FFCP PHASE1:Mm9::chr19:56005954..56005970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56005954..56005970,+ | |||
|description=CAGE_peak_at_chr19:56005954..56005970,+ | |description=CAGE_peak_at_chr19:56005954..56005970,+ | ||
|id=chr19:56005954..56005970,+ | |id=chr19:56005954..56005970,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.93e-19,3;CL:0000117,4.07e-09,23;CL:0000337,4.07e-09,23;CL:0000120,9.29e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.03e-11,5;UBERON:0002435,1.03e-11,5;UBERON:0000204,1.03e-11,5;UBERON:0010082,1.03e-11,5;UBERON:0002420,1.65e-07,8;UBERON:0007245,1.65e-07,8;UBERON:0010009,1.65e-07,8;UBERON:0010011,1.65e-07,8;UBERON:0000454,1.65e-07,8;UBERON:0001044,4.83e-07,1;UBERON:0001736,4.83e-07,1;UBERON:0003293,4.83e-07,1;UBERON:0003294,4.83e-07,1;UBERON:0001829,4.83e-07,1;UBERON:0010047,4.83e-07,1;UBERON:0000167,4.83e-07,1;UBERON:0006298,4.83e-07,1;UBERON:0002259,7.23e-07,1;UBERON:0002314,7.23e-07,1;UBERON:0004061,7.23e-07,1;UBERON:0006777,7.23e-07,1;UBERON:0005882,7.23e-07,1 | |||
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| ||
|short_description=p@chr19:56005954..56005970,+ | |short_description=p@chr19:56005954..56005970,+ | ||
}} | }} |
Latest revision as of 09:05, 4 August 2015
Short description: | p@chr19:56005954..56005970, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56005954..56005970, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.93e-19 | 3 |
CNS neuron (sensu Vertebrata) | 4.07e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.07e-09 | 23 |
granule cell | 9.29e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.03e-11 | 5 |
striatum | 1.03e-11 | 5 |
ventral part of telencephalon | 1.03e-11 | 5 |
future corpus striatum | 1.03e-11 | 5 |
basal ganglion | 1.65e-07 | 8 |
nuclear complex of neuraxis | 1.65e-07 | 8 |
aggregate regional part of brain | 1.65e-07 | 8 |
collection of basal ganglia | 1.65e-07 | 8 |
cerebral subcortex | 1.65e-07 | 8 |
saliva-secreting gland | 4.83e-07 | 1 |
submandibular gland | 4.83e-07 | 1 |
gland of oral region | 4.83e-07 | 1 |
gland of foregut | 4.83e-07 | 1 |
major salivary gland | 4.83e-07 | 1 |
oral gland | 4.83e-07 | 1 |
oral cavity | 4.83e-07 | 1 |
submandibular gland primordium | 4.83e-07 | 1 |
corpora quadrigemina | 7.23e-07 | 1 |
midbrain tectum | 7.23e-07 | 1 |
neural tube mantle layer | 7.23e-07 | 1 |
tectal plate | 7.23e-07 | 1 |
neural tube alar plate | 7.23e-07 | 1 |