FFCP PHASE1:Hg19::chr11:1940925..1940942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7140 | |EntrezGene=7140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |HGNC=11950 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA37,P45378,C9JCA5 | |UniProt=F8WA37,P45378,C9JCA5 | ||
|association_with_transcript=0bp_to_ENST00000381557,ENST00000381579,ENST00000381589,ENST00000453458_5end | |association_with_transcript=0bp_to_ENST00000381557,ENST00000381579,ENST00000381589,ENST00000453458_5end | ||
|cluster_id=chr11:1940925..1940942,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_1_at_TNNT3_5end | |description=CAGE_peak_1_at_TNNT3_5end | ||
|id=chr11:1940925..1940942,+ | |id=chr11:1940925..1940942,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.80e-11!15;CL:0000188!5.23e-09!9 | |ontology_enrichment_celltype=CL:0000136!1.80e-11!15;CL:0000188!5.23e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.17e-11;9!CL:0000136;5.42e-09;13!CL:0002580;3.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.56e-12,15;CL:0000188,1.15e-11,9;CL:0002580,3.83e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.10e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.37e-15!115;UBERON:0001013!9.30e-07!14 | |ontology_enrichment_uberon=UBERON:0007023!9.37e-15!115;UBERON:0001013!9.30e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.87e-22;16!UBERON:0002036;7.87e-22;16!UBERON:0002385;4.66e-11;31!UBERON:0001015;4.66e-11;31!UBERON:0000383;4.66e-11;31!UBERON:0001443;5.98e-09;11!UBERON:0004151;2.51e-07;3!UBERON:0003978;2.90e-07;3!UBERON:0000946;2.90e-07;3!UBERON:0000310;3.55e-07;10!UBERON:0007100;6.82e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.15e-14,114;UBERON:0001443,5.72e-09,11;UBERON:0004151,2.49e-07,3;UBERON:0003978,2.83e-07,3;UBERON:0009751,2.83e-07,3;UBERON:0000946,2.83e-07,3;UBERON:0002523,2.83e-07,3;UBERON:0005983,2.83e-07,3;UBERON:0002165,2.83e-07,3;UBERON:0002062,2.83e-07,3;UBERON:0007280,2.83e-07,3;UBERON:0000310,3.40e-07,10 | |||
|phase1_expression=11.6274162733156,9.20632252731228,0.563817616383885,0,1.78784437770915,28.7871712953122,2.53299878168311,0,5.48489819219661,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6645756290351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.289693037921647,0,4.37971383272372,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.750711119231785,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.348581828608555,0.932949495138334,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.931655163253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.6031333822758,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,7.6734092533817,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0,4.89502893656851,238.484679548545,0,0,0,0,0,0.30239029332968,8.43566546583841,9.36118037057181,7.57782254969299,0.768834895534206,0.511707249066704,0.160853921143607,5.93672265779964,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,26.971130403502,8.93481979264937,14.5828490989823,13.507984103484,0.966782203814463,13.6315692279375,17.727138502549,1212.34922940162,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0,0,0.42793898803392,0,0,0.539617372749944,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.939385546476,0,0,0,0.71623345421307,0.296964680832639,1.84296421259539,0,0,0,0,0,4.78195171802567,0.276283915531148,0,0,0,0,0,0,0,4.53759665929895,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,7284.19472688381,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0.347119476670262,0,0,58.183980524596,0.171986032471617,0,0,0,99.2197638676531,0,313.88724894416,0.137041924646751,0,0.126621591911757,0,0,0,0.799238438328521,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4505784521624,8.70809611244398,13.6395874669595,16.7730360419153,17.5982679735994,21.4244599144198,115.286838787222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.83927341015997,0,0,0,7.14695326373367,19.8627591109629,0.76280561296425,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,2.98688179689365,0,0,0,0,0,2.1760712134779,3.7603484103405,0.919036730290385,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0,0.624902039810533,0,0,0,0,0,0.149254802886874,0.233713309847224,0,1.7046270474758,5.78606174030923,16.9064132103342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,3.77735275701072,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,4.28308260777463,0,0.353909170043221,0.366857197043358,0,0,0,0,0.300841313397029,0,0,0,0,0,0.337687923091973,0,0,0,0.546974809018219,38.3780436800028,2532.16564332057,0,0,0,0,0,0,1.77404740325278,0,0.342976018874837,0,2.82822926320251,0,0,3.61068227112365,0,0.840816489941367,4.56579360254748,0,0,0.0714765441766563,0,0,3.65102371835417,0,0,0,0,38.720462293825,0,0,0.846774100381858,0,0,0,0,0,0,5893.54470492141,4798.45959246099,11032.1548708889,1411.96185682292,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.874238242015829,0,1.47088993052343,0,0,0,45.6468185790072,0,0,0.257831551894309,0,1.42843150884526,0,0,0.730336388246517,192.666299029907,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0.743990036333503,2.77305377178851,19.0355687334467,0,0.109265571963696,0,0,0,0,0,5.91073846102267,2.94760543171796,0,0,2004.82589783302,1983.79090738735,1.55013383606415,8.06971285846153,0.112131862580613,50.5358436728629,255.678244032147,4516.09850162667,7357.67374003246,128.575069204848,32.5618812482751,1024.26123780518,0.0814032686109745,0,0,0,272.183493188007,1.4668973301944,1.62758471326295,0.665756774185513,128.211406517484,0 | |phase1_expression=11.6274162733156,9.20632252731228,0.563817616383885,0,1.78784437770915,28.7871712953122,2.53299878168311,0,5.48489819219661,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6645756290351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.289693037921647,0,4.37971383272372,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.750711119231785,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.348581828608555,0.932949495138334,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.931655163253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.6031333822758,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,7.6734092533817,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0,4.89502893656851,238.484679548545,0,0,0,0,0,0.30239029332968,8.43566546583841,9.36118037057181,7.57782254969299,0.768834895534206,0.511707249066704,0.160853921143607,5.93672265779964,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,26.971130403502,8.93481979264937,14.5828490989823,13.507984103484,0.966782203814463,13.6315692279375,17.727138502549,1212.34922940162,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0,0,0.42793898803392,0,0,0.539617372749944,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.939385546476,0,0,0,0.71623345421307,0.296964680832639,1.84296421259539,0,0,0,0,0,4.78195171802567,0.276283915531148,0,0,0,0,0,0,0,4.53759665929895,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.461701551022782,0,0,0,0,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,7284.19472688381,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0.347119476670262,0,0,58.183980524596,0.171986032471617,0,0,0,99.2197638676531,0,313.88724894416,0.137041924646751,0,0.126621591911757,0,0,0,0.799238438328521,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4505784521624,8.70809611244398,13.6395874669595,16.7730360419153,17.5982679735994,21.4244599144198,115.286838787222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.83927341015997,0,0,0,7.14695326373367,19.8627591109629,0.76280561296425,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,2.98688179689365,0,0,0,0,0,2.1760712134779,3.7603484103405,0.919036730290385,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0,0.624902039810533,0,0,0,0,0,0.149254802886874,0.233713309847224,0,1.7046270474758,5.78606174030923,16.9064132103342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,3.77735275701072,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,4.28308260777463,0,0.353909170043221,0.366857197043358,0,0,0,0,0.300841313397029,0,0,0,0,0,0.337687923091973,0,0,0,0.546974809018219,38.3780436800028,2532.16564332057,0,0,0,0,0,0,1.77404740325278,0,0.342976018874837,0,2.82822926320251,0,0,3.61068227112365,0,0.840816489941367,4.56579360254748,0,0,0.0714765441766563,0,0,3.65102371835417,0,0,0,0,38.720462293825,0,0,0.846774100381858,0,0,0,0,0,0,5893.54470492141,4798.45959246099,11032.1548708889,1411.96185682292,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.874238242015829,0,1.47088993052343,0,0,0,45.6468185790072,0,0,0.257831551894309,0,1.42843150884526,0,0,0.730336388246517,192.666299029907,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0.743990036333503,2.77305377178851,19.0355687334467,0,0.109265571963696,0,0,0,0,0,5.91073846102267,2.94760543171796,0,0,2004.82589783302,1983.79090738735,1.55013383606415,8.06971285846153,0.112131862580613,50.5358436728629,255.678244032147,4516.09850162667,7357.67374003246,128.575069204848,32.5618812482751,1024.26123780518,0.0814032686109745,0,0,0,272.183493188007,1.4668973301944,1.62758471326295,0.665756774185513,128.211406517484,0 | ||
|short_description=p1@TNNT3 | |short_description=p1@TNNT3 | ||
}} | }} |
Latest revision as of 04:38, 17 September 2015
Short description: | p1@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNNT3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000381557, ENST00000381579, ENST00000381589, ENST00000453458_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | F8WA37P45378C9JCA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.56e-12 | 15 |
cell of skeletal muscle | 1.15e-11 | 9 |
preadipocyte of the breast | 3.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.15e-14 | 114 |
chest | 5.72e-09 | 11 |
cardiac chamber | 2.49e-07 | 3 |
valve | 2.83e-07 | 3 |
cardiac mesenchyme | 2.83e-07 | 3 |
cardial valve | 2.83e-07 | 3 |
tunica intima | 2.83e-07 | 3 |
heart layer | 2.83e-07 | 3 |
endocardium | 2.83e-07 | 3 |
endocardial cushion | 2.83e-07 | 3 |
presumptive endocardium | 2.83e-07 | 3 |
breast | 3.40e-07 | 10 |