FFCP PHASE1:Hg19::chr10:118085026..118085031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:118085026..118085031,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:118085026..118085031,+ | |description=CAGE_peak_at_chr10:118085026..118085031,+ | ||
|id=chr10:118085026..118085031,+ | |id=chr10:118085026..118085031,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.38e-65!5;CL:0000540!1.02e-20!6;CL:0000031!1.02e-20!6;CL:0000404!1.02e-20!6;CL:0000039!4.68e-18!7;CL:0000586!4.68e-18!7;CL:0000047!1.05e-15!8;CL:0000148!1.89e-12!10;CL:0000541!1.89e-12!10;CL:0000147!4.68e-09!14;CL:0000133!1.56e-07!59 | |ontology_enrichment_celltype=CL:0002322!2.38e-65!5;CL:0000540!1.02e-20!6;CL:0000031!1.02e-20!6;CL:0000404!1.02e-20!6;CL:0000039!4.68e-18!7;CL:0000586!4.68e-18!7;CL:0000047!1.05e-15!8;CL:0000148!1.89e-12!10;CL:0000541!1.89e-12!10;CL:0000147!4.68e-09!14;CL:0000133!1.56e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.80e-38;7!CL:0000586;1.80e-38;7!CL:0000540;2.45e-12;6!CL:0000404;2.45e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.80e-38,7;CL:0000586,1.80e-38,7;CL:0000540,2.45e-12,6;CL:0000031,2.45e-12,6;CL:0000404,2.45e-12,6;CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.38e-27;10!UBERON:0005564;2.38e-27;10!CL:0000031;2.45e-12;6 | |||
|ontology_enrichment_disease=DOID:3095!4.84e-10!22;DOID:2994!4.84e-10!22 | |ontology_enrichment_disease=DOID:3095!4.84e-10!22;DOID:2994!4.84e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.21e-27!8;UBERON:0003135!9.44e-20!11;UBERON:0000991!1.73e-10!21;UBERON:0009196!1.73e-10!21;UBERON:0009117!1.73e-10!21;UBERON:0005564!1.73e-10!21;UBERON:0004176!5.07e-10!22;UBERON:0003101!5.07e-10!22;UBERON:0000079!5.07e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.68e-34;8!UBERON:0003135;5.49e-25;11!UBERON:0000991;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22!UBERON:0000922;4.46e-07;49!UBERON:0002323;4.46e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0002323,7.52e-07,46 | |||
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|short_description=p@chr10:118085026..118085031,+ | |short_description=p@chr10:118085026..118085031,+ | ||
}} | }} |
Latest revision as of 10:45, 23 July 2015
Short description: | p@chr10:118085026..118085031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:118085026..118085031, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.80e-38 | 7 |
germ cell | 1.80e-38 | 7 |
neuron | 2.45e-12 | 6 |
neuroblast | 2.45e-12 | 6 |
electrically signaling cell | 2.45e-12 | 6 |
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |