FFCP PHASE1:Hg19::chr10:134401859..134401869,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:134401859..134401869,-
|short_description=p@chr10:134401859..134401869,-
|description=CAGE_peak_at_chr10:134401859..134401869,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:134401859..134401869,- | |||
|coexpression_cluster_id=C719 | |||
|description=CAGE_peak_at_chr10:134401859..134401869,- | |||
|id=chr10:134401859..134401869,- | |||
|ontology_enrichment_celltype=CL:0002393!2.36e-46!9;CL:0002397!2.36e-46!9;CL:0002057!6.41e-45!42;CL:0000860!1.26e-41!45;CL:0000766!2.54e-40!76;CL:0000763!2.81e-30!112;CL:0000049!2.81e-30!112;CL:0002009!7.37e-30!65;CL:0002194!6.29e-28!63;CL:0000576!6.29e-28!63;CL:0000040!6.29e-28!63;CL:0000559!6.29e-28!63;CL:0000738!4.34e-27!140;CL:0000557!5.61e-27!71;CL:0000839!9.92e-25!70;CL:0000094!7.35e-24!8;CL:0000037!1.23e-22!172;CL:0000566!1.23e-22!172;CL:0000988!4.77e-21!182;CL:0002032!1.10e-18!165;CL:0000837!1.10e-18!165;CL:0002087!9.64e-18!119;CL:0000081!3.39e-17!11;CL:0000875!6.17e-17!3;CL:0002396!6.17e-17!3;CL:0000767!1.97e-16!3;CL:0000842!3.16e-16!3;CL:0002031!1.48e-13!124;CL:0000224!2.66e-12!4;CL:0000775!2.08e-08!3;CL:0000080!2.35e-08!6;CL:0000134!2.56e-08!358;CL:0002320!4.95e-08!365;CL:0000219!5.04e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;6.51e-34;3!CL:0000094;1.97e-28;8!CL:0000081;6.53e-21;11!CL:0002393;2.19e-17;6!CL:0002397;2.19e-17;6!CL:0000771;1.21e-13;2!CL:0000875;1.10e-09;3!CL:0002396;1.10e-09;3!CL:0000226;1.53e-09;3!CL:0000842;1.53e-09;3!CL:0000766;4.14e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.66e-34,3;CL:0000094,1.64e-28,8;CL:0002393,3.17e-25,9;CL:0002397,3.17e-25,9;CL:0000081,5.70e-21,11;CL:0000766,1.22e-16,72;CL:0000771,1.21e-13,2;CL:0000738,1.45e-11,136;CL:0000763,3.72e-11,108;CL:0000049,3.72e-11,108;CL:0000860,7.23e-10,42;CL:0002057,7.23e-10,42;CL:0000875,1.19e-09,3;CL:0002396,1.19e-09,3;CL:0000226,1.30e-09,3;CL:0000842,1.30e-09,3;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000473,1.10e-08,48;CL:0000234,1.10e-08,48;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0002194,5.10e-07,59;CL:0000576,5.10e-07,59;CL:0000040,5.10e-07,59;CL:0000559,5.10e-07,59;CL:0002009,8.39e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.09e-09;42!CL:0000049;1.59e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-30!102;UBERON:0003061!1.18e-30!102;UBERON:0002193!8.97e-30!112;UBERON:0002371!1.86e-23!80;UBERON:0001474!1.63e-21!86;UBERON:0002405!3.30e-20!115;UBERON:0004765!1.16e-17!101;UBERON:0001434!1.16e-17!101;UBERON:0003081!1.72e-11!216;UBERON:0002204!4.78e-10!167;UBERON:0002384!1.22e-07!375;UBERON:0002106!2.41e-07!3;UBERON:0004854!2.41e-07!3;UBERON:0009034!2.41e-07!3;UBERON:0002095!2.41e-07!3;UBERON:0004782!2.41e-07!3;UBERON:0003281!2.41e-07!3;UBERON:0009664!2.41e-07!3;UBERON:0002296!2.41e-07!3;UBERON:0005602!2.41e-07!3;UBERON:0001179!2.41e-07!3;UBERON:0006293!2.41e-07!3;UBERON:0002426!9.67e-07!1;UBERON:0003831!9.67e-07!1;UBERON:0003898!9.67e-07!1;UBERON:0004830!9.67e-07!1;UBERON:0001774!9.67e-07!1;UBERON:0003830!9.67e-07!1;UBERON:0005175!9.67e-07!1;UBERON:0003897!9.67e-07!1;UBERON:0001103!9.67e-07!1;UBERON:0010084!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0,0,0,0.598390972864896,0,0,0,0,0.502497330513487,0,0,0,0,0,0.845021145247767,1.27562579979026,1.25795187305026,2.47122988522289,0.150176892841506,0.16072558669708,2.28010194992999,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0,0,0,0.598390972864896,0,0,0,0,0.502497330513487,0,0,0,0,0,0.845021145247767,1.27562579979026,1.25795187305026,2.47122988522289,0.150176892841506,0.16072558669708,2.28010194992999,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:134401859..134401869,- | |||
}} | }} |
Latest revision as of 11:47, 23 July 2015
Short description: | p@chr10:134401859..134401869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134401859..134401869, - |
Coexpression cluster: | C719_Neutrophils_CD14CD16_CD14_blood_Eosinophils_Peripheral_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.66e-34 | 3 |
granulocyte | 1.64e-28 | 8 |
intermediate monocyte | 3.17e-25 | 9 |
CD14-positive, CD16-positive monocyte | 3.17e-25 | 9 |
blood cell | 5.70e-21 | 11 |
myeloid leukocyte | 1.22e-16 | 72 |
eosinophil | 1.21e-13 | 2 |
leukocyte | 1.45e-11 | 136 |
myeloid cell | 3.72e-11 | 108 |
common myeloid progenitor | 3.72e-11 | 108 |
classical monocyte | 7.23e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-10 | 42 |
non-classical monocyte | 1.19e-09 | 3 |
CD14-low, CD16-positive monocyte | 1.19e-09 | 3 |
single nucleate cell | 1.30e-09 | 3 |
mononuclear cell | 1.30e-09 | 3 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
defensive cell | 1.10e-08 | 48 |
phagocyte | 1.10e-08 | 48 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
monopoietic cell | 5.10e-07 | 59 |
monocyte | 5.10e-07 | 59 |
monoblast | 5.10e-07 | 59 |
promonocyte | 5.10e-07 | 59 |
macrophage dendritic cell progenitor | 8.39e-07 | 61 |