FFCP PHASE1:Hg19::chr13:43636277..43636292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43636277..43636292,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr13:43636277..43636292,+ | |description=CAGE_peak_at_chr13:43636277..43636292,+ | ||
|id=chr13:43636277..43636292,+ | |id=chr13:43636277..43636292,+ | ||
|ontology_enrichment_celltype=CL:0000349!9.74e-19!3;CL:0002577!9.74e-19!3;CL:0002541!1.66e-18!3;CL:0002536!4.42e-13!2;CL:0002537!1.01e-11!5;CL:0002178!1.24e-08!3 | |ontology_enrichment_celltype=CL:0000349!9.74e-19!3;CL:0002577!9.74e-19!3;CL:0002541!1.66e-18!3;CL:0002536!4.42e-13!2;CL:0002537!1.01e-11!5;CL:0002178!1.24e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.57e-61;19!CL:0002577;9.24e-36;3!CL:0002536;1.74e-24;2!CL:0002537;2.32e-22;5!CL:0002541;8.90e-17;3!CL:0002097;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.89e-61,19;CL:0002577,7.74e-36,3;CL:0002536,1.64e-24,2;CL:0002537,2.32e-22,5;CL:0002541,9.26e-17,3;CL:0002097,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.15e-13;1!UBERON:0007297;4.83e-07;2 | |||
|ontology_enrichment_disease=DOID:170!2.80e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:170;1.36e-08;6!DOID:4929;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:170,1.42e-08,6;DOID:4929,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.81e-59!14;UBERON:0000158!2.81e-59!14;UBERON:0003124!1.15e-40!7;UBERON:0000478!1.86e-39!24;UBERON:0001987!6.00e-24!4;UBERON:0004340!6.00e-24!4;UBERON:0000305!9.83e-22!7;UBERON:0004871!5.43e-19!8;UBERON:0000476!1.66e-18!3;UBERON:0000920!1.66e-18!3;UBERON:0004923!9.67e-13!57;UBERON:0000998!2.84e-07!1;UBERON:0006868!2.84e-07!1;UBERON:0000473!5.62e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.06e-58;24!UBERON:0005631;1.70e-57;10!UBERON:0000158;1.70e-57;10!UBERON:0000305;1.72e-42;7!UBERON:0001987;5.15e-27;4!UBERON:0003124;8.90e-17;3!UBERON:0000920;8.90e-17;3!UBERON:0000998;8.15e-13;1!UBERON:0006868;8.15e-13;1!UBERON:0004923;1.92e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.62e-83,14;UBERON:0000158,5.62e-83,14;UBERON:0000478,6.69e-58,24;UBERON:0000305,1.65e-42,7;UBERON:0003124,6.41e-42,7;UBERON:0004871,3.25e-37,8;UBERON:0001987,4.51e-27,4;UBERON:0004340,4.51e-27,4;UBERON:0000920,9.26e-17,3;UBERON:0004923,1.03e-16,66;UBERON:0000998,6.06e-13,1;UBERON:0006868,6.06e-13,1;UBERON:0004175,9.33e-08,25 | |||
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|short_description=p@chr13:43636277..43636292,+ | |short_description=p@chr13:43636277..43636292,+ | ||
}} | }} |
Latest revision as of 16:08, 24 July 2015
Short description: | p@chr13:43636277..43636292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43636277..43636292, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.89e-61 | 19 |
placental epithelial cell | 7.74e-36 | 3 |
amniotic epithelial cell | 1.64e-24 | 2 |
amnion mesenchymal stem cell | 2.32e-22 | 5 |
chorionic membrane mesenchymal stem cell | 9.26e-17 | 3 |
cortical cell of adrenal gland | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.62e-83 | 14 |
membranous layer | 5.62e-83 | 14 |
extraembryonic structure | 6.69e-58 | 24 |
amnion | 1.65e-42 | 7 |
chorion | 6.41e-42 | 7 |
somatic layer of lateral plate mesoderm | 3.25e-37 | 8 |
placenta | 4.51e-27 | 4 |
allantois | 4.51e-27 | 4 |
egg chorion | 9.26e-17 | 3 |
organ component layer | 1.03e-16 | 66 |
seminal vesicle | 6.06e-13 | 1 |
seminal fluid secreting gland | 6.06e-13 | 1 |
internal genitalia | 9.33e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.42e-08 | 6 |
tubular adenocarcinoma | 5.28e-07 | 2 |