FFCP PHASE1:Hg19::chr10:106009594..106009596,+: Difference between revisions
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|id=chr10:106009594..106009596,+
|short_description=p@chr10:106009594..106009596,+
|description=CAGE_peak_at_chr10:106009594..106009596,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:106009594..106009596,+ | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_at_chr10:106009594..106009596,+ | |||
|id=chr10:106009594..106009596,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.42e-55!42;CL:0000860!3.18e-51!45;CL:0002194!1.56e-39!63;CL:0000576!1.56e-39!63;CL:0000040!1.56e-39!63;CL:0000559!1.56e-39!63;CL:0002009!3.02e-38!65;CL:0000766!3.08e-36!76;CL:0000839!2.42e-35!70;CL:0000557!8.25e-35!71;CL:0000763!1.09e-23!112;CL:0000049!1.09e-23!112;CL:0002087!1.16e-19!119;CL:0002031!9.41e-19!124;CL:0000738!2.40e-18!140;CL:0002032!4.31e-15!165;CL:0000837!4.31e-15!165;CL:0000037!2.39e-14!172;CL:0000566!2.39e-14!172;CL:0000988!2.20e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.41e-43;33!CL:0002057;7.41e-43;33!CL:0000473;1.06e-33;39!CL:0000234;1.06e-33;39!CL:0000576;1.77e-20;48!CL:0000766;3.33e-13;69!CL:0000763;5.36e-12;100!CL:0002087;4.92e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-37,42;CL:0002057,1.56e-37,42;CL:0000473,7.15e-33,48;CL:0000234,7.15e-33,48;CL:0002194,2.45e-26,59;CL:0000576,2.45e-26,59;CL:0000040,2.45e-26,59;CL:0000559,2.45e-26,59;CL:0002009,1.71e-25,61;CL:0000839,1.33e-23,66;CL:0000557,2.94e-23,67;CL:0000766,1.13e-21,72;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0002087,1.16e-13,115;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.41e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-30!80;UBERON:0001474!2.74e-28!86;UBERON:0004765!1.12e-23!101;UBERON:0001434!1.12e-23!101;UBERON:0002390!2.03e-23!102;UBERON:0003061!2.03e-23!102;UBERON:0002193!4.49e-21!112;UBERON:0002405!1.90e-20!115;UBERON:0002204!3.78e-13!167;UBERON:0003081!1.85e-09!216;UBERON:0007190!2.67e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-20,76;UBERON:0001474,4.48e-19,82;UBERON:0004765,2.09e-17,90;UBERON:0002405,7.48e-17,93;UBERON:0002390,5.28e-16,98;UBERON:0003061,5.28e-16,98;UBERON:0001434,1.09e-15,100;UBERON:0002193,1.54e-14,108;UBERON:0002204,2.03e-09,167;UBERON:0003081,9.83e-08,203 | |||
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|short_description=p@chr10:106009594..106009596,+ | |||
}} | }} |
Latest revision as of 10:07, 23 July 2015
Short description: | p@chr10:106009594..106009596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106009594..106009596, + |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-37 | 42 |
defensive cell | 7.15e-33 | 48 |
phagocyte | 7.15e-33 | 48 |
monopoietic cell | 2.45e-26 | 59 |
monocyte | 2.45e-26 | 59 |
monoblast | 2.45e-26 | 59 |
promonocyte | 2.45e-26 | 59 |
macrophage dendritic cell progenitor | 1.71e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.33e-23 | 66 |
granulocyte monocyte progenitor cell | 2.94e-23 | 67 |
myeloid leukocyte | 1.13e-21 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
nongranular leukocyte | 1.16e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-20 | 76 |
bone element | 4.48e-19 | 82 |
skeletal element | 2.09e-17 | 90 |
immune system | 7.48e-17 | 93 |
hematopoietic system | 5.28e-16 | 98 |
blood island | 5.28e-16 | 98 |
skeletal system | 1.09e-15 | 100 |
hemolymphoid system | 1.54e-14 | 108 |
musculoskeletal system | 2.03e-09 | 167 |
lateral plate mesoderm | 9.83e-08 | 203 |