FFCP PHASE1:Hg19::chr14:100841856..100841867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7453 | |EntrezGene=7453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |HGNC=12729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000554100,ENST00000555464_5end | |association_with_transcript=16bp_to_ENST00000554100,ENST00000555464_5end | ||
|cluster_id=chr14:100841856..100841867,- | |||
|description=CAGE_peak_6_at_WARS_5end | |description=CAGE_peak_6_at_WARS_5end | ||
|id=chr14:100841856..100841867,- | |id=chr14:100841856..100841867,- | ||
|ontology_enrichment_celltype=CL:0000548!2.85e-17!679;CL:0000004!2.85e-17!679;CL:0000255!2.85e-17!679;CL:0000012!2.99e-16!682;CL:0000144!4.79e-12!625;CL:0000055!8.53e-12!180;CL:0002371!7.61e-11!591;CL:0000222!1.02e-09!119;CL:0002139!3.01e-09!24;CL:0000063!4.80e-08!578;CL:0000003!1.94e-07!722;CL:0000048!4.18e-07!430;CL:0002078!6.20e-07!44;CL:0000115!6.73e-07!35 | |ontology_enrichment_celltype=CL:0000548!2.85e-17!679;CL:0000004!2.85e-17!679;CL:0000255!2.85e-17!679;CL:0000012!2.99e-16!682;CL:0000144!4.79e-12!625;CL:0000055!8.53e-12!180;CL:0002371!7.61e-11!591;CL:0000222!1.02e-09!119;CL:0002139!3.01e-09!24;CL:0000063!4.80e-08!578;CL:0000003!1.94e-07!722;CL:0000048!4.18e-07!430;CL:0002078!6.20e-07!44;CL:0000115!6.73e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.49e-10;24!CL:0000115;9.77e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.43e-10,24;CL:0000115,6.31e-09,36;CL:0002078,1.07e-08,45;CL:0000048,1.13e-08,427;CL:0000222,1.87e-08,121;CL:0000034,2.93e-08,441;CL:0000723,4.98e-08,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.93e-10!69;UBERON:0004872!9.97e-10!84;UBERON:0002049!2.13e-09!79;UBERON:0007798!2.13e-09!79;UBERON:0004535!3.65e-09!110;UBERON:0001009!4.10e-09!113;UBERON:0003081!3.34e-08!216;UBERON:0003914!2.02e-07!118;UBERON:0001981!2.06e-07!60;UBERON:0007500!2.06e-07!60;UBERON:0004537!2.06e-07!60;UBERON:0006965!2.06e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.32e-09,68;UBERON:0004872,6.90e-09,83;UBERON:0002049,3.40e-08,78;UBERON:0007798,3.40e-08,78;UBERON:0004535,6.18e-08,109;UBERON:0001009,7.82e-08,112;UBERON:0003081,1.58e-07,203;UBERON:0000926,2.84e-07,315;UBERON:0004120,2.84e-07,315;UBERON:0006603,2.84e-07,315 | |||
|phase1_expression=3.45188920614058,1.49870366723688,6.20199378022273,0,1.34088328328186,1.74467704820074,0,2.52687949370732,0.522371256399677,0.982935746006035,0,1.09220686065086,0.791300934685361,0.495065411840187,0.331397375727916,0.672325146451775,0,0.730310090387373,1.46379839637152,0.369363174230364,0.204000691244253,3.13454721478088,0.572471974262113,0.821246550437305,0.627713197974014,3.2857764471619,2.8735206307481,3.85682828437028,0.786728553697808,0.767658796194425,1.39334510984468,0,0,0.739508020333575,2.09161441566814,2.27470771979874,0,0,2.4065333696417,0.868043482863407,0,0.32389366601898,0,1.30858414901608,3.02300754951048,1.21292030593908,0.464858073811369,4.11167888021826,4.02618282163635,0.575384784644301,0.256160706529101,1.41889337933151,2.75796544589295,0.645484683583826,0,4.1413314699373,4.09359225086769,4.04502272001152,5.50951006267625,7.70229664982625,5.75403413219137,0,0.997318288108159,1.27867425159808,7.54544020434318,5.10646702222026,3.73693349397345,2.00998932205395,0,0.217188844705117,7.26479403160043,5.52416453981347,4.43047342417238,2.95757400836718,1.27562579979026,1.25795187305026,1.68492946719743,0.600707571366025,1.28580469357664,1.99508920618874,1.79025009479181,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,6.52099065402005,3.97583067623023,6.51739283826656,4.34539556882471,3.1811437882044,1.45990461090791,1.13441780596881,0.443458794925128,1.22968699970376,0.392937226493138,1.09288586487763,0.370784442784429,0.649094787309367,0.696518949197069,1.99436940778298,0.238490624305342,0,0,4.77029777680092,0.860234595106124,3.12426451446835,1.69592382577203,5.03399323451887,3.57653454522088,2.08994966536811,13.4376714768051,12.4518191940349,23.0957222807622,9.66790361061953,10.6438094800592,11.7149787623121,2.94130464276695,1.62028389576352,5.62588288189703,3.59246996201872,3.0405099730497,0,3.79706263827252,2.01521918323448,1.31780417436063,3.87780264148325,0,5.96366342034382,6.45815609489357,4.36950296683622,5.16305917347865,3.54668382198357,2.80338800071154,2.1349799145941,3.45334567784024,1.8672662123986,4.58016285036939,1.14423332179421,0.756787138224657,0,14.5279287736954,0,0,1.49448680551801,0.822041490506354,1.94247533241758,0.140450806702248,0.61246251376468,0.982674538494144,4.54633437173368,4.75201142912821,2.47266929278557,1.82032272387605,2.87447256726495,0.336672227908132,1.50142223846357,0.277064115484183,1.31693286264251,1.22595118319608,4.5071417671979,0.907457465280168,2.69084453533293,4.05759038755278,2.54318281391474,1.50045548042201,4.01904864029912,4.3798891807757,3.90845398296339,4.21940830603166,3.80004320128675,3.28163906517349,4.41839513483037,1.77810662500693,2.84007674013291,1.5112814734146,0.339121184620975,0.193260853163297,0,0,1.95157929807353,3.44577397635862,1.62671520017326,1.96956004529204,1.26160425437814,0.36497735907583,0,0,0,0.464367928031979,1.44375896333917,0.591534000199219,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.98110732562673,1.15424147083917,3.69077727312324,1.40241773803446,0.4115740113314,0,0,0,0,0,0,2.40194934417936,0.329250856225877,1.1240175325762,0.402115889646523,0.277765335475589,12.7065239071027,0,2.88662684050547,1.15930404975077,4.81375646366869,12.5598809552134,11.1116523018387,11.4152491340759,0.790204397959275,0,0.984868024349589,5.85010662848094,2.52672975890838,0,0,0.283550194484773,1.25381931783988,1.16253575405585,0,13.7945706610864,2.99364675644969,0.207328115540772,0,0.25248486685276,0.63497894292169,2.29193055334967,1.17217447210047,1.71072446022705,0.205654985406647,0,0.285826432630578,1.34557301214433,0.43596006883328,0.4400297149257,4.39523833576444,0,0,2.6593811658487,0,0.514414748524284,0,0.799266537048298,7.00592168924923,2.17048642156577,1.64648067356154,1.62868092146868,6.04166312862328,0,1.20575750823834,0.871533458600294,0.299918973546171,2.43247561282381,0.502257091432126,4.21667878966063,4.79249710983165,6.89171615004683,1.42636905040718,1.30303176000821,1.02738161275192,0.716243852959582,0.448340575974109,0,0,0.128343036279748,0,0,0,0.335032530668698,1.27587750330633,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,1.89885516589815,4.57535895367776,4.28229573113188,3.94256037584837,3.04567678981054,3.31040709700491,2.27407504055985,3.10419213877515,3.98535359121262,2.21243002250044,1.73767228936166,0.979005787313703,0,0.82707210449155,0.647142602455851,0.426910231213777,0,1.66435439510497,1.5119514666484,7.69134204238208,9.821566290436,1.96462066103151,9.73857534343327,3.07024349440022,2.2519548960105,0,0.616838775210622,2.13074070375753,1.31403449622095,1.55776328755086,0.697262270759755,0.362578348774867,0,1.38121483403844,8.84071250867472,5.46273504020151,3.67148361886388,2.25599806453706,2.00239876471478,0.784349769176855,0,0,1.13733384070897,5.10281115829547,3.02282282542995,6.169090107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| ||
|short_description=p6@WARS | |short_description=p6@WARS | ||
}} | }} |
Latest revision as of 10:19, 18 September 2015
Short description: | p6@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000554100, ENST00000555464_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.43e-10 | 24 |
endothelial cell | 6.31e-09 | 36 |
meso-epithelial cell | 1.07e-08 | 45 |
multi fate stem cell | 1.13e-08 | 427 |
mesodermal cell | 1.87e-08 | 121 |
stem cell | 2.93e-08 | 441 |
somatic stem cell | 4.98e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.32e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 6.90e-09 | 83 |
vasculature | 3.40e-08 | 78 |
vascular system | 3.40e-08 | 78 |
cardiovascular system | 6.18e-08 | 109 |
circulatory system | 7.82e-08 | 112 |
lateral plate mesoderm | 1.58e-07 | 203 |
mesoderm | 2.84e-07 | 315 |
mesoderm-derived structure | 2.84e-07 | 315 |
presumptive mesoderm | 2.84e-07 | 315 |