | 49 |
abdomen | 5.83e-07 | 49 |