FFCP PHASE1:Hg19::chr15:101455085..101455101,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:101455085..101455101,+ | |||
|coexpression_cluster_id=C908 | |||
|description=CAGE_peak_at_chr15:101455085..101455101,+ | |description=CAGE_peak_at_chr15:101455085..101455101,+ | ||
|id=chr15:101455085..101455101,+ | |id=chr15:101455085..101455101,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.62e-13!248;CL:0000220!7.62e-13!246;CL:0000077!1.32e-11!19;CL:0000359!1.25e-10!32;CL:0000222!1.12e-09!119;CL:0000192!1.72e-08!42;CL:0000514!1.72e-08!42;CL:0000066!4.26e-08!254;CL:0000187!5.07e-08!54;CL:0000680!5.63e-08!57;CL:0000056!5.63e-08!57;CL:0000355!5.63e-08!57;CL:0002595!1.42e-07!5;CL:0000076!5.48e-07!62;CL:0000183!8.85e-07!59 | |ontology_enrichment_celltype=CL:0002321!4.62e-13!248;CL:0000220!7.62e-13!246;CL:0000077!1.32e-11!19;CL:0000359!1.25e-10!32;CL:0000222!1.12e-09!119;CL:0000192!1.72e-08!42;CL:0000514!1.72e-08!42;CL:0000066!4.26e-08!254;CL:0000187!5.07e-08!54;CL:0000680!5.63e-08!57;CL:0000056!5.63e-08!57;CL:0000355!5.63e-08!57;CL:0002595!1.42e-07!5;CL:0000076!5.48e-07!62;CL:0000183!8.85e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.73e-19;19!CL:0002593;2.19e-16;2!CL:0002595;2.36e-14;5!CL:0002231;3.08e-11;3!CL:0000359;4.26e-11;32!CL:0002379;3.17e-09;1!CL:0002591;6.98e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.50e-19,19;CL:0002593,3.49e-16,2;CL:0002595,2.77e-14,5;CL:0002231,3.09e-11,3;CL:0000359,6.30e-11,32;CL:0000222,5.65e-10,121;CL:0002379,2.82e-09,1;CL:0002591,8.49e-09,1;CL:0002321,1.31e-08,250;CL:0000192,6.24e-08,43;CL:0000514,6.24e-08,43;CL:0000076,6.66e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.17e-09;1!DOID:3565;3.17e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.82e-09,1;DOID:3565,2.82e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.30e-10!42;UBERON:0003509!1.30e-10!42;UBERON:0004572!1.30e-10!42;UBERON:0000486!4.68e-08!82;UBERON:0004573!1.22e-07!33;UBERON:0004571!1.22e-07!33;UBERON:0003834!1.42e-07!5;UBERON:0001533!1.42e-07!5;UBERON:0002385!3.82e-07!63;UBERON:0001015!3.82e-07!63;UBERON:0000383!3.82e-07!63;UBERON:0001134!5.30e-07!61;UBERON:0002036!5.30e-07!61;UBERON:0003082!5.30e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.19e-16;2!UBERON:0003834;2.36e-14;5!UBERON:0001533;2.36e-14;5!UBERON:0003513;2.08e-10;7!UBERON:0004573;2.97e-10;33!UBERON:0004571;2.97e-10;33!UBERON:0001637;9.49e-07;42!UBERON:0003509;9.49e-07;42!UBERON:0004572;9.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.49e-16,2;UBERON:0003834,2.77e-14,5;UBERON:0001533,2.77e-14,5;UBERON:0004573,1.47e-10,33;UBERON:0004571,1.47e-10,33;UBERON:0001637,1.60e-10,42;UBERON:0003509,1.60e-10,42;UBERON:0004572,1.60e-10,42;UBERON:0003513,2.33e-10,7;UBERON:0007500,3.48e-07,59;UBERON:0001981,3.48e-07,59;UBERON:0004537,3.48e-07,59;UBERON:0006965,3.48e-07,59 | |||
|phase1_expression=0,0.428201047781966,0.704772020479856,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,4.70627602516243,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,1.06400514659507,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42590878707255,3.48613383440118,8.69765023283896,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.0821271560138091,1.55776328755086,0.348631135379878,0,3.00759705454927,1.28913384510255,0.114814448164607,0.182091168006717,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0,0.170453254832202,0.0890320356467374,1.15699440752685,0.768760269460425,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0.842516912477962,0,3.41198885483798,1.05650146756755,0,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11894387131278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,1.04135843001079,0.293977192243133,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,3.52898729547258,0,0,0.447764408660622,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0.453692771289717,0,0.295710299979268,0.63718706865481,1.34940933649081,0.465788870628778,0.414706207840855,0,0.521745061811734,0.901545653983311,5.71207818253193,0,0,0.859284456339908,0,0.796191777397232,0,0,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0.680117776536817,1.15761237161917,0.244736704506468,1.61179956973339,0.308801447160972,4.60496504115285,0.706756583783524,4.05119480368921,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.785181748008205,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0.628776414746108,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.704772020479856,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,4.70627602516243,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,1.06400514659507,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.768251997860379,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42590878707255,3.48613383440118,8.69765023283896,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.0821271560138091,1.55776328755086,0.348631135379878,0,3.00759705454927,1.28913384510255,0.114814448164607,0.182091168006717,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0,0.170453254832202,0.0890320356467374,1.15699440752685,0.768760269460425,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0.842516912477962,0,3.41198885483798,1.05650146756755,0,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11894387131278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,1.04135843001079,0.293977192243133,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,3.52898729547258,0,0,0.447764408660622,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0.453692771289717,0,0.295710299979268,0.63718706865481,1.34940933649081,0.465788870628778,0.414706207840855,0,0.521745061811734,0.901545653983311,5.71207818253193,0,0,0.859284456339908,0,0.796191777397232,0,0,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0.680117776536817,1.15761237161917,0.244736704506468,1.61179956973339,0.308801447160972,4.60496504115285,0.706756583783524,4.05119480368921,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.785181748008205,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p@chr15:101455085..101455101,+ | |short_description=p@chr15:101455085..101455101,+ | ||
}} | }} |
Latest revision as of 00:18, 25 July 2015
Short description: | p@chr15:101455085..101455101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:101455085..101455101, + |
Coexpression cluster: | C908_Mesothelial_mesenchymal_squamous_mesothelioma_mucinous_oral_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.50e-19 | 19 |
smooth muscle cell of the internal thoracic artery | 3.49e-16 | 2 |
smooth muscle cell of the subclavian artery | 2.77e-14 | 5 |
epithelial cell of prostate | 3.09e-11 | 3 |
vascular associated smooth muscle cell | 6.30e-11 | 32 |
mesodermal cell | 5.65e-10 | 121 |
meningothelial cell | 2.82e-09 | 1 |
smooth muscle cell of the pulmonary artery | 8.49e-09 | 1 |
embryonic cell | 1.31e-08 | 250 |
smooth muscle cell | 6.24e-08 | 43 |
smooth muscle myoblast | 6.24e-08 | 43 |
squamous epithelial cell | 6.66e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.49e-16 | 2 |
thoracic segment blood vessel | 2.77e-14 | 5 |
subclavian artery | 2.77e-14 | 5 |
systemic artery | 1.47e-10 | 33 |
systemic arterial system | 1.47e-10 | 33 |
artery | 1.60e-10 | 42 |
arterial blood vessel | 1.60e-10 | 42 |
arterial system | 1.60e-10 | 42 |
trunk blood vessel | 2.33e-10 | 7 |
epithelial tube open at both ends | 3.48e-07 | 59 |
blood vessel | 3.48e-07 | 59 |
blood vasculature | 3.48e-07 | 59 |
vascular cord | 3.48e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.82e-09 | 1 |
meningioma | 2.82e-09 | 1 |